RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Polr3hQ9D2C6 204 aaKnown RBP12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ankef1Q9D2J7 775 aa12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tjap1Q9DCD5 539 aa12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Lima1Q9ERG0 753 aaKnown RBP12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 CenpkQ9ESN5 271 aa12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Aqp5Q9WTY4 265 aa12.59□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Setd1bQ8CFT2 1985 aa12.58□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Zscan4-ps3A0A1B0GRH6 506 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Zscan4-ps2A0A1C7CYU6 506 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Atp8b5A3FIN4 1183 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Ppp1r36D3Z0R2 411 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm6882J3KMT3 313 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Tnk2O54967 1055 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Sult1e1P49891 295 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Bpifb5Q3UQ05 490 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm10662Q3UT86 313 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Ddx5Q61656 614 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Usp7Q6A4J8 1103 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Prrg3Q6PAQ9 231 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Mindy1Q76LS9 468 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Pdk1Q8BFP9 434 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gsdmc3Q8CB12 480 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Mrpl1Q99N96 336 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Sstr1P30873 391 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Fam89aQ14BJ1 175 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Edem3Q2HXL6 931 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gja3Q64448 417 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Rtl3Q6P1Y1 553 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Tbc1d22bQ80VE5 505 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Fam49aQ8BHZ0 323 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Rps6kl1Q8R2S1 544 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Fbxw7Q8VBV4 629 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Popdc2Q9ES82 367 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 PyglQ9ET01 850 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Fem1bQ9Z2G0 627 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm29276A0A087WNW5 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21117A0A087WPJ9 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm20820A0A087WPP3 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm20937A0A087WQA3 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21258A0A087WQC7 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm28102A0A087WQL3 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21095A0A087WR14 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm20792A0A087WRF5 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21865A0A087WRL2 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm28576A0A087WRP6 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm28490A0A087WRT9 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21294A0A087WS79 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm20824A0A087WS97 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21996A0A087WSS9 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm28870A0A0A6YW38 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm29866A0A0A6YX04 222 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Bpifb9bA2AJD1 591 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Bmp2P21274 394 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Aco1P28271 889 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 OatP29758 439 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 CebpaP53566 359 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Csnk2bP67871 215 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Ptprn2P80560 1001 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Usp39Q3TIX9 564 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Smcr8Q3UMB5 935 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Dync1li2Q6PDL0 492 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Bpifb9aQ80XI7 591 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Rnaseh2bQ80ZV0 308 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm21627Q810R0 219 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Nox1Q8CIZ9 591 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Stau2Q8CJ67 570 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Lrrc42Q8R2U7 421 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Reep2Q8VCD6 254 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 NamptQ99KQ4 491 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Efhc1Q9D9T8 648 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Noa1Q9JJG9 693 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Gm4985A2ALC6 410 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 SprtnG3X912 497 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Sult3a2G5E904 293 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Pdk4O70571 412 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Klra1P20937 262 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 BrafP28028 804 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Oprl1P35377 367 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 NadkP58058 439 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Atf4Q06507 349 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Nlrc4Q3UP24 1024 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Nudcd1Q6PIP5 582 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Scgb2b2Q6UGQ3 114 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 HmcesQ8R1M0 353 aaKnown RBP12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Lars2Q8VDC0 902 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Ergic3Q9CQE7 383 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Rex1bdQ9CYZ6 169 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 TcimQ9D915 106 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Pdk2Q9JK42 407 aa12.58□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 4921501E09RikA0A0R4J054 908 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Slc27a6E9Q9W4 619 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Akap1O08715 857 aaKnown RBP12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Tuba4aP68368 448 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Ptgs2Q05769 604 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Foxn1Q61575 648 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 CrkQ64010 304 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Armcx2Q6A058 784 aaKnown RBP12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Slc9c1Q6UJY2 1175 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Tas2r134Q7TQB0 298 aa12.57□□□□□ -0.4
Pcdhac1-201ENSMUST00000007584 Samd4bQ80XS6 687 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms