RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Itm2bO89051 266 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 HmbsP22907 361 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fcho1Q8K285 873 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Rreb1Q3UH06 1700 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Nat3P50296 290 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gpd1lQ3ULJ0 351 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cpsf1Q9EPU4 1441 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Abcb11Q9QY30 1321 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cyp2c69E9PXC3 491 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Vmn2r4K7N784 913 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 CrymO54983 313 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pfdn2O70591 154 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Zfyve28Q6ZPK7 905 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pnma2Q8BHK0 365 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tldc1Q8K0P3 455 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ndufaf1Q9CWX2 328 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Prg3Q9JL95 222 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Trappc11B2RXC1 1133 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 NyxP83503 476 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Sugp1Q8CH02 643 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tesk2Q8VCT9 570 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ppp1r3aQ99MR9 1089 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tgm5Q9D7I9 724 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm8050L7N2E3 205 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pak5Q8C015 719 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Dedd2Q8QZV0 330 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Thap2Q9D305 217 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm5407E9Q7Q1 248 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Lin54Q571G4 749 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fam71bQ5STT6 665 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Dpp10Q6NXK7 797 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ddx47Q9CWX9 455 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cbx3P23198 183 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 PvalbP32848 110 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gbx2P48031 348 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Trappc9Q3U0M1 1148 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Islr2Q5RKR3 745 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Plk4Q64702 925 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Q810S2 196 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Guf1Q8C3X4 651 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ncoa5Q91W39 579 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Hars2Q99KK9 505 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Hspbp1Q99P31 357 aaKnown RBP18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 Rgs18Q99PG4 235 aa18.91■□□□□ 0.62
Trim71-201ENSMUST00000111816 NpatQ8BMA5 1420 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 FancfE9Q5Z5 343 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 CartptP56388 129 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Arid5bQ8BM75 1188 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cdhr1Q8VHP6 859 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Chn1Q91V57 459 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mid2Q9QUS6 705 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Zbed6D2EAC2 980 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm3383J3QQ59 259 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm3239L7N2D9 227 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 S100a1P56565 94 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fam49aQ8BHZ0 323 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gpr158Q8C419 1200 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mrpl48Q8JZS9 211 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Sult2a7A0A1B0GRF0 313 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tlr13Q6R5N8 991 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Trnau1apQ80VC6 287 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Btbd10Q80X66 475 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 SvoplQ6PDF3 494 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ces1Q8VCC2 565 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Agap3Q8VHH5 910 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Scaf11E9PZM7 1456 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Atp7aQ64430 1491 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Zbtb7aO88939 569 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 M6prP24668 278 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cdk4P30285 303 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Akt1P31750 480 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 FshrP35378 692 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Abcb9Q9JJ59 762 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Lgals3bpQ07797 577 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tcf4Q60722 670 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Peg10Q7TN75 958 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ppp1r37Q8BKR5 712 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cpne3Q8BT60 533 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 HmcesQ8R1M0 353 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Olfr1494Q8VGP8 315 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Teddm3Q9CQH1 294 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Sgf29Q9DA08 293 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 1700016G14RikA0A286YCZ6 238 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tcea3P23881 347 aaKnown RBP18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 TsxP70675 144 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Vac14Q80WQ2 782 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fmo2Q8K2I3 535 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tmcc3Q8R310 477 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Olfr449Q8VGW8 311 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Atg7Q9D906 698 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ap1s2Q9DB50 160 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Znf318Q99PP2 2237 aa18.9■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tceal7A3KGA4 98 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Olfr693Q8VF89 316 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mlc1Q8VHK5 382 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Slc26a5Q99NH7 744 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Esp31A8R0W3 114 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pde8aO88502 823 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gp1bbP56400 206 aa18.89■□□□□ 0.62
Trim71-201ENSMUST00000111816 PigsQ6PD26 555 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms