RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C TRM732Q03496 1420 aa4.05□□□□□ -1.76
PEX1YKL197C HSC82P15108 705 aaKnown RBP4.05□□□□□ -1.76
PEX1YKL197C MSH4P40965 878 aaPredicted RBP4.05□□□□□ -1.76
PEX1YKL197C HPC2Q01448 625 aa4.05□□□□□ -1.76
PEX1YKL197C CDC45Q08032 650 aa4.05□□□□□ -1.76
PEX1YKL197C DPS1P04802 557 aaKnown RBP4.05□□□□□ -1.76
PEX1YKL197C PAM1P37304 830 aaKnown RBP4.05□□□□□ -1.76
PEX1YKL197C PMC1P38929 1173 aaPredicted RBP4.05□□□□□ -1.76
PEX1YKL197C GDB1Q06625 1536 aa4.05□□□□□ -1.76
PEX1YKL197C HXT5P38695 592 aa4.04□□□□□ -1.76
PEX1YKL197C RAD59Q12223 238 aa4.04□□□□□ -1.76
PEX1YKL197C PUS6P53294 404 aa4.04□□□□□ -1.76
PEX1YKL197C UBX5Q06682 500 aa4.04□□□□□ -1.76
PEX1YKL197C IMH1Q06704 911 aaKnown RBP4.04□□□□□ -1.76
PEX1YKL197C DOP1Q03921 1698 aa4.04□□□□□ -1.76
PEX1YKL197C MRX12P47084 519 aa4.04□□□□□ -1.76
PEX1YKL197C YPR097WQ06839 1073 aa4.04□□□□□ -1.76
PEX1YKL197C YDL206WQ12424 762 aa4.04□□□□□ -1.76
PEX1YKL197C VPS15P22219 1454 aa4.03□□□□□ -1.76
PEX1YKL197C LTV1P34078 463 aa4.03□□□□□ -1.76
PEX1YKL197C PES4P39684 611 aa4.03□□□□□ -1.76
PEX1YKL197C AIR1P40507 360 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C HXT10P43581 546 aa4.03□□□□□ -1.76
PEX1YKL197C TFB3Q03290 321 aa4.03□□□□□ -1.76
PEX1YKL197C YPR084WQ06821 456 aa4.03□□□□□ -1.76
PEX1YKL197C GEA2P39993 1459 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C POL5P39985 1022 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C RAD26P40352 1085 aa4.03□□□□□ -1.76
PEX1YKL197C RRD1P40454 393 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C SEC27P41811 889 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C RPA14P50106 137 aa4.03□□□□□ -1.76
PEX1YKL197C PAP2P53632 584 aaKnown RBP4.03□□□□□ -1.76
PEX1YKL197C PKH3Q03306 898 aaPredicted RBP4.02□□□□□ -1.77
PEX1YKL197C HEL2Q05580 639 aaKnown RBP4.02□□□□□ -1.77
PEX1YKL197C JIP5Q06214 492 aaPredicted RBP4.02□□□□□ -1.77
PEX1YKL197C YBT1P32386 1661 aa4.02□□□□□ -1.77
PEX1YKL197C OPY1P38271 328 aa4.02□□□□□ -1.77
PEX1YKL197C OCA5P38738 679 aa4.02□□□□□ -1.77
PEX1YKL197C CBF5P33322 483 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
PEX1YKL197C TPS3P38426 1054 aaKnown RBP4.01□□□□□ -1.77
PEX1YKL197C YNL058CP53947 316 aa4.01□□□□□ -1.77
PEX1YKL197C BUD3P25558 1636 aa4.01□□□□□ -1.77
PEX1YKL197C CMP2P14747 604 aa4.01□□□□□ -1.77
PEX1YKL197C SLX8P40072 274 aa4.01□□□□□ -1.77
PEX1YKL197C PRP3Q03338 469 aaPredicted RBP4.01□□□□□ -1.77
PEX1YKL197C CHC1P22137 1653 aaKnown RBP4.01□□□□□ -1.77
PEX1YKL197C MRF1P30775 413 aaPredicted RBP4.01□□□□□ -1.77
PEX1YKL197C RPC82P32349 654 aa4□□□□□ -1.77
PEX1YKL197C ALD3P54114 506 aa4□□□□□ -1.77
PEX1YKL197C SYH1Q02875 849 aaKnown RBP4□□□□□ -1.77
PEX1YKL197C NUP170P38181 1502 aa4□□□□□ -1.77
PEX1YKL197C PHO87P25360 923 aa4□□□□□ -1.77
PEX1YKL197C LAM1P38851 1228 aa4□□□□□ -1.77
PEX1YKL197C BOI2P39969 1040 aa4□□□□□ -1.77
PEX1YKL197C VID30P53076 958 aa4□□□□□ -1.77
PEX1YKL197C NFI1Q12216 726 aa4□□□□□ -1.77
PEX1YKL197C SNU66Q12420 587 aaPredicted RBP4□□□□□ -1.77
PEX1YKL197C NOP56Q12460 504 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PEX1YKL197C TRM3Q07527 1436 aa4□□□□□ -1.77
PEX1YKL197C NOP7P53261 605 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C CTR9P89105 1077 aa3.99□□□□□ -1.77
PEX1YKL197C SVL3Q03088 825 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C PUS5Q06244 254 aa3.99□□□□□ -1.77
PEX1YKL197C PDR10P51533 1564 aa3.99□□□□□ -1.77
PEX1YKL197C PET111P08468 800 aa3.99□□□□□ -1.77
PEX1YKL197C MAK16P10962 306 aaPredicted RBP3.99□□□□□ -1.77
PEX1YKL197C VMA4P22203 233 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C OCA1P50946 238 aaPredicted RBP3.99□□□□□ -1.77
PEX1YKL197C TAN1P53072 289 aaPredicted RBP3.99□□□□□ -1.77
PEX1YKL197C YDL121CQ07541 149 aa3.99□□□□□ -1.77
PEX1YKL197C AVO1Q08236 1176 aa3.99□□□□□ -1.77
PEX1YKL197C DNF2Q12675 1612 aa3.99□□□□□ -1.77
PEX1YKL197C PDR15Q04182 1529 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C STH1P32597 1359 aa3.99□□□□□ -1.77
PEX1YKL197C VAC17P25591 423 aa3.99□□□□□ -1.77
PEX1YKL197C PWP2P25635 923 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C RPL5P26321 297 aaKnown RBP3.99□□□□□ -1.77
PEX1YKL197C BIO2P32451 375 aa3.99□□□□□ -1.77
PEX1YKL197C HOS2P53096 452 aaPredicted RBP3.99□□□□□ -1.77
PEX1YKL197C CTF4Q01454 927 aa3.99□□□□□ -1.77
PEX1YKL197C ITT1Q04638 464 aa3.99□□□□□ -1.77
PEX1YKL197C IME2P32581 645 aa3.98□□□□□ -1.77
PEX1YKL197C RKM3P38222 552 aa3.98□□□□□ -1.77
PEX1YKL197C GGA1Q06336 557 aa3.98□□□□□ -1.77
PEX1YKL197C MET32Q12041 191 aa3.98□□□□□ -1.77
PEX1YKL197C TY3B-GQ99315 1547 aa3.98□□□□□ -1.77
PEX1YKL197C ARG8P18544 423 aa3.98□□□□□ -1.77
PEX1YKL197C FIG4P42837 879 aa3.98□□□□□ -1.77
PEX1YKL197C BFA1P47113 574 aa3.98□□□□□ -1.77
PEX1YKL197C TIM11P81449 96 aaPredicted RBP3.98□□□□□ -1.77
PEX1YKL197C RSC2Q06488 889 aa3.98□□□□□ -1.77
PEX1YKL197C YPR172WQ06608 200 aa3.98□□□□□ -1.77
PEX1YKL197C ERG12P07277 443 aa3.97□□□□□ -1.77
PEX1YKL197C SEC23P15303 768 aaKnown RBP3.97□□□□□ -1.77
PEX1YKL197C FRK1Q03002 865 aaPredicted RBP3.97□□□□□ -1.77
PEX1YKL197C SEC6P32844 805 aa3.97□□□□□ -1.77
PEX1YKL197C BYE1P36106 594 aa3.97□□□□□ -1.77
PEX1YKL197C ALD2P47771 506 aa3.97□□□□□ -1.77
PEX1YKL197C BNI5P53890 448 aaKnown RBP3.97□□□□□ -1.77
PEX1YKL197C RRP9Q06506 573 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms