RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W YBL086CP38177 466 aa6.65□□□□□ -1.34
RPN12YFR052W KAR2P16474 682 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W GRX4P32642 244 aa6.64□□□□□ -1.35
RPN12YFR052W PRP40P33203 583 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RPN12YFR052W YNL115CP53925 644 aa6.64□□□□□ -1.35
RPN12YFR052W LCB5Q06147 687 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W EDE1P34216 1381 aa6.63□□□□□ -1.35
RPN12YFR052W RPO41P13433 1351 aaKnown RBP6.62□□□□□ -1.35
RPN12YFR052W TPD3P31383 635 aa6.62□□□□□ -1.35
RPN12YFR052W DSF2P38213 736 aa6.62□□□□□ -1.35
RPN12YFR052W MAM3Q12296 706 aa6.62□□□□□ -1.35
RPN12YFR052W CTH1P47976 325 aa6.61□□□□□ -1.35
RPN12YFR052W HST3P53687 447 aa6.61□□□□□ -1.35
RPN12YFR052W MEC3Q02574 474 aa6.61□□□□□ -1.35
RPN12YFR052W RRD1P40454 393 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W NUP42P49686 430 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W PAP2P53632 584 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W INP54Q08227 384 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W SSA2P10592 639 aaKnown RBP6.59□□□□□ -1.35
RPN12YFR052W YJR115WP47152 169 aa6.59□□□□□ -1.35
RPN12YFR052W ATG13Q06628 738 aa6.59□□□□□ -1.35
RPN12YFR052W HSP104P31539 908 aaKnown RBP6.58□□□□□ -1.36
RPN12YFR052W ALD2P47771 506 aa6.58□□□□□ -1.36
RPN12YFR052W NIS1P53939 407 aa6.58□□□□□ -1.36
RPN12YFR052W NUP145P49687 1317 aa6.57□□□□□ -1.36
RPN12YFR052W OSM1P21375 501 aaKnown RBP6.57□□□□□ -1.36
RPN12YFR052W UGA2P38067 497 aa6.57□□□□□ -1.36
RPN12YFR052W DSD1P53095 428 aa6.57□□□□□ -1.36
RPN12YFR052W AKL1P38080 1108 aaKnown RBP6.56□□□□□ -1.36
RPN12YFR052W HXT10P43581 546 aa6.56□□□□□ -1.36
RPN12YFR052W TEA1P47988 759 aa6.56□□□□□ -1.36
RPN12YFR052W RRP46P53256 223 aaPredicted RBP6.56□□□□□ -1.36
RPN12YFR052W PMD1P32634 1753 aa6.56□□□□□ -1.36
RPN12YFR052W PDC1P06169 563 aaKnown RBP6.55□□□□□ -1.36
RPN12YFR052W SPT7P35177 1332 aa6.54□□□□□ -1.36
RPN12YFR052W KXD1P53158 218 aa6.54□□□□□ -1.36
RPN12YFR052W YBP2P53169 641 aa6.53□□□□□ -1.36
RPN12YFR052W SPB4P25808 606 aaPredicted RBP6.52□□□□□ -1.37
RPN12YFR052W FAS2P19097 1887 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W GRX1P25373 110 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W NTH2P35172 780 aa6.51□□□□□ -1.37
RPN12YFR052W SYH1Q02875 849 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W RAD4P14736 754 aa6.5□□□□□ -1.37
RPN12YFR052W DIT2P21595 489 aa6.5□□□□□ -1.37
RPN12YFR052W FPK1P53739 893 aa6.5□□□□□ -1.37
RPN12YFR052W ALD3P54114 506 aa6.5□□□□□ -1.37
RPN12YFR052W CTF4Q01454 927 aa6.5□□□□□ -1.37
RPN12YFR052W AOS1Q06624 347 aa6.5□□□□□ -1.37
RPN12YFR052W ALE1Q08548 619 aa6.5□□□□□ -1.37
RPN12YFR052W BUG1Q12191 341 aa6.5□□□□□ -1.37
RPN12YFR052W RTR1P40084 226 aaPredicted RBP6.49□□□□□ -1.37
RPN12YFR052W KCC4P25389 1037 aa6.48□□□□□ -1.37
RPN12YFR052W ACO2P39533 789 aa6.48□□□□□ -1.37
RPN12YFR052W RIX7Q07844 837 aaKnown RBP6.48□□□□□ -1.37
RPN12YFR052W SLY41P22215 453 aa6.47□□□□□ -1.37
RPN12YFR052W TOS1P38288 455 aa6.47□□□□□ -1.37
RPN12YFR052W BUD27P43573 796 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPN12YFR052W MPP10P47083 593 aaKnown RBP6.47□□□□□ -1.37
RPN12YFR052W EAF6P47128 113 aa6.47□□□□□ -1.37
RPN12YFR052W RPA14P50106 137 aa6.47□□□□□ -1.37
RPN12YFR052W HPC2Q01448 625 aa6.47□□□□□ -1.37
RPN12YFR052W RMT2Q03305 412 aa6.47□□□□□ -1.37
RPN12YFR052W PRD1P25375 712 aa6.46□□□□□ -1.38
RPN12YFR052W MRT4P33201 236 aaKnown RBP6.46□□□□□ -1.38
RPN12YFR052W YPR097WQ06839 1073 aa6.46□□□□□ -1.38
RPN12YFR052W YBR287WP38355 427 aa6.45□□□□□ -1.38
RPN12YFR052W PTK2P47116 818 aaKnown RBP6.45□□□□□ -1.38
RPN12YFR052W UTP22P53254 1237 aaPredicted RBP6.45□□□□□ -1.38
RPN12YFR052W CTI6Q08923 506 aa6.45□□□□□ -1.38
RPN12YFR052W NYV1Q12255 253 aa6.45□□□□□ -1.38
RPN12YFR052W HKR1P41809 1802 aa6.45□□□□□ -1.38
RPN12YFR052W PUS6P53294 404 aa6.44□□□□□ -1.38
RPN12YFR052W YNL050CP53952 270 aa6.44□□□□□ -1.38
RPN12YFR052W THI22Q06490 572 aa6.44□□□□□ -1.38
RPN12YFR052W OPT2Q06593 877 aa6.44□□□□□ -1.38
RPN12YFR052W ALR1Q08269 859 aa6.44□□□□□ -1.38
RPN12YFR052W YDL206WQ12424 762 aa6.44□□□□□ -1.38
RPN12YFR052W UGA3P26370 528 aa6.43□□□□□ -1.38
RPN12YFR052W SER1P33330 395 aaKnown RBP6.43□□□□□ -1.38
RPN12YFR052W MSN5P52918 1224 aa6.43□□□□□ -1.38
RPN12YFR052W YGL082WP53155 381 aa6.43□□□□□ -1.38
RPN12YFR052W CAF120P53836 1060 aa6.43□□□□□ -1.38
RPN12YFR052W RTT109Q07794 436 aa6.43□□□□□ -1.38
RPN12YFR052W SSA1P10591 642 aaKnown RBP6.42□□□□□ -1.38
RPN12YFR052W APL2P36000 726 aaPredicted RBP6.42□□□□□ -1.38
RPN12YFR052W ZDS2P54786 942 aa6.42□□□□□ -1.38
RPN12YFR052W YDL144CQ07589 356 aa6.42□□□□□ -1.38
RPN12YFR052W DUR1,2P32528 1835 aaKnown RBP6.41□□□□□ -1.38
RPN12YFR052W COQ4O13525 335 aa6.41□□□□□ -1.38
RPN12YFR052W SCJ1P25303 377 aa6.41□□□□□ -1.38
RPN12YFR052W RRT14P40470 206 aa6.41□□□□□ -1.38
RPN12YFR052W SAP155P43612 1002 aa6.41□□□□□ -1.38
RPN12YFR052W ZDS1P50111 915 aaKnown RBP6.41□□□□□ -1.38
RPN12YFR052W HST2P53686 357 aa6.41□□□□□ -1.38
RPN12YFR052W NSE3Q05541 303 aa6.41□□□□□ -1.38
RPN12YFR052W TRM1P15565 570 aaKnown RBP6.4□□□□□ -1.38
RPN12YFR052W ARG8P18544 423 aa6.4□□□□□ -1.38
RPN12YFR052W GLY1P37303 387 aaKnown RBP6.4□□□□□ -1.38
RPN12YFR052W YFR016CP43597 1233 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms