RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ZBTB39O15060 712 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 APOA4P06727 396 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 CYP3A4P08684 503 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 TCN1P20061 433 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ATXN3P54252 364 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ADCK2Q7Z695 626 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 SEMA4AQ9H3S1 761 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 GBA2Q9HCG7 927 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 ARHGAP26Q9UNA1 814 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 AAR2Q9Y312 384 aaKnown RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
NOD1-201ENST00000222823 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.5
NOD1-201ENST00000222823 CXCL11O14625 94 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 MEIS2O14770 477 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 GLRA3O75311 464 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 JCHAINP01591 159 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 CCND1P24385 295 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 ATP6V1E1P36543 226 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 ZPBP2Q6X784 338 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 TMBIM4Q9HC24 238 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 SEC24DO94855 1032 aaPredicted RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 LCA5LO95447 670 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 CDH18Q13634 790 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 FKBP1CQ5VVH2 108 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 EIF1ADQ8N9N8 165 aaKnown RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 FBXO32Q969P5 355 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 APOL2Q9BQE5 337 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 GANQ9H2C0 597 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 USP20Q9Y2K6 914 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 TIMM44O43615 452 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 SUPT7LO94864 414 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 KLC1Q07866 573 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 LAYNQ6UX15 382 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 CINPQ9BW66 212 aaPredicted RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 ASB7Q9H672 318 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 HEY2Q9UBP5 337 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 PLIN4Q96Q06 1357 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 MYH3P11055 1940 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 BTNL10A8MVZ5 291 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 SERPIND1P05546 499 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 OAZ1P54368 228 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 NFIL3Q16649 462 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 AGAP9Q5VTM2 703 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 SLC26A11Q86WA9 606 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 REPS2Q8NFH8 660 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 VCPIP1Q96JH7 1222 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 PAFAH2Q99487 392 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 APOL5Q9BWW9 433 aa11.9□□□□□ -0.5
NOD1-201ENST00000222823 BARX2Q9UMQ3 279 aaPredicted RBP11.9□□□□□ -0.5
NOD1-201ENST00000222823 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.51
NOD1-201ENST00000222823 RASSF10A6NK89 507 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 ACKR2O00590 384 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 SOAT2O75908 522 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 DGKIO75912 1065 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 FBXO21O94952 628 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 SOX11P35716 441 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 LHX1P48742 406 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 CNTN2Q02246 1040 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 ZBTB17Q13105 803 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 ECM1Q16610 540 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 NLRP9Q7RTR0 991 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.51
NOD1-201ENST00000222823 P2RX7Q99572 595 aaKnown RBP11.9□□□□□ -0.51
NOD1-201ENST00000222823 SHCBP1LQ9BZQ2 653 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 CHST12Q9NRB3 414 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 GID8Q9NWU2 228 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 CPA4Q9UI42 421 aa11.9□□□□□ -0.51
NOD1-201ENST00000222823 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 H0Y626 953 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 RBAK-RBAKDNI3L0D1 243 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 CASP5P51878 434 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 POU4F1Q01851 419 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 BST2Q10589 180 aaKnown RBP11.89□□□□□ -0.51
NOD1-201ENST00000222823 ARHGEF19Q8IW93 802 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 SUGP1Q8IWZ8 645 aaKnown RBP11.89□□□□□ -0.51
NOD1-201ENST00000222823 OTUB1Q96FW1 271 aaPredicted RBP11.89□□□□□ -0.51
NOD1-201ENST00000222823 A1CFQ9NQ94 594 aaKnown RBP11.89□□□□□ -0.51
NOD1-201ENST00000222823 TEKT2Q9UIF3 430 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 TSPAN16Q9UKR8 245 aa11.89□□□□□ -0.51
NOD1-201ENST00000222823 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms