RNA–Protein interactions for RNA: YLR337C

VRP1, Transcript of Verprolin, proline-rich actin-associated protein, yeast

Gene VRP1, Length 2,454 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VRP1	YLR337C	PUF6	Q04373	656 aa	Known RBP	7.79	□□□□□ -1.16
VRP1	YLR337C	SUV3	P32580	737 aa		7.78	□□□□□ -1.16
VRP1	YLR337C	FKH1	P40466	484 aa		7.78	□□□□□ -1.16
VRP1	YLR337C	KAR5	Q04746	504 aa		7.78	□□□□□ -1.16
VRP1	YLR337C	IXR1	P33417	597 aa		7.78	□□□□□ -1.16
VRP1	YLR337C	KIP3	P53086	805 aa	Known RBP	7.77	□□□□□ -1.17
VRP1	YLR337C	CAB1	Q04430	367 aa		7.77	□□□□□ -1.17
VRP1	YLR337C	PNP1	Q05788	311 aa		7.77	□□□□□ -1.17
VRP1	YLR337C	TSC13	Q99190	310 aa		7.77	□□□□□ -1.17
VRP1	YLR337C	TY1B-NL2	Q99337	1749 aa	Known RBP	7.77	□□□□□ -1.17
VRP1	YLR337C	TPD3	P31383	635 aa		7.77	□□□□□ -1.17
VRP1	YLR337C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.77	□□□□□ -1.17	not detected
VRP1	YLR337C	KRE5	P22023	1365 aa		7.77	□□□□□ -1.17
VRP1	YLR337C	CFT1	Q06632	1357 aa	Known RBP	7.77	□□□□□ -1.17
VRP1	YLR337C	YLR419W	Q06698	1435 aa	Known RBP	7.77	□□□□□ -1.17
VRP1	YLR337C	PRT1	P06103	763 aa	Known RBP	7.76	□□□□□ -1.17
VRP1	YLR337C	PDI1	P17967	522 aa	Known RBP	7.76	□□□□□ -1.17
VRP1	YLR337C	UBP9	P39967	754 aa		7.76	□□□□□ -1.17
VRP1	YLR337C	RRD1	P40454	393 aa	Known RBP	7.76	□□□□□ -1.17
VRP1	YLR337C	FRT1	Q99332	602 aa		7.76	□□□□□ -1.17
VRP1	YLR337C	HAP4	P14064	554 aa		7.75	□□□□□ -1.17
VRP1	YLR337C	TAF8	Q03750	510 aa		7.75	□□□□□ -1.17
VRP1	YLR337C	MHP1	P43638	1398 aa		7.75	□□□□□ -1.17
VRP1	YLR337C	SPE2	P21182	396 aa		7.74	□□□□□ -1.17
VRP1	YLR337C	RIA1	P53893	1110 aa		7.74	□□□□□ -1.17
VRP1	YLR337C	GRS1	P38088	690 aa	Known RBP	7.74	□□□□□ -1.17
VRP1	YLR337C	STB3	Q12427	513 aa		7.73	□□□□□ -1.17
VRP1	YLR337C	ATG1	P53104	897 aa		7.73	□□□□□ -1.17
VRP1	YLR337C	ELP4	Q02884	456 aa	Known RBP	7.73	□□□□□ -1.17
VRP1	YLR337C	TFG1	P41895	735 aa	Predicted RBP	7.72	□□□□□ -1.17
VRP1	YLR337C	ISR1	Q06098	443 aa	Known RBP	7.72	□□□□□ -1.17
VRP1	YLR337C	GAS4	Q08271	471 aa		7.72	□□□□□ -1.17
VRP1	YLR337C	YML082W	Q04533	649 aa	Known RBP	7.72	□□□□□ -1.17
VRP1	YLR337C	AIR2	Q12476	344 aa	Known RBP	7.72	□□□□□ -1.17
VRP1	YLR337C	PPX1	P38698	397 aa		7.71	□□□□□ -1.17
VRP1	YLR337C	SEC3	P33332	1336 aa	Known RBP	7.71	□□□□□ -1.18
VRP1	YLR337C	SEC20	P28791	383 aa		7.71	□□□□□ -1.18
VRP1	YLR337C	BOI1	P38041	980 aa	Known RBP	7.71	□□□□□ -1.18
VRP1	YLR337C	HDA3	Q06623	655 aa		7.71	□□□□□ -1.18
VRP1	YLR337C	USO1	P25386	1790 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	SRS2	P12954	1174 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	KXD1	P53158	218 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	NUT2	Q06213	157 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	MIP1	P15801	1254 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	PUN1	Q06991	263 aa		7.7	□□□□□ -1.18
VRP1	YLR337C	MET4	P32389	672 aa		7.69	□□□□□ -1.18
VRP1	YLR337C	SPT23	P35210	1082 aa		7.69	□□□□□ -1.18
VRP1	YLR337C	AIM9	P40053	627 aa	Known RBP	7.69	□□□□□ -1.18
VRP1	YLR337C	PTC2	P39966	464 aa	Known RBP	7.69	□□□□□ -1.18
VRP1	YLR337C	ATG3	P40344	310 aa		7.69	□□□□□ -1.18
VRP1	YLR337C	QDR1	P40475	563 aa		7.69	□□□□□ -1.18
VRP1	YLR337C	YNR029C	P53729	429 aa	Known RBP	7.69	□□□□□ -1.18
VRP1	YLR337C	KTR2	P33550	425 aa		7.68	□□□□□ -1.18
VRP1	YLR337C	POL32	P47110	350 aa		7.68	□□□□□ -1.18
VRP1	YLR337C	GPI13	Q07830	1017 aa		7.68	□□□□□ -1.18
VRP1	YLR337C	SDH2	P21801	266 aa		7.67	□□□□□ -1.18
VRP1	YLR337C	UBP1	P25037	809 aa		7.67	□□□□□ -1.18
VRP1	YLR337C	CHZ1	P40019	153 aa	Predicted RBP	7.66	□□□□□ -1.18
VRP1	YLR337C	GLO3	P38682	493 aa	Known RBP	7.65	□□□□□ -1.18
VRP1	YLR337C	NOP2	P40991	618 aa	Known RBP	7.65	□□□□□ -1.18
VRP1	YLR337C	PDS5	Q04264	1277 aa		7.65	□□□□□ -1.18
VRP1	YLR337C	ATG20	Q07528	640 aa		7.65	□□□□□ -1.18
VRP1	YLR337C	LSO1	Q3E827	93 aa		7.65	□□□□□ -1.18
VRP1	YLR337C	ACF4	P47129	309 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	FUR4	P05316	633 aa	Known RBP	7.64	□□□□□ -1.19
VRP1	YLR337C	NTH2	P35172	780 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	THI12	P42883	340 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	THI5	P43534	340 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	THI11	P47183	340 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	THI13	Q07748	340 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	PSK1	P31374	1356 aa		7.64	□□□□□ -1.19
VRP1	YLR337C	RCM1	P53972	490 aa		7.63	□□□□□ -1.19
VRP1	YLR337C	ASF1	P32447	279 aa		7.63	□□□□□ -1.19
VRP1	YLR337C	SEC8	P32855	1065 aa		7.63	□□□□□ -1.19
VRP1	YLR337C	MNL2	Q12205	849 aa		7.63	□□□□□ -1.19
VRP1	YLR337C	VAN1	P23642	535 aa		7.62	□□□□□ -1.19
VRP1	YLR337C	NGR1	P32831	672 aa	Known RBP	7.62	□□□□□ -1.19
VRP1	YLR337C	EMW1	P42842	904 aa	Known RBP	7.62	□□□□□ -1.19
VRP1	YLR337C	YJR107W	P47145	328 aa		7.62	□□□□□ -1.19
VRP1	YLR337C	APP1	P53933	587 aa		7.62	□□□□□ -1.19
VRP1	YLR337C	SPT7	P35177	1332 aa		7.61	□□□□□ -1.19
VRP1	YLR337C	SWI5	P08153	709 aa		7.61	□□□□□ -1.19
VRP1	YLR337C	SPT16	P32558	1035 aa	Known RBP	7.61	□□□□□ -1.19
VRP1	YLR337C	PRE3	P38624	215 aa		7.61	□□□□□ -1.19
VRP1	YLR337C	YBR197C	P38306	217 aa		7.6	□□□□□ -1.19
VRP1	YLR337C	PPH3	P32345	308 aa		7.6	□□□□□ -1.19
VRP1	YLR337C	OCA5	P38738	679 aa		7.6	□□□□□ -1.19
VRP1	YLR337C	APC11	Q12157	165 aa		7.6	□□□□□ -1.19
VRP1	YLR337C	RPS6A	P0CX37	236 aa	Known RBP	7.59	□□□□□ -1.19
VRP1	YLR337C	RPS6B	P0CX38	236 aa	Predicted RBP	7.59	□□□□□ -1.19
VRP1	YLR337C	BUD31	P25337	157 aa	Predicted RBP	7.59	□□□□□ -1.19
VRP1	YLR337C	PUS5	Q06244	254 aa		7.59	□□□□□ -1.19
VRP1	YLR337C	MAG2	Q06436	670 aa	Known RBP	7.59	□□□□□ -1.19
VRP1	YLR337C	OYE2	Q03558	400 aa	Known RBP	7.59	□□□□□ -1.19
VRP1	YLR337C	PAT1	P25644	796 aa	Known RBP	7.58	□□□□□ -1.2
VRP1	YLR337C	TRS33	Q99394	268 aa		7.58	□□□□□ -1.2
VRP1	YLR337C	RPB10	P22139	70 aa		7.58	□□□□□ -1.2
VRP1	YLR337C	FYV10	P40492	516 aa		7.57	□□□□□ -1.2
VRP1	YLR337C	ISU1	Q03020	165 aa		7.57	□□□□□ -1.2
VRP1	YLR337C	YML133C	Q03099	1374 aa		7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms