RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W SAM37P50110 327 aa5.73□□□□□ -1.49
CTK1YKL139W ALD3P54114 506 aa5.73□□□□□ -1.49
CTK1YKL139W GAR1P28007 205 aaKnown RBP5.72□□□□□ -1.49
CTK1YKL139W VPS16Q03308 798 aa5.72□□□□□ -1.49
CTK1YKL139W RMD1Q03441 430 aa5.72□□□□□ -1.49
CTK1YKL139W Q0182Q9ZZW1 134 aa5.72□□□□□ -1.49
CTK1YKL139W YNL165WP53891 406 aa5.72□□□□□ -1.49
CTK1YKL139W FPR4Q06205 392 aaPredicted RBP5.72□□□□□ -1.49
CTK1YKL139W NOC3Q07896 663 aaPredicted RBP5.72□□□□□ -1.49
CTK1YKL139W OXR1Q08952 273 aa5.72□□□□□ -1.49
CTK1YKL139W YOL098CQ12496 1037 aa5.72□□□□□ -1.49
CTK1YKL139W LDH1P38139 375 aa5.71□□□□□ -1.5
CTK1YKL139W YGR122WP53272 402 aa5.71□□□□□ -1.5
CTK1YKL139W RSC4Q02206 625 aa5.71□□□□□ -1.5
CTK1YKL139W TOS4Q06266 489 aa5.71□□□□□ -1.5
CTK1YKL139W PIN2Q12057 282 aa5.71□□□□□ -1.5
CTK1YKL139W CYC8P14922 966 aa5.7□□□□□ -1.5
CTK1YKL139W BRN1P38170 754 aa5.7□□□□□ -1.5
CTK1YKL139W CIC1P38779 376 aaKnown RBP5.7□□□□□ -1.5
CTK1YKL139W ALA1P40825 983 aaKnown RBP5.7□□□□□ -1.5
CTK1YKL139W BSC2Q05611 235 aa5.7□□□□□ -1.5
CTK1YKL139W ESF1Q06344 628 aaKnown RBP5.7□□□□□ -1.5
CTK1YKL139W UTP4Q06679 776 aaKnown RBP5.7□□□□□ -1.5
CTK1YKL139W CLN2P20438 545 aa5.69□□□□□ -1.5
CTK1YKL139W MLF3P32047 452 aa5.69□□□□□ -1.5
CTK1YKL139W RAD55P38953 406 aa5.69□□□□□ -1.5
CTK1YKL139W QDR2P40474 542 aa5.69□□□□□ -1.5
CTK1YKL139W HED1Q03937 162 aa5.69□□□□□ -1.5
CTK1YKL139W DYS1P38791 387 aa5.68□□□□□ -1.5
CTK1YKL139W MSN1P22148 382 aa5.67□□□□□ -1.5
CTK1YKL139W FAA3P39002 694 aa5.67□□□□□ -1.5
CTK1YKL139W FIR1P40020 876 aa5.67□□□□□ -1.5
CTK1YKL139W RGD2P43556 714 aa5.67□□□□□ -1.5
CTK1YKL139W HXK1P04806 485 aaKnown RBP5.67□□□□□ -1.5
CTK1YKL139W RAD2P07276 1031 aa5.67□□□□□ -1.5
CTK1YKL139W PET112P33893 541 aa5.67□□□□□ -1.5
CTK1YKL139W RTT106P40161 455 aa5.67□□□□□ -1.5
CTK1YKL139W NTA1P40354 457 aa5.67□□□□□ -1.5
CTK1YKL139W GCR2Q01722 534 aa5.67□□□□□ -1.5
CTK1YKL139W INP54Q08227 384 aaKnown RBP5.67□□□□□ -1.5
CTK1YKL139W TIF6Q12522 245 aaKnown RBP5.67□□□□□ -1.5
CTK1YKL139W SPC42P36094 363 aa5.66□□□□□ -1.5
CTK1YKL139W SSN3P39073 555 aa5.66□□□□□ -1.5
CTK1YKL139W MET32Q12041 191 aa5.66□□□□□ -1.5
CTK1YKL139W SSF2Q12153 453 aaPredicted RBP5.66□□□□□ -1.5
CTK1YKL139W SRP40P32583 406 aaPredicted RBP5.65□□□□□ -1.5
CTK1YKL139W IRS4P36115 615 aaKnown RBP5.65□□□□□ -1.5
CTK1YKL139W PSY2P40164 858 aa5.65□□□□□ -1.5
CTK1YKL139W BRE2P43132 505 aa5.65□□□□□ -1.5
CTK1YKL139W JJJ2P46997 583 aa5.65□□□□□ -1.5
CTK1YKL139W CLA4P48562 842 aa5.65□□□□□ -1.5
CTK1YKL139W CWC24P53769 259 aa5.65□□□□□ -1.5
CTK1YKL139W DAL4Q04895 635 aa5.65□□□□□ -1.5
CTK1YKL139W WRS1Q12109 432 aaKnown RBP5.65□□□□□ -1.5
CTK1YKL139W RPS31P05759 152 aaKnown RBP5.64□□□□□ -1.51
CTK1YKL139W MNR2P35724 969 aa5.64□□□□□ -1.51
CTK1YKL139W SHM1P37292 490 aaPredicted RBP5.64□□□□□ -1.51
CTK1YKL139W YHL008CP38750 627 aa5.64□□□□□ -1.51
CTK1YKL139W IOC3P43596 787 aa5.64□□□□□ -1.51
CTK1YKL139W DOS2P54858 310 aa5.64□□□□□ -1.51
CTK1YKL139W UGA3P26370 528 aa5.63□□□□□ -1.51
CTK1YKL139W KAP122P32767 1081 aa5.63□□□□□ -1.51
CTK1YKL139W BSD2P38356 321 aa5.63□□□□□ -1.51
CTK1YKL139W NMD2P38798 1089 aaKnown RBP5.63□□□□□ -1.51
CTK1YKL139W YTA6P40328 754 aa5.63□□□□□ -1.51
CTK1YKL139W RNH70P53331 553 aa5.63□□□□□ -1.51
CTK1YKL139W YAF9P53930 226 aa5.63□□□□□ -1.51
CTK1YKL139W YKL091CP33324 310 aaKnown RBP5.63□□□□□ -1.51
CTK1YKL139W MRPS18P42847 217 aa5.63□□□□□ -1.51
CTK1YKL139W MSN5P52918 1224 aa5.63□□□□□ -1.51
CTK1YKL139W MTO1P53070 669 aa5.63□□□□□ -1.51
CTK1YKL139W YCS4Q06156 1176 aa5.63□□□□□ -1.51
CTK1YKL139W FLP1P03870 423 aa5.62□□□□□ -1.51
CTK1YKL139W PRP40P33203 583 aaKnown RBP5.62□□□□□ -1.51
CTK1YKL139W ISW1P38144 1129 aa5.62□□□□□ -1.51
CTK1YKL139W GIP1P38229 639 aa5.62□□□□□ -1.51
CTK1YKL139W AAD14P42884 376 aa5.62□□□□□ -1.51
CTK1YKL139W ARG82P07250 355 aa5.61□□□□□ -1.51
CTK1YKL139W PRE9P23638 258 aaKnown RBP5.61□□□□□ -1.51
CTK1YKL139W NAB2P32505 525 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51 RIP-Chip
CTK1YKL139W YOR296WQ08748 1289 aa5.61□□□□□ -1.51
CTK1YKL139W MCD1Q12158 566 aa5.61□□□□□ -1.51
CTK1YKL139W RPC31P17890 251 aa5.6□□□□□ -1.51
CTK1YKL139W IRE1P32361 1115 aa5.6□□□□□ -1.51
CTK1YKL139W UGA4P32837 571 aa5.6□□□□□ -1.51
CTK1YKL139W AHP1P38013 176 aaKnown RBP5.6□□□□□ -1.51
CTK1YKL139W YBR287WP38355 427 aa5.6□□□□□ -1.51
CTK1YKL139W YJL049WP47048 450 aa5.6□□□□□ -1.51
CTK1YKL139W NSE3Q05541 303 aa5.6□□□□□ -1.51
CTK1YKL139W MCM5P29496 775 aaKnown RBP5.59□□□□□ -1.51
CTK1YKL139W PPG1P32838 368 aa5.59□□□□□ -1.51
CTK1YKL139W MSB3P48566 633 aaPredicted RBP5.59□□□□□ -1.51
CTK1YKL139W CTR9P89105 1077 aa5.59□□□□□ -1.51
CTK1YKL139W GDE1Q02979 1223 aa5.59□□□□□ -1.51
CTK1YKL139W TY1A-DR3Q12441 440 aa5.59□□□□□ -1.51
CTK1YKL139W CIT2P08679 460 aa5.59□□□□□ -1.52
CTK1YKL139W DLD1P32891 587 aa5.59□□□□□ -1.52
CTK1YKL139W AIM46P38885 310 aa5.59□□□□□ -1.52
CTK1YKL139W FAA4P47912 694 aaKnown RBP5.59□□□□□ -1.52
CTK1YKL139W PSH1Q12161 406 aa5.59□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms