RNA–Protein interactions for RNA: YOR304W

ISW2, Transcript of ATP-dependent DNA translocase involved in chromatin remodeling, yeast

Gene ISW2, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISW2	YOR304W	OPI10	Q08202	246 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	VPS35	P34110	944 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	RSP5	P39940	809 aa	Known RBP	4.7	□□□□□ -1.66
ISW2	YOR304W	POL5	P39985	1022 aa	Known RBP	4.7	□□□□□ -1.66
ISW2	YOR304W	AIM9	P40053	627 aa	Known RBP	4.7	□□□□□ -1.66
ISW2	YOR304W	MSH4	P40965	878 aa	Predicted RBP	4.7	□□□□□ -1.66
ISW2	YOR304W	GPG1	P53130	126 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	FLC1	Q08967	793 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	PRI2	P20457	528 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	UTP14	Q04500	899 aa	Known RBP	4.7	□□□□□ -1.66
ISW2	YOR304W	HDA3	Q06623	655 aa		4.7	□□□□□ -1.66
ISW2	YOR304W	STR2	P47164	639 aa		4.69	□□□□□ -1.66
ISW2	YOR304W	MRC1	P25588	1096 aa		4.69	□□□□□ -1.66
ISW2	YOR304W	RPA14	P50106	137 aa		4.69	□□□□□ -1.66
ISW2	YOR304W	TMA64	Q04600	565 aa	Known RBP	4.69	□□□□□ -1.66
ISW2	YOR304W	HTA1	P04911	132 aa	Known RBP	4.68	□□□□□ -1.66
ISW2	YOR304W	HTA2	P04912	132 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	GUT2	P32191	649 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	PEP7	P32609	515 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	UGA4	P32837	571 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	ERP2	P39704	215 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	YNL011C	P53980	444 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	RSC4	Q02206	625 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	COG4	Q06096	861 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	SRM1	P21827	482 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	ISC10	P32645	267 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	GRX7	P38068	203 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
ISW2	YOR304W	PFD1	P46988	109 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	MPC54	Q08550	464 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	YOR131C	Q12486	218 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	TRS33	Q99394	268 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
ISW2	YOR304W	HXT5	P38695	592 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	EEB1	Q02891	456 aa		4.68	□□□□□ -1.66
ISW2	YOR304W	NUD1	P32336	851 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	NTH2	P35172	780 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	MID1	P41821	548 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	UFD2	P54860	961 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	ESC2	Q06340	456 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	CCP1	P00431	361 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	CAN1	P04817	590 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	GCD6	P32501	712 aa	Known RBP	4.67	□□□□□ -1.66
ISW2	YOR304W	HOS4	P40480	1083 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	SET4	P42948	560 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	NTG2	Q08214	380 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	TOA1	P32773	286 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	SNF7	P39929	240 aa	Known RBP	4.67	□□□□□ -1.66
ISW2	YOR304W	PIC2	P40035	300 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	GNP1	P48813	663 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	YGR021W	P53212	290 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	DPL1	Q05567	589 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	YLR125W	Q12138	136 aa		4.67	□□□□□ -1.66
ISW2	YOR304W	CIT1	P00890	479 aa		4.66	□□□□□ -1.66
ISW2	YOR304W	DPS1	P04802	557 aa	Known RBP	4.66	□□□□□ -1.66
ISW2	YOR304W	PDC1	P06169	563 aa	Known RBP	4.66	□□□□□ -1.66
ISW2	YOR304W	PRE9	P23638	258 aa	Known RBP	4.66	□□□□□ -1.66
ISW2	YOR304W	ISR1	Q06098	443 aa	Known RBP	4.66	□□□□□ -1.66
ISW2	YOR304W	ATG13	Q06628	738 aa		4.66	□□□□□ -1.66
ISW2	YOR304W	VAC17	P25591	423 aa		4.66	□□□□□ -1.66
ISW2	YOR304W	TIM54	P47045	478 aa		4.66	□□□□□ -1.66
ISW2	YOR304W	ISM1	P48526	1002 aa		4.65	□□□□□ -1.66
ISW2	YOR304W	SLX4	Q12098	748 aa		4.65	□□□□□ -1.66
ISW2	YOR304W	TMA17	Q12513	150 aa		4.65	□□□□□ -1.66
ISW2	YOR304W	ADR1	P07248	1323 aa		4.65	□□□□□ -1.66
ISW2	YOR304W	CEF1	Q03654	590 aa	Predicted RBP	4.65	□□□□□ -1.66
ISW2	YOR304W	BDS1	Q08347	646 aa		4.65	□□□□□ -1.66
ISW2	YOR304W	THI4	P32318	326 aa		4.65	□□□□□ -1.67
ISW2	YOR304W	PAC1	P39946	494 aa	Known RBP	4.65	□□□□□ -1.67
ISW2	YOR304W	PEX21	P50091	288 aa		4.65	□□□□□ -1.67
ISW2	YOR304W	RTA1	P53047	317 aa		4.65	□□□□□ -1.67
ISW2	YOR304W	FOX2	Q02207	900 aa	Known RBP	4.65	□□□□□ -1.67
ISW2	YOR304W	TDA5	Q06417	326 aa	Known RBP	4.65	□□□□□ -1.67
ISW2	YOR304W	MSH2	P25847	964 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	CTR9	P89105	1077 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	NAN1	Q02931	896 aa	Known RBP	4.64	□□□□□ -1.67
ISW2	YOR304W	COB	P00163	385 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	GCR1	P07261	785 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	SWI5	P08153	709 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	MPH2	P0CD99	609 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	MKK2	P32491	506 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	BET3	P36149	193 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	PTC4	P38089	393 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	TGL3	P40308	642 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	ATG3	P40344	310 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	RPS6A	P0CX37	236 aa	Known RBP	4.64	□□□□□ -1.67
ISW2	YOR304W	RPS6B	P0CX38	236 aa	Predicted RBP	4.64	□□□□□ -1.67
ISW2	YOR304W	RPL8B	P29453	256 aa	Known RBP	4.64	□□□□□ -1.67
ISW2	YOR304W	YBR184W	P38299	523 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	SND1	Q04007	877 aa		4.64	□□□□□ -1.67
ISW2	YOR304W	CYT1	P07143	309 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	YGL015C	P33199	130 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	COG6	P53959	839 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	RPP1B	P10622	106 aa	Known RBP	4.63	□□□□□ -1.67
ISW2	YOR304W	HEM13	P11353	328 aa	Known RBP	4.63	□□□□□ -1.67
ISW2	YOR304W	SEA4	P38164	1038 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	GPP1	P41277	250 aa	Known RBP	4.63	□□□□□ -1.67
ISW2	YOR304W	CWC24	P53769	259 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	TBF1	Q02457	562 aa		4.63	□□□□□ -1.67
ISW2	YOR304W	TAF8	Q03750	510 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms