RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W WRS1Q12109 432 aaKnown RBP13.2□□□□□ -0.3
PRE6YOL038W CSR2Q12734 1121 aa13.2□□□□□ -0.3
PRE6YOL038W YJL171CP46992 396 aa13.19□□□□□ -0.3
PRE6YOL038W SNU66Q12420 587 aaPredicted RBP13.19□□□□□ -0.3
PRE6YOL038W RVB2Q12464 471 aaKnown RBP13.18□□□□□ -0.3
PRE6YOL038W RPS19AP07280 144 aaKnown RBP13.17□□□□□ -0.3
PRE6YOL038W RPS19BP07281 144 aaPredicted RBP13.17□□□□□ -0.3
PRE6YOL038W AI2P03876 854 aa13.16□□□□□ -0.3
PRE6YOL038W TIF6Q12522 245 aaKnown RBP13.16□□□□□ -0.3
PRE6YOL038W PCS60P38137 543 aaKnown RBP RIP-Chip data13.15□□□□□ -0.3not detected
PRE6YOL038W GLO3P38682 493 aaKnown RBP13.15□□□□□ -0.3
PRE6YOL038W JJJ2P46997 583 aa13.15□□□□□ -0.3
PRE6YOL038W FLO1P32768 1537 aa13.13□□□□□ -0.31
PRE6YOL038W SEC18P18759 758 aaKnown RBP13.13□□□□□ -0.31
PRE6YOL038W NUG1P40010 520 aaKnown RBP13.13□□□□□ -0.31
PRE6YOL038W YIL092WP40497 633 aa13.13□□□□□ -0.31
PRE6YOL038W YFH7P43591 353 aa13.13□□□□□ -0.31
PRE6YOL038W CDC45Q08032 650 aa13.13□□□□□ -0.31
PRE6YOL038W SRF1Q12516 437 aa13.13□□□□□ -0.31
PRE6YOL038W BSD2P38356 321 aa13.12□□□□□ -0.31
PRE6YOL038W ILV3P39522 585 aaKnown RBP13.12□□□□□ -0.31
PRE6YOL038W YIR042CP40586 236 aa13.12□□□□□ -0.31
PRE6YOL038W ACK1Q07622 623 aaPredicted RBP13.12□□□□□ -0.31
PRE6YOL038W VPS13Q07878 3144 aa13.12□□□□□ -0.31
PRE6YOL038W SUP35P05453 685 aaKnown RBP13.11□□□□□ -0.31
PRE6YOL038W DAL5P15365 543 aa13.11□□□□□ -0.31
PRE6YOL038W MOT2P34909 587 aaKnown RBP13.11□□□□□ -0.31
PRE6YOL038W MAK21Q12176 1025 aaKnown RBP13.11□□□□□ -0.31
PRE6YOL038W HAL5P38970 855 aaKnown RBP13.1□□□□□ -0.31
PRE6YOL038W RRT6P53117 311 aaPredicted RBP13.1□□□□□ -0.31
PRE6YOL038W NSG2P53898 299 aa13.1□□□□□ -0.31
PRE6YOL038W CST9Q06032 482 aa13.1□□□□□ -0.31
PRE6YOL038W GYP5Q12344 894 aa13.1□□□□□ -0.31
PRE6YOL038W SNF3P10870 884 aa13.09□□□□□ -0.31
PRE6YOL038W KEL1P38853 1164 aaKnown RBP13.09□□□□□ -0.31
PRE6YOL038W NIT1P40447 199 aa13.09□□□□□ -0.31
PRE6YOL038W YNL193WP53870 558 aa13.09□□□□□ -0.31
PRE6YOL038W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.08□□□□□ -0.32not detected
PRE6YOL038W INM2Q05533 292 aa13.08□□□□□ -0.32
PRE6YOL038W RPN7Q06103 429 aaKnown RBP13.08□□□□□ -0.32
PRE6YOL038W SDH2P21801 266 aa13.07□□□□□ -0.32
PRE6YOL038W PUS6P53294 404 aa13.07□□□□□ -0.32
PRE6YOL038W PEX29Q03370 554 aa13.07□□□□□ -0.32
PRE6YOL038W PSF3Q12146 194 aa13.07□□□□□ -0.32
PRE6YOL038W PTK1P36002 662 aaPredicted RBP13.06□□□□□ -0.32
PRE6YOL038W APE3P37302 537 aaKnown RBP13.06□□□□□ -0.32
PRE6YOL038W PFK2P16862 959 aaKnown RBP RIP-Chip data13.05□□□□□ -0.32not detected
PRE6YOL038W NCS6P53088 359 aa13.04□□□□□ -0.32
PRE6YOL038W SPO1P53541 631 aa13.04□□□□□ -0.32
PRE6YOL038W GCD7P32502 381 aaPredicted RBP13.03□□□□□ -0.32
PRE6YOL038W KTR3P38130 404 aaPredicted RBP13.03□□□□□ -0.32
PRE6YOL038W PPM2Q08282 695 aa13.03□□□□□ -0.32
PRE6YOL038W YNG2P38806 282 aaKnown RBP13.02□□□□□ -0.33
PRE6YOL038W APL6P46682 809 aa13.02□□□□□ -0.33
PRE6YOL038W RBA50Q04418 439 aa13.02□□□□□ -0.33
PRE6YOL038W PIB1Q06651 286 aa13.02□□□□□ -0.33
PRE6YOL038W GAL2P13181 574 aa13.01□□□□□ -0.33
PRE6YOL038W RAD53P22216 821 aa13.01□□□□□ -0.33
PRE6YOL038W ASH1P34233 588 aa12.99□□□□□ -0.33
PRE6YOL038W RRI2Q12348 645 aa12.99□□□□□ -0.33
PRE6YOL038W MDL2P33311 773 aa12.98□□□□□ -0.33
PRE6YOL038W PAM1P37304 830 aaKnown RBP12.98□□□□□ -0.33
PRE6YOL038W GRX7P38068 203 aa12.98□□□□□ -0.33
PRE6YOL038W SSF1P38789 453 aaPredicted RBP12.98□□□□□ -0.33
PRE6YOL038W FUN12P39730 1002 aaKnown RBP12.98□□□□□ -0.33
PRE6YOL038W GIN4Q12263 1142 aa12.98□□□□□ -0.33
PRE6YOL038W ADP1P25371 1049 aa12.97□□□□□ -0.33
PRE6YOL038W RSC30P38781 883 aa12.96□□□□□ -0.33
PRE6YOL038W JIP4Q03361 876 aa12.96□□□□□ -0.33
PRE6YOL038W PMA1P05030 918 aaKnown RBP12.95□□□□□ -0.34
PRE6YOL038W YRB30P53107 440 aaPredicted RBP12.95□□□□□ -0.34
PRE6YOL038W TUB2P02557 457 aaKnown RBP12.94□□□□□ -0.34
PRE6YOL038W AAD16Q02895 342 aa12.94□□□□□ -0.34
PRE6YOL038W PIF1P07271 859 aa12.93□□□□□ -0.34
PRE6YOL038W PRS1P32895 427 aaKnown RBP12.93□□□□□ -0.34
PRE6YOL038W TPS3P38426 1054 aaKnown RBP12.93□□□□□ -0.34
PRE6YOL038W HGH1P48362 394 aaKnown RBP12.92□□□□□ -0.34
PRE6YOL038W RAD2P07276 1031 aa12.91□□□□□ -0.34
PRE6YOL038W SPT21P35209 758 aa12.91□□□□□ -0.34
PRE6YOL038W SGD1Q06132 899 aa12.91□□□□□ -0.34
PRE6YOL038W YDJ1P25491 409 aaKnown RBP12.9□□□□□ -0.34
PRE6YOL038W IXR1P33417 597 aa12.9□□□□□ -0.34
PRE6YOL038W MAC1P35192 417 aa12.9□□□□□ -0.34
PRE6YOL038W BOI1P38041 980 aaKnown RBP12.9□□□□□ -0.34
PRE6YOL038W ACA1P39970 489 aa12.9□□□□□ -0.34
PRE6YOL038W EPS1P40557 701 aa12.9□□□□□ -0.34
PRE6YOL038W YLR225CQ05948 407 aaKnown RBP12.9□□□□□ -0.34
PRE6YOL038W YBL028CP38202 106 aa12.89□□□□□ -0.35
PRE6YOL038W BDP1P46678 594 aa12.89□□□□□ -0.35
PRE6YOL038W POL32P47110 350 aa12.89□□□□□ -0.35
PRE6YOL038W YGL242CP53066 181 aa12.89□□□□□ -0.35
PRE6YOL038W PUF6Q04373 656 aaKnown RBP12.89□□□□□ -0.35
PRE6YOL038W PCL8Q08966 492 aa12.89□□□□□ -0.35
PRE6YOL038W KIN1P13185 1064 aa12.88□□□□□ -0.35
PRE6YOL038W ALO1P54783 526 aaKnown RBP12.88□□□□□ -0.35
PRE6YOL038W CYB2P00175 591 aa12.87□□□□□ -0.35
PRE6YOL038W PIP2P52960 996 aa12.87□□□□□ -0.35
PRE6YOL038W NOT3P06102 836 aaKnown RBP12.86□□□□□ -0.35
PRE6YOL038W SPR3P41901 512 aa12.86□□□□□ -0.35
PRE6YOL038W TAO3P40468 2376 aa12.85□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms