RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W NTA1P40354 457 aa6.52□□□□□ -1.37
YML040WYML040W NNF1P47149 201 aa6.52□□□□□ -1.37
YML040WYML040W SAM37P50110 327 aa6.52□□□□□ -1.37
YML040WYML040W MSN5P52918 1224 aa6.52□□□□□ -1.37
YML040WYML040W MSN1P22148 382 aa6.51□□□□□ -1.37
YML040WYML040W NAP1P25293 417 aaKnown RBP6.51□□□□□ -1.37
YML040WYML040W QDR2P40474 542 aa6.51□□□□□ -1.37
YML040WYML040W JJJ2P46997 583 aa6.51□□□□□ -1.37
YML040WYML040W DYS1P38791 387 aa6.5□□□□□ -1.37
YML040WYML040W RAD55P38953 406 aa6.5□□□□□ -1.37
YML040WYML040W RPS26AP39938 119 aaKnown RBP6.5□□□□□ -1.37
YML040WYML040W RPS26BP39939 119 aaKnown RBP6.5□□□□□ -1.37
YML040WYML040W AAD14P42884 376 aa6.5□□□□□ -1.37
YML040WYML040W MSB3P48566 633 aaPredicted RBP6.5□□□□□ -1.37
YML040WYML040W YGR122WP53272 402 aa6.5□□□□□ -1.37
YML040WYML040W VPS16Q03308 798 aa6.5□□□□□ -1.37
YML040WYML040W RAS1P01119 309 aa6.5□□□□□ -1.37
YML040WYML040W HXK1P04806 485 aaKnown RBP6.5□□□□□ -1.37
YML040WYML040W CDC4P07834 779 aa6.5□□□□□ -1.37
YML040WYML040W CYC8P14922 966 aa6.5□□□□□ -1.37
YML040WYML040W SLA1P32790 1244 aa6.5□□□□□ -1.37
YML040WYML040W NOC3Q07896 663 aaPredicted RBP6.5□□□□□ -1.37
YML040WYML040W PIN2Q12057 282 aa6.5□□□□□ -1.37
YML040WYML040W TIF6Q12522 245 aaKnown RBP6.5□□□□□ -1.37
YML040WYML040W RPC31P17890 251 aa6.49□□□□□ -1.37
YML040WYML040W AFT1P22149 690 aa6.49□□□□□ -1.37
YML040WYML040W NAB2P32505 525 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
YML040WYML040W KAP122P32767 1081 aa6.49□□□□□ -1.37
YML040WYML040W IRS4P36115 615 aaKnown RBP6.49□□□□□ -1.37
YML040WYML040W CIC1P38779 376 aaKnown RBP6.49□□□□□ -1.37
YML040WYML040W ALA1P40825 983 aaKnown RBP6.49□□□□□ -1.37
YML040WYML040W ALD3P54114 506 aa6.49□□□□□ -1.37
YML040WYML040W BSC2Q05611 235 aa6.49□□□□□ -1.37
YML040WYML040W TY1A-DR3Q12441 440 aa6.49□□□□□ -1.37
YML040WYML040W ARG82P07250 355 aa6.48□□□□□ -1.37
YML040WYML040W PSY2P40164 858 aa6.48□□□□□ -1.37
YML040WYML040W ESF1Q06344 628 aaKnown RBP6.48□□□□□ -1.37
YML040WYML040W UGA3P26370 528 aa6.47□□□□□ -1.37
YML040WYML040W IRE1P32361 1115 aa6.47□□□□□ -1.37
YML040WYML040W ASH1P34233 588 aa6.47□□□□□ -1.37
YML040WYML040W FAA3P39002 694 aa6.47□□□□□ -1.37
YML040WYML040W AIR1P40507 360 aaKnown RBP6.47□□□□□ -1.37
YML040WYML040W ALD6P54115 500 aaKnown RBP6.47□□□□□ -1.37
YML040WYML040W FLP1P03870 423 aa6.46□□□□□ -1.38
YML040WYML040W LEU1P07264 779 aaKnown RBP6.46□□□□□ -1.38
YML040WYML040W RAD2P07276 1031 aa6.46□□□□□ -1.38
YML040WYML040W DAL1P32375 460 aa6.46□□□□□ -1.38
YML040WYML040W BSD2P38356 321 aa6.46□□□□□ -1.38
YML040WYML040W VTC4P47075 721 aa6.46□□□□□ -1.38
YML040WYML040W YOR296WQ08748 1289 aa6.46□□□□□ -1.38
YML040WYML040W OXR1Q08952 273 aa6.46□□□□□ -1.38
YML040WYML040W GIP1P38229 639 aa6.45□□□□□ -1.38
YML040WYML040W VAC8P39968 578 aa6.45□□□□□ -1.38
YML040WYML040W FIR1P40020 876 aa6.45□□□□□ -1.38
YML040WYML040W CTR9P89105 1077 aa6.45□□□□□ -1.38
YML040WYML040W PSH1Q12161 406 aa6.45□□□□□ -1.38
YML040WYML040W DPS1P04802 557 aaKnown RBP6.44□□□□□ -1.38
YML040WYML040W PDC6P26263 563 aaKnown RBP6.44□□□□□ -1.38
YML040WYML040W PEP7P32609 515 aa6.44□□□□□ -1.38
YML040WYML040W MNR2P35724 969 aa6.44□□□□□ -1.38
YML040WYML040W ISW1P38144 1129 aa6.44□□□□□ -1.38
YML040WYML040W YTA6P40328 754 aa6.44□□□□□ -1.38
YML040WYML040W MAD1P40957 749 aa6.44□□□□□ -1.38
YML040WYML040W PTK2P47116 818 aaKnown RBP6.44□□□□□ -1.38
YML040WYML040W YCS4Q06156 1176 aa6.44□□□□□ -1.38
YML040WYML040W FPR4Q06205 392 aaPredicted RBP6.44□□□□□ -1.38
YML040WYML040W INP54Q08227 384 aaKnown RBP6.44□□□□□ -1.38
YML040WYML040W COBP00163 385 aa6.43□□□□□ -1.38
YML040WYML040W CLN2P20438 545 aa6.43□□□□□ -1.38
YML040WYML040W RGA1P39083 1007 aa6.43□□□□□ -1.38
YML040WYML040W SKP1P52286 194 aa6.43□□□□□ -1.38
YML040WYML040W YOL098CQ12496 1037 aa6.43□□□□□ -1.38
YML040WYML040W PRP40P33203 583 aaKnown RBP6.42□□□□□ -1.38
YML040WYML040W AHP1P38013 176 aaKnown RBP6.42□□□□□ -1.38
YML040WYML040W MTO1P53070 669 aa6.42□□□□□ -1.38
YML040WYML040W HST3P53687 447 aa6.42□□□□□ -1.38
YML040WYML040W YPL109CQ02981 657 aa6.42□□□□□ -1.38
YML040WYML040W DAL4Q04895 635 aa6.42□□□□□ -1.38
YML040WYML040W EMG1Q06287 252 aaKnown RBP6.42□□□□□ -1.38
YML040WYML040W DLD1P32891 587 aa6.41□□□□□ -1.38
YML040WYML040W DUR3P33413 735 aa6.41□□□□□ -1.38
YML040WYML040W YJR098CP47139 656 aa6.41□□□□□ -1.38
YML040WYML040W MSH6Q03834 1242 aa6.41□□□□□ -1.38
YML040WYML040W SSF2Q12153 453 aaPredicted RBP6.41□□□□□ -1.38
YML040WYML040W PRE9P23638 258 aaKnown RBP6.4□□□□□ -1.39
YML040WYML040W PET112P33893 541 aa6.4□□□□□ -1.39
YML040WYML040W YHL008CP38750 627 aa6.4□□□□□ -1.39
YML040WYML040W AIM46P38885 310 aa6.4□□□□□ -1.39
YML040WYML040W NUP85P46673 744 aa6.4□□□□□ -1.39
YML040WYML040W YJR115WP47152 169 aa6.4□□□□□ -1.39
YML040WYML040W CUS1Q02554 436 aaPredicted RBP6.4□□□□□ -1.39
YML040WYML040W MCM5P29496 775 aaKnown RBP6.39□□□□□ -1.39
YML040WYML040W YBR287WP38355 427 aa6.39□□□□□ -1.39
YML040WYML040W MRPS18P42847 217 aa6.39□□□□□ -1.39
YML040WYML040W IOC3P43596 787 aa6.39□□□□□ -1.39
YML040WYML040W ITC1P53125 1264 aa6.39□□□□□ -1.39
YML040WYML040W MCD1Q12158 566 aa6.39□□□□□ -1.39
YML040WYML040W RGP1P16664 663 aa6.38□□□□□ -1.39
YML040WYML040W UGA4P32837 571 aa6.38□□□□□ -1.39
YML040WYML040W DUT1P33317 147 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms