RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	OXR1	Q08952	273 aa		6	□□□□□ -1.45
CMR3	YPR013C	DAT1	P13483	248 aa	Known RBP	5.99	□□□□□ -1.45
CMR3	YPR013C	YKL091C	P33324	310 aa	Known RBP	5.99	□□□□□ -1.45
CMR3	YPR013C	EMW1	P42842	904 aa	Known RBP	5.99	□□□□□ -1.45
CMR3	YPR013C	CDC55	Q00362	526 aa		5.99	□□□□□ -1.45
CMR3	YPR013C	GCR2	Q01722	534 aa		5.99	□□□□□ -1.45
CMR3	YPR013C	ISU1	Q03020	165 aa		5.99	□□□□□ -1.45
CMR3	YPR013C	GAR1	P28007	205 aa	Known RBP	5.98	□□□□□ -1.45
CMR3	YPR013C	MNR2	P35724	969 aa		5.98	□□□□□ -1.45
CMR3	YPR013C	RRP14	P36080	434 aa	Known RBP	5.98	□□□□□ -1.45
CMR3	YPR013C	IOC3	P43596	787 aa		5.98	□□□□□ -1.45
CMR3	YPR013C	SUT1	P53032	299 aa	Known RBP	5.98	□□□□□ -1.45
CMR3	YPR013C	YGR122W	P53272	402 aa		5.98	□□□□□ -1.45
CMR3	YPR013C	APP1	P53933	587 aa		5.98	□□□□□ -1.45
CMR3	YPR013C	RPP2B	P02400	110 aa	Known RBP	5.97	□□□□□ -1.45
CMR3	YPR013C	FBP26	P32604	452 aa		5.97	□□□□□ -1.45
CMR3	YPR013C	FPR3	P38911	411 aa	Known RBP	5.97	□□□□□ -1.45
CMR3	YPR013C	PUS5	Q06244	254 aa		5.97	□□□□□ -1.45
CMR3	YPR013C	YDL176W	Q12027	708 aa		5.97	□□□□□ -1.45
CMR3	YPR013C	SSF2	Q12153	453 aa	Predicted RBP	5.97	□□□□□ -1.45
CMR3	YPR013C	CYC8	P14922	966 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
CMR3	YPR013C	MRPL33	P20084	86 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	SMC1	P32908	1225 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	PET112	P33893	541 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	MKS1	P34072	584 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	CIC1	P38779	376 aa	Known RBP	5.96	□□□□□ -1.46
CMR3	YPR013C	CWC24	P53769	259 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	NSE3	Q05541	303 aa		5.96	□□□□□ -1.46
CMR3	YPR013C	CIT2	P08679	460 aa		5.95	□□□□□ -1.46
CMR3	YPR013C	SCD5	P34758	872 aa		5.95	□□□□□ -1.46
CMR3	YPR013C	HXT5	P38695	592 aa		5.95	□□□□□ -1.46
CMR3	YPR013C	SYH1	Q02875	849 aa	Known RBP	5.95	□□□□□ -1.46
CMR3	YPR013C	NOC3	Q07896	663 aa	Predicted RBP	5.95	□□□□□ -1.46
CMR3	YPR013C	MCM1	P11746	286 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	AFT1	P22149	690 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	KTR2	P33550	425 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	ASH1	P34233	588 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	ALG12	P53730	551 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	RPN4	Q03465	531 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	YOR131C	Q12486	218 aa		5.94	□□□□□ -1.46
CMR3	YPR013C	TOP1	P04786	769 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	RAD2	P07276	1031 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	HXT8	P40886	569 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	RSC4	Q02206	625 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	BSC2	Q05611	235 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	CDC53	Q12018	815 aa	Known RBP	5.93	□□□□□ -1.46
CMR3	YPR013C	WTM2	Q12206	467 aa		5.93	□□□□□ -1.46
CMR3	YPR013C	STE6	P12866	1290 aa		5.92	□□□□□ -1.46
CMR3	YPR013C	YPQ2	Q06328	317 aa		5.92	□□□□□ -1.46
CMR3	YPR013C	HXK1	P04806	485 aa	Known RBP	5.91	□□□□□ -1.46
CMR3	YPR013C	VMA3	P25515	160 aa		5.91	□□□□□ -1.46
CMR3	YPR013C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	RIP-Chip
CMR3	YPR013C	LDH1	P38139	375 aa		5.9	□□□□□ -1.46
CMR3	YPR013C	BUD6	P41697	788 aa		5.9	□□□□□ -1.46
CMR3	YPR013C	MRPS18	P42847	217 aa		5.9	□□□□□ -1.46
CMR3	YPR013C	YDR444W	Q04093	687 aa		5.9	□□□□□ -1.46
CMR3	YPR013C	LCB5	Q06147	687 aa	Known RBP	5.9	□□□□□ -1.46
CMR3	YPR013C	BDF2	Q07442	638 aa		5.9	□□□□□ -1.46
CMR3	YPR013C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
CMR3	YPR013C	RAD55	P38953	406 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	FAA3	P39002	694 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	FIR1	P40020	876 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	UTP7	P40055	554 aa	Known RBP	5.89	□□□□□ -1.47
CMR3	YPR013C	MTO1	P53070	669 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	DFG5	Q05031	458 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	TOS4	Q06266	489 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	MCD1	Q12158	566 aa		5.89	□□□□□ -1.47
CMR3	YPR013C	GRX1	P25373	110 aa	Known RBP	5.88	□□□□□ -1.47
CMR3	YPR013C	YHL008C	P38750	627 aa		5.88	□□□□□ -1.47
CMR3	YPR013C	DYS1	P38791	387 aa		5.88	□□□□□ -1.47
CMR3	YPR013C	SUM1	P46676	1062 aa		5.88	□□□□□ -1.47
CMR3	YPR013C	POB3	Q04636	552 aa	Known RBP	5.88	□□□□□ -1.47
CMR3	YPR013C	DAL4	Q04895	635 aa		5.88	□□□□□ -1.47
CMR3	YPR013C	UTP4	Q06679	776 aa	Known RBP	5.88	□□□□□ -1.47
CMR3	YPR013C	INP54	Q08227	384 aa	Known RBP	5.88	□□□□□ -1.47
CMR3	YPR013C	PRE9	P23638	258 aa	Known RBP	5.87	□□□□□ -1.47
CMR3	YPR013C	MRT4	P33201	236 aa	Known RBP	5.87	□□□□□ -1.47
CMR3	YPR013C	IRS4	P36115	615 aa	Known RBP	5.87	□□□□□ -1.47
CMR3	YPR013C	YBL086C	P38177	466 aa		5.87	□□□□□ -1.47
CMR3	YPR013C	DLD3	P39976	496 aa	Known RBP	5.87	□□□□□ -1.47
CMR3	YPR013C	NTA1	P40354	457 aa		5.87	□□□□□ -1.47
CMR3	YPR013C	YJR115W	P47152	169 aa		5.87	□□□□□ -1.47
CMR3	YPR013C	GDE1	Q02979	1223 aa		5.87	□□□□□ -1.47
CMR3	YPR013C	YCS4	Q06156	1176 aa		5.87	□□□□□ -1.47
CMR3	YPR013C	KAR2	P16474	682 aa	Known RBP	5.86	□□□□□ -1.47
CMR3	YPR013C	Q0182	Q9ZZW1	134 aa		5.86	□□□□□ -1.47
CMR3	YPR013C	CDC34	P14682	295 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	TSR4	P25040	408 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	TOM20	P35180	183 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	YBR287W	P38355	427 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	HUL5	P53119	910 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	RTS3	P53289	263 aa		5.85	□□□□□ -1.47
CMR3	YPR013C	MET6	P05694	767 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	MSN1	P22148	382 aa		5.84	□□□□□ -1.47
CMR3	YPR013C	PRP40	P33203	583 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	TAT2	P38967	592 aa		5.84	□□□□□ -1.47
CMR3	YPR013C	PSY2	P40164	858 aa		5.84	□□□□□ -1.47
CMR3	YPR013C	QDR2	P40474	542 aa		5.84	□□□□□ -1.47
CMR3	YPR013C	RGD2	P43556	714 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms