RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C BDF2Q07442 638 aa3.34□□□□□ -1.87
DNL4YOR005C MNR2P35724 969 aa3.34□□□□□ -1.87
DNL4YOR005C TAT2P38967 592 aa3.34□□□□□ -1.87
DNL4YOR005C RPS26AP39938 119 aaKnown RBP3.34□□□□□ -1.87
DNL4YOR005C RPS26BP39939 119 aaKnown RBP3.34□□□□□ -1.87
DNL4YOR005C UFD2P54860 961 aa3.34□□□□□ -1.87
DNL4YOR005C ISR1Q06098 443 aaKnown RBP3.34□□□□□ -1.87
DNL4YOR005C ESF1Q06344 628 aaKnown RBP3.34□□□□□ -1.87
DNL4YOR005C CYC8P14922 966 aa3.34□□□□□ -1.88
DNL4YOR005C GCD6P32501 712 aaKnown RBP3.34□□□□□ -1.88
DNL4YOR005C YGR122WP53272 402 aa3.34□□□□□ -1.88
DNL4YOR005C POB3Q04636 552 aaKnown RBP3.34□□□□□ -1.88
DNL4YOR005C CYT1P07143 309 aa3.33□□□□□ -1.88
DNL4YOR005C ISC10P32645 267 aa3.33□□□□□ -1.88
DNL4YOR005C KTR2P33550 425 aa3.33□□□□□ -1.88
DNL4YOR005C MTO1P53070 669 aa3.33□□□□□ -1.88
DNL4YOR005C RPB10P22139 70 aa3.33□□□□□ -1.88
DNL4YOR005C GCD11P32481 527 aaKnown RBP3.33□□□□□ -1.88
DNL4YOR005C PEP7P32609 515 aa3.33□□□□□ -1.88
DNL4YOR005C GRX4P32642 244 aa3.33□□□□□ -1.88
DNL4YOR005C PAC1P39946 494 aaKnown RBP3.33□□□□□ -1.88
DNL4YOR005C SUB1P54000 292 aaKnown RBP3.33□□□□□ -1.88
DNL4YOR005C CAB1Q04430 367 aa3.33□□□□□ -1.88
DNL4YOR005C CDC53Q12018 815 aaKnown RBP3.33□□□□□ -1.88
DNL4YOR005C RPS6AP0CX37 236 aaKnown RBP3.32□□□□□ -1.88
DNL4YOR005C RPS6BP0CX38 236 aaPredicted RBP3.32□□□□□ -1.88
DNL4YOR005C SSB1P11484 613 aaKnown RBP3.32□□□□□ -1.88
DNL4YOR005C TPD3P31383 635 aa3.32□□□□□ -1.88
DNL4YOR005C SSB2P40150 613 aaKnown RBP3.32□□□□□ -1.88
DNL4YOR005C ARH1P48360 493 aa3.32□□□□□ -1.88
DNL4YOR005C PET112P33893 541 aa3.32□□□□□ -1.88
DNL4YOR005C XDJ1P39102 459 aa3.32□□□□□ -1.88
DNL4YOR005C HXT10P43581 546 aa3.32□□□□□ -1.88
DNL4YOR005C YGL081WP53156 320 aa3.32□□□□□ -1.88
DNL4YOR005C KXD1P53158 218 aa3.32□□□□□ -1.88
DNL4YOR005C YNL011CP53980 444 aa3.32□□□□□ -1.88
DNL4YOR005C CDC55Q00362 526 aa3.32□□□□□ -1.88
DNL4YOR005C TOS4Q06266 489 aa3.32□□□□□ -1.88
DNL4YOR005C BUD20Q08004 166 aaPredicted RBP3.32□□□□□ -1.88
DNL4YOR005C PPM2Q08282 695 aa3.32□□□□□ -1.88
DNL4YOR005C YOR131CQ12486 218 aa3.32□□□□□ -1.88
DNL4YOR005C SPT23P35210 1082 aa3.31□□□□□ -1.88
DNL4YOR005C BDS1Q08347 646 aa3.31□□□□□ -1.88
DNL4YOR005C UFD4P33202 1483 aa3.31□□□□□ -1.88
DNL4YOR005C HXK1P04806 485 aaKnown RBP3.31□□□□□ -1.88
DNL4YOR005C RAD2P07276 1031 aa3.31□□□□□ -1.88
DNL4YOR005C SWI5P08153 709 aa3.31□□□□□ -1.88
DNL4YOR005C SAM37P50110 327 aa3.31□□□□□ -1.88
DNL4YOR005C SRC1Q03707 834 aa3.31□□□□□ -1.88
DNL4YOR005C GRX1P25373 110 aaKnown RBP3.3□□□□□ -1.88
DNL4YOR005C MNN1P39106 762 aa3.3□□□□□ -1.88
DNL4YOR005C ATG20Q07528 640 aa3.3□□□□□ -1.88
DNL4YOR005C HUL5P53119 910 aa3.3□□□□□ -1.88
DNL4YOR005C CWC24P53769 259 aa3.3□□□□□ -1.88
DNL4YOR005C RSC4Q02206 625 aa3.3□□□□□ -1.88
DNL4YOR005C VPS72Q03388 795 aa3.3□□□□□ -1.88
DNL4YOR005C OXR1Q08952 273 aa3.3□□□□□ -1.88
DNL4YOR005C BUD4P47136 1447 aa3.3□□□□□ -1.88
DNL4YOR005C MET6P05694 767 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C RRD1P40454 393 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C YJR142WP47173 342 aa3.29□□□□□ -1.88
DNL4YOR005C FOX2Q02207 900 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C YGR161W-CQ3E744 92 aa3.29□□□□□ -1.88
DNL4YOR005C HXT5P38695 592 aa3.29□□□□□ -1.88
DNL4YOR005C UBP12P39538 1254 aa3.29□□□□□ -1.88
DNL4YOR005C NUP82P40368 713 aa3.29□□□□□ -1.88
DNL4YOR005C UTP14Q04500 899 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C CIC1P38779 376 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C FAA3P39002 694 aa3.29□□□□□ -1.88
DNL4YOR005C PTC2P39966 464 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C SUT1P53032 299 aaKnown RBP3.29□□□□□ -1.88
DNL4YOR005C DPS1P04802 557 aaKnown RBP3.28□□□□□ -1.88
DNL4YOR005C MRPL33P20084 86 aa3.28□□□□□ -1.88
DNL4YOR005C TPM2P40414 161 aa3.28□□□□□ -1.88
DNL4YOR005C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
DNL4YOR005C YRB30P53107 440 aaPredicted RBP3.28□□□□□ -1.88
DNL4YOR005C HAP5Q02516 242 aa3.28□□□□□ -1.88
DNL4YOR005C NOC3Q07896 663 aaPredicted RBP3.28□□□□□ -1.88
DNL4YOR005C YPR015CQ12531 247 aa3.28□□□□□ -1.88
DNL4YOR005C SPP41P38904 1435 aa3.28□□□□□ -1.88
DNL4YOR005C MMS1Q06211 1407 aa3.28□□□□□ -1.88
DNL4YOR005C MOD5P07884 428 aa3.28□□□□□ -1.88
DNL4YOR005C RAD4P14736 754 aa3.28□□□□□ -1.88
DNL4YOR005C RRN7P40992 514 aa3.28□□□□□ -1.88
DNL4YOR005C FAA4P47912 694 aaKnown RBP3.28□□□□□ -1.88
DNL4YOR005C YGR053CP53234 283 aa3.28□□□□□ -1.88
DNL4YOR005C TPO2P53283 614 aa3.28□□□□□ -1.88
DNL4YOR005C GDE1Q02979 1223 aa3.28□□□□□ -1.88
DNL4YOR005C STU1P38198 1513 aa3.28□□□□□ -1.89
DNL4YOR005C CDC34P14682 295 aa3.27□□□□□ -1.89
DNL4YOR005C SMC1P32908 1225 aa3.27□□□□□ -1.89
DNL4YOR005C DUT1P33317 147 aa3.27□□□□□ -1.89
DNL4YOR005C SPF1P39986 1215 aaKnown RBP3.27□□□□□ -1.89
DNL4YOR005C BUD21Q08492 214 aaPredicted RBP3.27□□□□□ -1.89
DNL4YOR005C TAF2P23255 1407 aa3.27□□□□□ -1.89
DNL4YOR005C PRT1P06103 763 aaKnown RBP3.27□□□□□ -1.89
DNL4YOR005C PRE9P23638 258 aaKnown RBP3.27□□□□□ -1.89
DNL4YOR005C UTR2P32623 467 aa3.27□□□□□ -1.89
DNL4YOR005C YHR020WP38708 688 aaKnown RBP3.27□□□□□ -1.89
DNL4YOR005C NAN1Q02931 896 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms