RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C PGM2P37012 569 aaKnown RBP7.66□□□□□ -1.18
VPS20YMR077C PRK1P40494 810 aa7.66□□□□□ -1.18
VPS20YMR077C PRY1P47032 299 aa7.66□□□□□ -1.18
VPS20YMR077C CUS1Q02554 436 aaPredicted RBP7.65□□□□□ -1.18
VPS20YMR077C HXT5P38695 592 aa7.64□□□□□ -1.19
VPS20YMR077C APM2P38700 605 aa7.64□□□□□ -1.19
VPS20YMR077C YPL034WQ03083 165 aa7.64□□□□□ -1.19
VPS20YMR077C GAL2P13181 574 aa7.63□□□□□ -1.19
VPS20YMR077C VAN1P23642 535 aa7.62□□□□□ -1.19
VPS20YMR077C ROM1P53046 1155 aa7.61□□□□□ -1.19
VPS20YMR077C BUD9P53226 547 aa7.61□□□□□ -1.19
VPS20YMR077C GIS4Q04233 774 aa7.61□□□□□ -1.19
VPS20YMR077C RPC31P17890 251 aa7.6□□□□□ -1.19
VPS20YMR077C NAR1P23503 491 aaKnown RBP7.6□□□□□ -1.19
VPS20YMR077C NAB2P32505 525 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19 RIP-Chip
VPS20YMR077C CWH41P53008 833 aa7.6□□□□□ -1.19
VPS20YMR077C TRS33Q99394 268 aa7.58□□□□□ -1.2
VPS20YMR077C MAC1P35192 417 aa7.57□□□□□ -1.2
VPS20YMR077C YNR040WP53736 256 aa7.57□□□□□ -1.2
VPS20YMR077C AI3P03877 415 aa7.56□□□□□ -1.2
VPS20YMR077C LEO1P38439 464 aa7.56□□□□□ -1.2
VPS20YMR077C QDR2P40474 542 aa7.56□□□□□ -1.2
VPS20YMR077C SLP1Q12232 587 aa7.55□□□□□ -1.2
VPS20YMR077C SAC7P17121 654 aa7.53□□□□□ -1.2
VPS20YMR077C SFA1P32771 386 aa7.53□□□□□ -1.2
VPS20YMR077C TGL4P36165 910 aa7.53□□□□□ -1.2
VPS20YMR077C YER156CP40093 338 aaKnown RBP7.53□□□□□ -1.2
VPS20YMR077C RRM3P38766 723 aa7.52□□□□□ -1.21
VPS20YMR077C IDI1P15496 288 aa7.51□□□□□ -1.21
VPS20YMR077C ARI1P53111 347 aaKnown RBP7.51□□□□□ -1.21
VPS20YMR077C CAB1Q04430 367 aa7.51□□□□□ -1.21
VPS20YMR077C TTI1P36097 1038 aa7.5□□□□□ -1.21
VPS20YMR077C DYS1P38791 387 aa7.5□□□□□ -1.21
VPS20YMR077C ECM23Q02710 187 aa7.5□□□□□ -1.21
VPS20YMR077C YOR296WQ08748 1289 aa7.5□□□□□ -1.21
VPS20YMR077C MRPL33P20084 86 aa7.49□□□□□ -1.21
VPS20YMR077C PGM1P33401 570 aaKnown RBP7.49□□□□□ -1.21
VPS20YMR077C ITC1P53125 1264 aa7.49□□□□□ -1.21
VPS20YMR077C ALO1P54783 526 aaKnown RBP7.49□□□□□ -1.21
VPS20YMR077C VMA3P25515 160 aa7.48□□□□□ -1.21
VPS20YMR077C SUV3P32580 737 aa7.48□□□□□ -1.21
VPS20YMR077C OMA1P36163 345 aa7.48□□□□□ -1.21
VPS20YMR077C RSC2Q06488 889 aa7.47□□□□□ -1.21
VPS20YMR077C LDH1P38139 375 aa7.46□□□□□ -1.22
VPS20YMR077C GIP1P38229 639 aa7.46□□□□□ -1.22
VPS20YMR077C INP52P50942 1183 aa7.46□□□□□ -1.22
VPS20YMR077C GAS5Q08193 484 aa7.46□□□□□ -1.22
VPS20YMR077C MRP10O75012 95 aa7.45□□□□□ -1.22
VPS20YMR077C UBX7P38349 436 aa7.45□□□□□ -1.22
VPS20YMR077C FOX2Q02207 900 aaKnown RBP7.44□□□□□ -1.22
VPS20YMR077C RSC6P25632 483 aa7.43□□□□□ -1.22
VPS20YMR077C COQ2P32378 372 aa7.43□□□□□ -1.22
VPS20YMR077C ISW1P38144 1129 aa7.43□□□□□ -1.22
VPS20YMR077C YBR197CP38306 217 aa7.43□□□□□ -1.22
VPS20YMR077C TY4B-PA0A0B7P3V8 1104 aa7.42□□□□□ -1.22
VPS20YMR077C PUF6Q04373 656 aaKnown RBP7.42□□□□□ -1.22
VPS20YMR077C TY4A-HQ6Q5P6 413 aa7.42□□□□□ -1.22
VPS20YMR077C YBR287WP38355 427 aa7.41□□□□□ -1.22
VPS20YMR077C GIP2P40036 548 aa7.41□□□□□ -1.22
VPS20YMR077C GLT1Q12680 2145 aaKnown RBP7.4□□□□□ -1.22
VPS20YMR077C KAE1P36132 386 aa7.4□□□□□ -1.22
VPS20YMR077C BSD2P38356 321 aa7.4□□□□□ -1.22
VPS20YMR077C ALD4P46367 519 aaKnown RBP7.39□□□□□ -1.23
VPS20YMR077C DSE4P53753 1117 aa7.39□□□□□ -1.23
VPS20YMR077C MED7Q08278 222 aa7.39□□□□□ -1.23
VPS20YMR077C TED1P40533 473 aa7.38□□□□□ -1.23
VPS20YMR077C ISC10P32645 267 aa7.37□□□□□ -1.23
VPS20YMR077C YIL165CP40446 119 aa7.37□□□□□ -1.23
VPS20YMR077C SOK2P53438 785 aaPredicted RBP7.37□□□□□ -1.23
VPS20YMR077C IRC24P40580 263 aa7.36□□□□□ -1.23
VPS20YMR077C PPT1P53043 513 aa7.36□□□□□ -1.23
VPS20YMR077C PUN1Q06991 263 aa7.36□□□□□ -1.23
VPS20YMR077C YLR122CQ12312 125 aa7.36□□□□□ -1.23
VPS20YMR077C TY1A-NL1Q12391 440 aaKnown RBP7.36□□□□□ -1.23
VPS20YMR077C PUP1P25043 261 aa7.35□□□□□ -1.23
VPS20YMR077C CPS1P27614 576 aa7.35□□□□□ -1.23
VPS20YMR077C SAF1P38352 637 aa7.35□□□□□ -1.23
VPS20YMR077C LEM3P42838 414 aa7.35□□□□□ -1.23
VPS20YMR077C DMA2P53924 522 aa7.35□□□□□ -1.23
VPS20YMR077C SRS2P12954 1174 aa7.34□□□□□ -1.23
VPS20YMR077C MSN1P22148 382 aa7.34□□□□□ -1.23
VPS20YMR077C FIR1P40020 876 aa7.33□□□□□ -1.24
VPS20YMR077C YJL181WP46987 611 aa7.33□□□□□ -1.24
VPS20YMR077C GUP1P53154 560 aa7.33□□□□□ -1.24
VPS20YMR077C CHS2P14180 963 aa7.32□□□□□ -1.24
VPS20YMR077C YKR073CP36153 106 aa7.32□□□□□ -1.24
VPS20YMR077C INP51P40559 946 aaKnown RBP7.32□□□□□ -1.24
VPS20YMR077C TRP3P00937 484 aa7.31□□□□□ -1.24
VPS20YMR077C HXT8P40886 569 aa7.3□□□□□ -1.24
VPS20YMR077C TOS1P38288 455 aa7.29□□□□□ -1.24
VPS20YMR077C EMG1Q06287 252 aaKnown RBP7.29□□□□□ -1.24
VPS20YMR077C SOG2Q08817 791 aa7.29□□□□□ -1.24
VPS20YMR077C PUB1P32588 453 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
VPS20YMR077C LIP5P32875 414 aa7.28□□□□□ -1.24
VPS20YMR077C PAN5P38787 379 aa7.28□□□□□ -1.24
VPS20YMR077C AIM46P38885 310 aa7.28□□□□□ -1.24
VPS20YMR077C BIO5P53744 561 aaKnown RBP7.28□□□□□ -1.24
VPS20YMR077C REC8Q12188 680 aa7.28□□□□□ -1.24
VPS20YMR077C CWC15Q03772 175 aaKnown RBP7.27□□□□□ -1.25
VPS20YMR077C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms