RNA–Protein interactions for RNA: YKL044W

YKL044W, Transcript of Protein of unknown function, yeast

Gene YKL044W, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL044W	YKL044W	AI1	P03875	834 aa		5.09	□□□□□ -1.59
YKL044W	YKL044W	FUR4	P05316	633 aa	Known RBP	5.09	□□□□□ -1.59
YKL044W	YKL044W	LDH1	P38139	375 aa		5.09	□□□□□ -1.59
YKL044W	YKL044W	SKP1	P52286	194 aa		5.09	□□□□□ -1.59
YKL044W	YKL044W	HEH2	Q03281	663 aa		5.09	□□□□□ -1.59
YKL044W	YKL044W	TPS3	P38426	1054 aa	Known RBP	5.08	□□□□□ -1.6
YKL044W	YKL044W	APM2	P38700	605 aa		5.08	□□□□□ -1.6
YKL044W	YKL044W	TY1A-DR2	Q03964	440 aa	Known RBP	5.08	□□□□□ -1.6
YKL044W	YKL044W	GPM1	P00950	247 aa	Known RBP	5.07	□□□□□ -1.6
YKL044W	YKL044W	RPC31	P17890	251 aa		5.07	□□□□□ -1.6
YKL044W	YKL044W	THI72	Q08579	599 aa		5.07	□□□□□ -1.6
YKL044W	YKL044W	MSC7	P38694	644 aa		5.06	□□□□□ -1.6
YKL044W	YKL044W	NSG2	P53898	299 aa		5.06	□□□□□ -1.6
YKL044W	YKL044W	PDC5	P16467	563 aa	Known RBP	5.05	□□□□□ -1.6
YKL044W	YKL044W	KNS1	P32350	737 aa	Predicted RBP	5.05	□□□□□ -1.6
YKL044W	YKL044W	GEF1	P37020	779 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	GIP1	P38229	639 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	YBR287W	P38355	427 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	FIR1	P40020	876 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	KAR5	Q04746	504 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	YOR296W	Q08748	1289 aa		5.05	□□□□□ -1.6
YKL044W	YKL044W	MDJ1	P35191	511 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	ISW1	P38144	1129 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	ICP55	P40051	511 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	YNR014W	P53719	212 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	YNR040W	P53736	256 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	PHM7	Q12252	991 aa		5.04	□□□□□ -1.6
YKL044W	YKL044W	MET1	P36150	593 aa		5.03	□□□□□ -1.6
YKL044W	YKL044W	BSD2	P38356	321 aa		5.03	□□□□□ -1.6
YKL044W	YKL044W	HXT8	P40886	569 aa		5.03	□□□□□ -1.6
YKL044W	YKL044W	SUT1	P53032	299 aa	Known RBP	5.03	□□□□□ -1.6
YKL044W	YKL044W	PUS1	Q12211	544 aa	Known RBP	5.03	□□□□□ -1.6
YKL044W	YKL044W	LSO1	Q3E827	93 aa		5.03	□□□□□ -1.6
YKL044W	YKL044W	MSN1	P22148	382 aa		5.02	□□□□□ -1.61
YKL044W	YKL044W	CDC3	P32457	520 aa	Known RBP	5.02	□□□□□ -1.61
YKL044W	YKL044W	BOL3	P39724	118 aa		5.02	□□□□□ -1.61
YKL044W	YKL044W	PRK1	P40494	810 aa		5.02	□□□□□ -1.61
YKL044W	YKL044W	SBE2	P42223	864 aa	Known RBP	5.02	□□□□□ -1.61
YKL044W	YKL044W	ITC1	P53125	1264 aa		5.02	□□□□□ -1.61
YKL044W	YKL044W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
YKL044W	YKL044W	BOI1	P38041	980 aa	Known RBP	5.01	□□□□□ -1.61
YKL044W	YKL044W	BOI2	P39969	1040 aa		5.01	□□□□□ -1.61
YKL044W	YKL044W	APC11	Q12157	165 aa		5.01	□□□□□ -1.61
YKL044W	YKL044W	GLO3	P38682	493 aa	Known RBP	5	□□□□□ -1.61
YKL044W	YKL044W	RSC2	Q06488	889 aa		5	□□□□□ -1.61
YKL044W	YKL044W	IDI1	P15496	288 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	RPB10	P22139	70 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	SMC1	P32908	1225 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	YER156C	P40093	338 aa	Known RBP	4.99	□□□□□ -1.61
YKL044W	YKL044W	YFL066C	P43538	392 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	MTC5	Q03897	1148 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	TDA6	Q06466	467 aa		4.99	□□□□□ -1.61
YKL044W	YKL044W	ALG14	P38242	237 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	AIM46	P38885	310 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	RAD55	P38953	406 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	YIL165C	P40446	119 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	QDR1	P40475	563 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	YPR053C	Q6Q5F3	151 aa		4.98	□□□□□ -1.61
YKL044W	YKL044W	PGM2	P37012	569 aa	Known RBP	4.97	□□□□□ -1.61
YKL044W	YKL044W	NTA1	P40354	457 aa		4.97	□□□□□ -1.61
YKL044W	YKL044W	ATG1	P53104	897 aa		4.97	□□□□□ -1.61
YKL044W	YKL044W	NHA1	Q99271	985 aa		4.97	□□□□□ -1.61
YKL044W	YKL044W	MCX1	P38323	520 aa	Predicted RBP	4.96	□□□□□ -1.62
YKL044W	YKL044W	RGD2	P43556	714 aa		4.96	□□□□□ -1.62
YKL044W	YKL044W	YJL181W	P46987	611 aa		4.96	□□□□□ -1.62
YKL044W	YKL044W	PPT1	P53043	513 aa		4.96	□□□□□ -1.62
YKL044W	YKL044W	YMR187C	Q03236	431 aa		4.96	□□□□□ -1.62
YKL044W	YKL044W	EMG1	Q06287	252 aa	Known RBP	4.96	□□□□□ -1.62
YKL044W	YKL044W	HAT1	Q12341	374 aa		4.96	□□□□□ -1.62
YKL044W	YKL044W	KTR2	P33550	425 aa		4.95	□□□□□ -1.62
YKL044W	YKL044W	IRS4	P36115	615 aa	Known RBP	4.95	□□□□□ -1.62
YKL044W	YKL044W	UFD2	P54860	961 aa		4.95	□□□□□ -1.62
YKL044W	YKL044W	GIS4	Q04233	774 aa		4.95	□□□□□ -1.62
YKL044W	YKL044W	MRP10	O75012	95 aa		4.94	□□□□□ -1.62
YKL044W	YKL044W	NAR1	P23503	491 aa	Known RBP	4.94	□□□□□ -1.62
YKL044W	YKL044W	GRS1	P38088	690 aa	Known RBP	4.94	□□□□□ -1.62
YKL044W	YKL044W	ACF4	P47129	309 aa		4.94	□□□□□ -1.62
YKL044W	YKL044W	TIF6	Q12522	245 aa	Known RBP	4.94	□□□□□ -1.62
YKL044W	YKL044W	PSY2	P40164	858 aa		4.93	□□□□□ -1.62
YKL044W	YKL044W	YBL113C	Q7M4S9	792 aa		4.93	□□□□□ -1.62
YKL044W	YKL044W	ERP5	P38819	212 aa		4.92	□□□□□ -1.62
YKL044W	YKL044W	SLP1	Q12232	587 aa		4.92	□□□□□ -1.62
YKL044W	YKL044W	INP51	P40559	946 aa	Known RBP	4.91	□□□□□ -1.62
YKL044W	YKL044W	LSB3	P43603	459 aa	Known RBP	4.91	□□□□□ -1.62
YKL044W	YKL044W	TRS120	Q04183	1289 aa		4.91	□□□□□ -1.62
YKL044W	YKL044W	TRL1	P09880	827 aa	Known RBP	4.9	□□□□□ -1.63
YKL044W	YKL044W	TAT1	P38085	619 aa		4.9	□□□□□ -1.63
YKL044W	YKL044W	SKN7	P38889	622 aa		4.9	□□□□□ -1.63
YKL044W	YKL044W	SOK2	P53438	785 aa	Predicted RBP	4.9	□□□□□ -1.63
YKL044W	YKL044W	YDR215C	Q12240	137 aa		4.9	□□□□□ -1.63
YKL044W	YKL044W	FUS1	P11710	512 aa		4.89	□□□□□ -1.63
YKL044W	YKL044W	ECM2	P38241	364 aa	Known RBP	4.89	□□□□□ -1.63
YKL044W	YKL044W	RRM3	P38766	723 aa		4.89	□□□□□ -1.63
YKL044W	YKL044W	GIP2	P40036	548 aa		4.89	□□□□□ -1.63
YKL044W	YKL044W	YCK2	P23292	546 aa	Known RBP	4.88	□□□□□ -1.63
YKL044W	YKL044W	SLN1	P39928	1220 aa	Predicted RBP	4.88	□□□□□ -1.63
YKL044W	YKL044W	TED1	P40533	473 aa		4.88	□□□□□ -1.63
YKL044W	YKL044W	MDJ2	P42834	146 aa		4.88	□□□□□ -1.63
YKL044W	YKL044W	LEM3	P42838	414 aa		4.88	□□□□□ -1.63
YKL044W	YKL044W	PRY1	P47032	299 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms