RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W GEF1P37020 779 aa6.74□□□□□ -1.33
SMD2YLR275W DYS1P38791 387 aa6.74□□□□□ -1.33
SMD2YLR275W LDH1P38139 375 aa6.73□□□□□ -1.33
SMD2YLR275W FUR4P05316 633 aaKnown RBP6.72□□□□□ -1.33
SMD2YLR275W NCL1P38205 684 aaKnown RBP6.72□□□□□ -1.33
SMD2YLR275W MSC7P38694 644 aa6.72□□□□□ -1.33
SMD2YLR275W TY1A-DR2Q03964 440 aaKnown RBP6.72□□□□□ -1.33
SMD2YLR275W APM2P38700 605 aa6.71□□□□□ -1.34
SMD2YLR275W HEH2Q03281 663 aa6.71□□□□□ -1.34
SMD2YLR275W GPM1P00950 247 aaKnown RBP6.7□□□□□ -1.34
SMD2YLR275W BOL3P39724 118 aa6.7□□□□□ -1.34
SMD2YLR275W YOR296WQ08748 1289 aa6.7□□□□□ -1.34
SMD2YLR275W BOI1P38041 980 aaKnown RBP6.69□□□□□ -1.34
SMD2YLR275W KAR5Q04746 504 aa6.69□□□□□ -1.34
SMD2YLR275W RGA2Q06407 1009 aa6.69□□□□□ -1.34
SMD2YLR275W LSO1Q3E827 93 aa6.69□□□□□ -1.34
SMD2YLR275W AI1P03875 834 aa6.68□□□□□ -1.34
SMD2YLR275W CDC3P32457 520 aaKnown RBP6.68□□□□□ -1.34
SMD2YLR275W GIP1P38229 639 aa6.68□□□□□ -1.34
SMD2YLR275W BSD2P38356 321 aa6.68□□□□□ -1.34
SMD2YLR275W YNR040WP53736 256 aa6.68□□□□□ -1.34
SMD2YLR275W APC11Q12157 165 aa6.68□□□□□ -1.34
SMD2YLR275W PDC5P16467 563 aaKnown RBP6.67□□□□□ -1.34
SMD2YLR275W KNS1P32350 737 aaPredicted RBP6.67□□□□□ -1.34
SMD2YLR275W NAB2P32505 525 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SMD2YLR275W ISW1P38144 1129 aa6.67□□□□□ -1.34
SMD2YLR275W HXT8P40886 569 aa6.67□□□□□ -1.34
SMD2YLR275W MSN1P22148 382 aa6.66□□□□□ -1.34
SMD2YLR275W SUT1P53032 299 aaKnown RBP6.66□□□□□ -1.34
SMD2YLR275W ITC1P53125 1264 aa6.66□□□□□ -1.34
SMD2YLR275W RPB10P22139 70 aa6.65□□□□□ -1.34
SMD2YLR275W FIR1P40020 876 aa6.65□□□□□ -1.34
SMD2YLR275W KTR2P33550 425 aa6.64□□□□□ -1.35
SMD2YLR275W PRK1P40494 810 aa6.64□□□□□ -1.35
SMD2YLR275W THI72Q08579 599 aa6.64□□□□□ -1.35
SMD2YLR275W YBR287WP38355 427 aa6.63□□□□□ -1.35
SMD2YLR275W GLO3P38682 493 aaKnown RBP6.63□□□□□ -1.35
SMD2YLR275W NSG2P53898 299 aa6.63□□□□□ -1.35
SMD2YLR275W IDI1P15496 288 aa6.62□□□□□ -1.35
SMD2YLR275W MDJ1P35191 511 aa6.62□□□□□ -1.35
SMD2YLR275W YER156CP40093 338 aaKnown RBP6.62□□□□□ -1.35
SMD2YLR275W YFL066CP43538 392 aa6.62□□□□□ -1.35
SMD2YLR275W ATG1P53104 897 aa6.62□□□□□ -1.35
SMD2YLR275W QDR1P40475 563 aa6.61□□□□□ -1.35
SMD2YLR275W SBE2P42223 864 aaKnown RBP6.61□□□□□ -1.35
SMD2YLR275W PHM7Q12252 991 aa6.61□□□□□ -1.35
SMD2YLR275W SMC1P32908 1225 aa6.6□□□□□ -1.35
SMD2YLR275W MET1P36150 593 aa6.6□□□□□ -1.35
SMD2YLR275W ICP55P40051 511 aa6.6□□□□□ -1.35
SMD2YLR275W NTA1P40354 457 aa6.6□□□□□ -1.35
SMD2YLR275W YIL165CP40446 119 aa6.6□□□□□ -1.35
SMD2YLR275W RGD2P43556 714 aa6.6□□□□□ -1.35
SMD2YLR275W YNR014WP53719 212 aa6.6□□□□□ -1.35
SMD2YLR275W RAD55P38953 406 aa6.59□□□□□ -1.35
SMD2YLR275W HAT1Q12341 374 aa6.59□□□□□ -1.35
SMD2YLR275W BOI2P39969 1040 aa6.58□□□□□ -1.36
SMD2YLR275W ACF4P47129 309 aa6.58□□□□□ -1.36
SMD2YLR275W EMG1Q06287 252 aaKnown RBP6.58□□□□□ -1.36
SMD2YLR275W RSC2Q06488 889 aa6.58□□□□□ -1.36
SMD2YLR275W TRL1P09880 827 aaKnown RBP6.57□□□□□ -1.36
SMD2YLR275W AIM46P38885 310 aa6.57□□□□□ -1.36
SMD2YLR275W TDA6Q06466 467 aa6.57□□□□□ -1.36
SMD2YLR275W PUS1Q12211 544 aaKnown RBP6.57□□□□□ -1.36
SMD2YLR275W YBL113CQ7M4S9 792 aa6.57□□□□□ -1.36
SMD2YLR275W MRP10O75012 95 aa6.56□□□□□ -1.36
SMD2YLR275W PGM2P37012 569 aaKnown RBP6.56□□□□□ -1.36
SMD2YLR275W ALG14P38242 237 aa6.56□□□□□ -1.36
SMD2YLR275W ERP5P38819 212 aa6.56□□□□□ -1.36
SMD2YLR275W PPT1P53043 513 aa6.56□□□□□ -1.36
SMD2YLR275W UFD2P54860 961 aa6.56□□□□□ -1.36
SMD2YLR275W TIF6Q12522 245 aaKnown RBP6.56□□□□□ -1.36
SMD2YLR275W IRS4P36115 615 aaKnown RBP6.55□□□□□ -1.36
SMD2YLR275W GRS1P38088 690 aaKnown RBP6.55□□□□□ -1.36
SMD2YLR275W PSY2P40164 858 aa6.55□□□□□ -1.36
SMD2YLR275W NHA1Q99271 985 aa6.55□□□□□ -1.36
SMD2YLR275W NAR1P23503 491 aaKnown RBP6.54□□□□□ -1.36
SMD2YLR275W GIS4Q04233 774 aa6.54□□□□□ -1.36
SMD2YLR275W MCX1P38323 520 aaPredicted RBP6.53□□□□□ -1.36
SMD2YLR275W YJL181WP46987 611 aa6.53□□□□□ -1.36
SMD2YLR275W YPR053CQ6Q5F3 151 aa6.53□□□□□ -1.36
SMD2YLR275W MDJ2P42834 146 aa6.52□□□□□ -1.37
SMD2YLR275W TRS120Q04183 1289 aa6.52□□□□□ -1.37
SMD2YLR275W SSF1P38789 453 aaPredicted RBP6.51□□□□□ -1.37
SMD2YLR275W YMR187CQ03236 431 aa6.51□□□□□ -1.37
SMD2YLR275W INP51P40559 946 aaKnown RBP6.5□□□□□ -1.37
SMD2YLR275W MTC5Q03897 1148 aa6.5□□□□□ -1.37
SMD2YLR275W SLP1Q12232 587 aa6.5□□□□□ -1.37
SMD2YLR275W FUS1P11710 512 aa6.49□□□□□ -1.37
SMD2YLR275W RSC4Q02206 625 aa6.49□□□□□ -1.37
SMD2YLR275W ALD3P54114 506 aa6.48□□□□□ -1.37
SMD2YLR275W NUT2Q06213 157 aa6.48□□□□□ -1.37
SMD2YLR275W FRT1Q99332 602 aa6.48□□□□□ -1.37
SMD2YLR275W SKN7P38889 622 aa6.47□□□□□ -1.37
SMD2YLR275W SOK2P53438 785 aaPredicted RBP6.47□□□□□ -1.37
SMD2YLR275W BIO5P53744 561 aaKnown RBP6.47□□□□□ -1.37
SMD2YLR275W YNL011CP53980 444 aa6.47□□□□□ -1.37
SMD2YLR275W MNL2Q12205 849 aa6.47□□□□□ -1.37
SMD2YLR275W YDR215CQ12240 137 aa6.47□□□□□ -1.37
SMD2YLR275W YCK2P23292 546 aaKnown RBP6.46□□□□□ -1.38
SMD2YLR275W PYC2P32327 1180 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms