RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Hsd17b1P51656 344 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 SPINDOCQ05AH6 381 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ulk3Q3U3Q1 472 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Lrrc55Q3UY51 311 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Tldc1Q8K0P3 455 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 ZwilchQ8R060 589 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ferd3lQ923Z4 168 aa19■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Irf5P56477 497 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Itga4Q00651 1039 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Abi3bpQ59IW6 1179 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gm5414Q6IFZ8 552 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Hmgb4Q6P8W9 181 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 LppQ8BFW7 613 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Rin2Q9D684 903 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Pramef20B1ARV6 477 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Kcnu1O54982 1121 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Mbl1P39039 239 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Lrrc8dQ8BGR2 859 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Olfr1353Q8VGU8 309 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Fam122aQ9DB52 284 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 PorcnQ9JJJ7 461 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Zfp212G3X8R7 492 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Cacna2d1O08532 1103 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 EpoP07321 192 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Usp8Q80U87 1080 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Homer3Q99JP6 356 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ubxn11Q9D572 484 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Oas1eA0A0J9YV76 386 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 TroapB7ZNG4 668 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 GckP52792 465 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 PrlrQ08501 608 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Serpinb6Q60854 378 aa18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Rbmx2Q8R0F5 326 aaKnown RBP18.99■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Serac1Q3U213 654 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Brip1Q5SXJ3 1174 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Suz12Q80U70 741 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Olfml3Q8BK62 406 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Tmem59Q9QY73 323 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Wdr49A0A0N4SUK7 710 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 RargP18911 458 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Kcnq1P97414 668 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Slc9b1Q8C0X2 565 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Zdhhc3Q8R173 299 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Cd300ldQ8VCH2 221 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Nde1Q9CZA6 344 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 MrrfQ9D6S7 262 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 FignQ9ERZ6 759 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 BtkP35991 659 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Mvb12bQ6KAU4 317 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Usp6nlQ80XC3 819 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ddx42Q810A7 929 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Zdhhc12Q8VC90 267 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Tlr6Q9EPW9 795 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gipc2Q9Z2H7 314 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Znf804aA2AKY4 1200 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gm8897L7N294 181 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Rcn1Q05186 325 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Papd7Q6PB75 542 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Pramel7Q810Y8 479 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gpr180Q8BPS4 441 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Pcdhgc5Q91XW9 944 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Asb7Q91ZU0 318 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 ParvbQ9ES46 365 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 RhoaQ9QUI0 193 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Iqcj-Schip1A0A088MLT8 559 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Krt1P04104 637 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Schip1P0DPB4 484 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Crnkl1P63154 690 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Aldh1a2Q62148 518 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Olfr1057Q7TR75 315 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 4921511C20RikQ8BVT7 469 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Osbpl6Q8BXR9 959 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Nipsnap3bQ9CQE1 247 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Fam162aQ9D6U8 155 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ruvbl2Q9WTM5 463 aaKnown RBP18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Kcnd2Q9Z0V2 630 aa18.98■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Sox8Q04886 464 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ndst1Q3UHN9 882 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Frmd5Q6P5H6 517 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gtf2h3Q8VD76 309 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ca9Q8VHB5 437 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Tnip2Q99JG7 430 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Clca1Q9D7Z6 913 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Alg13Q9D8C3 1166 aaKnown RBP18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Atp9aO70228 1047 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Slc26a2Q62273 739 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Fam185aQ7TPD2 378 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Znf569Q80W31 679 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Amigo3Q8C2S7 508 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Kat5Q8CHK4 513 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Trip10Q8CJ53 603 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ndc80Q9D0F1 642 aaKnown RBP18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Gm5930D3Z257 264 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ccdc62E9PVD1 701 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Nr2c2P49117 596 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Ddr2Q62371 854 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Cand2Q6ZQ73 1235 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Wscd1Q80XH4 572 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Fcho1Q8K285 873 aa18.97■□□□□ 0.63
Scaf11-201ENSMUST00000047835 Wee1P47810 646 aa18.97■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms