RNA–Protein interactions for RNA: YLR424W

SPP382, Transcript of Essential protein that forms a dimer with Ntr2p, yeast

Gene SPP382, Length 2,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP382	YLR424W	LEU1	P07264	779 aa	Known RBP	4.2	□□□□□ -1.74
SPP382	YLR424W	PUP1	P25043	261 aa		4.2	□□□□□ -1.74
SPP382	YLR424W	MLF3	P32047	452 aa		4.2	□□□□□ -1.74
SPP382	YLR424W	MRPL16	P38064	232 aa		4.2	□□□□□ -1.74
SPP382	YLR424W	YRB30	P53107	440 aa	Predicted RBP	4.2	□□□□□ -1.74
SPP382	YLR424W	UTP4	Q06679	776 aa	Known RBP	4.2	□□□□□ -1.74
SPP382	YLR424W	MCA1	Q08601	432 aa		4.2	□□□□□ -1.74
SPP382	YLR424W	SCD5	P34758	872 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	UBX7	P38349	436 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	CWH41	P53008	833 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	TRS33	Q99394	268 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	FPS1	P23900	669 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	BOI2	P39969	1040 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	STB3	Q12427	513 aa		4.19	□□□□□ -1.74
SPP382	YLR424W	SPR3	P41901	512 aa		4.18	□□□□□ -1.74
SPP382	YLR424W	ALD2	P47771	506 aa		4.18	□□□□□ -1.74
SPP382	YLR424W	HXT5	P38695	592 aa		4.18	□□□□□ -1.74
SPP382	YLR424W	RGP1	P16664	663 aa		4.17	□□□□□ -1.74
SPP382	YLR424W	LSB6	P42951	607 aa		4.17	□□□□□ -1.74
SPP382	YLR424W	PUF6	Q04373	656 aa	Known RBP	4.17	□□□□□ -1.74
SPP382	YLR424W	PAM1	P37304	830 aa	Known RBP	4.16	□□□□□ -1.74
SPP382	YLR424W	MET10	P39692	1035 aa		4.16	□□□□□ -1.74
SPP382	YLR424W	MTO1	P53070	669 aa		4.16	□□□□□ -1.74
SPP382	YLR424W	DOS2	P54858	310 aa		4.16	□□□□□ -1.74
SPP382	YLR424W	PDC5	P16467	563 aa	Known RBP	4.15	□□□□□ -1.75
SPP382	YLR424W	KNS1	P32350	737 aa	Predicted RBP	4.15	□□□□□ -1.75
SPP382	YLR424W	SUV3	P32580	737 aa		4.15	□□□□□ -1.75
SPP382	YLR424W	KAP122	P32767	1081 aa		4.15	□□□□□ -1.75
SPP382	YLR424W	NOB1	Q08444	459 aa	Known RBP	4.15	□□□□□ -1.75
SPP382	YLR424W	HEM3	P28789	327 aa		4.14	□□□□□ -1.75
SPP382	YLR424W	CAB1	Q04430	367 aa		4.14	□□□□□ -1.75
SPP382	YLR424W	YTA7	P40340	1379 aa		4.14	□□□□□ -1.75
SPP382	YLR424W	SKP1	P52286	194 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	YML083C	Q04526	418 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	PUN1	Q06991	263 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	MET1	P36150	593 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	TAT1	P38085	619 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	ALD4	P46367	519 aa	Known RBP	4.13	□□□□□ -1.75
SPP382	YLR424W	HEH2	Q03281	663 aa		4.13	□□□□□ -1.75
SPP382	YLR424W	TY1A-DR2	Q03964	440 aa	Known RBP	4.13	□□□□□ -1.75
SPP382	YLR424W	SRS2	P12954	1174 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	MAC1	P35192	417 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	BRN1	P38170	754 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	FOX2	Q02207	900 aa	Known RBP	4.12	□□□□□ -1.75
SPP382	YLR424W	RPC31	P17890	251 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	MRPL33	P20084	86 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	NCL1	P38205	684 aa	Known RBP	4.12	□□□□□ -1.75
SPP382	YLR424W	YBR197C	P38306	217 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	MSC7	P38694	644 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	QDR2	P40474	542 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	PRY1	P47032	299 aa		4.12	□□□□□ -1.75
SPP382	YLR424W	CUS1	Q02554	436 aa	Predicted RBP	4.12	□□□□□ -1.75
SPP382	YLR424W	CWC15	Q03772	175 aa	Known RBP	4.12	□□□□□ -1.75
SPP382	YLR424W	CDC3	P32457	520 aa	Known RBP	4.11	□□□□□ -1.75
SPP382	YLR424W	RRN6	P32786	894 aa		4.11	□□□□□ -1.75
SPP382	YLR424W	APM2	P38700	605 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	VMA3	P25515	160 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	DYS1	P38791	387 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	IRC24	P40580	263 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	INP52	P50942	1183 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	RPL34A	P87262	121 aa	Predicted RBP	4.1	□□□□□ -1.75
SPP382	YLR424W	YPL034W	Q03083	165 aa		4.1	□□□□□ -1.75
SPP382	YLR424W	ISC10	P32645	267 aa		4.09	□□□□□ -1.75
SPP382	YLR424W	SSF1	P38789	453 aa	Predicted RBP	4.09	□□□□□ -1.75
SPP382	YLR424W	FAR11	P53917	953 aa		4.09	□□□□□ -1.75
SPP382	YLR424W	SEN54	Q02825	467 aa	Predicted RBP	4.09	□□□□□ -1.75
SPP382	YLR424W	ASF1	P32447	279 aa		4.09	□□□□□ -1.76
SPP382	YLR424W	SPC42	P36094	363 aa		4.09	□□□□□ -1.76
SPP382	YLR424W	LDH1	P38139	375 aa		4.09	□□□□□ -1.76
SPP382	YLR424W	OCA5	P38738	679 aa		4.09	□□□□□ -1.76
SPP382	YLR424W	PNP1	Q05788	311 aa		4.09	□□□□□ -1.76
SPP382	YLR424W	ALO1	P54783	526 aa	Known RBP	4.08	□□□□□ -1.76
SPP382	YLR424W	FPR4	Q06205	392 aa	Predicted RBP	4.08	□□□□□ -1.76
SPP382	YLR424W	YOR296W	Q08748	1289 aa		4.08	□□□□□ -1.76
SPP382	YLR424W	NUG1	P40010	520 aa	Known RBP	4.07	□□□□□ -1.76
SPP382	YLR424W	GIP1	P38229	639 aa		4.07	□□□□□ -1.76
SPP382	YLR424W	PRK1	P40494	810 aa		4.07	□□□□□ -1.76
SPP382	YLR424W	YNR040W	P53736	256 aa		4.07	□□□□□ -1.76
SPP382	YLR424W	SUB1	P54000	292 aa	Known RBP	4.06	□□□□□ -1.76
SPP382	YLR424W	ISW1	P38144	1129 aa		4.06	□□□□□ -1.76
SPP382	YLR424W	ITC1	P53125	1264 aa		4.06	□□□□□ -1.76
SPP382	YLR424W	YBR287W	P38355	427 aa		4.05	□□□□□ -1.76
SPP382	YLR424W	TPS3	P38426	1054 aa	Known RBP	4.05	□□□□□ -1.76
SPP382	YLR424W	YER156C	P40093	338 aa	Known RBP	4.05	□□□□□ -1.76
SPP382	YLR424W	FUR4	P05316	633 aa	Known RBP	4.04	□□□□□ -1.76
SPP382	YLR424W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SPP382	YLR424W	OMA1	P36163	345 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	BSD2	P38356	321 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	NMD2	P38798	1089 aa	Known RBP	4.04	□□□□□ -1.76
SPP382	YLR424W	FIR1	P40020	876 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	ATG36	P46983	293 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	YAF9	P53930	226 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	HXT8	P40886	569 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	LSO1	Q3E827	93 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	NHA1	Q99271	985 aa		4.04	□□□□□ -1.76
SPP382	YLR424W	IDI1	P15496	288 aa		4.03	□□□□□ -1.76
SPP382	YLR424W	MSN1	P22148	382 aa		4.03	□□□□□ -1.76
SPP382	YLR424W	SWE1	P32944	819 aa		4.03	□□□□□ -1.76
SPP382	YLR424W	ALG14	P38242	237 aa		4.03	□□□□□ -1.76
SPP382	YLR424W	RTS3	P53289	263 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms