RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	IRE1	P32361	1115 aa		5.22	□□□□□ -1.57
UBP6	YFR010W	TOM20	P35180	183 aa		5.22	□□□□□ -1.57
UBP6	YFR010W	MCM1	P11746	286 aa		5.21	□□□□□ -1.58
UBP6	YFR010W	KIP3	P53086	805 aa	Known RBP	5.21	□□□□□ -1.58
UBP6	YFR010W	GAS4	Q08271	471 aa		5.21	□□□□□ -1.58
UBP6	YFR010W	EBP2	P36049	427 aa	Known RBP	5.2	□□□□□ -1.58
UBP6	YFR010W	NNF1	P47149	201 aa		5.2	□□□□□ -1.58
UBP6	YFR010W	ROM1	P53046	1155 aa		5.2	□□□□□ -1.58
UBP6	YFR010W	NSG2	P53898	299 aa		5.2	□□□□□ -1.58
UBP6	YFR010W	PSH1	Q12161	406 aa		5.2	□□□□□ -1.58
UBP6	YFR010W	UBP1	P25037	809 aa		5.19	□□□□□ -1.58
UBP6	YFR010W	PDC6	P26263	563 aa	Known RBP	5.19	□□□□□ -1.58
UBP6	YFR010W	JJJ3	P47138	172 aa		5.19	□□□□□ -1.58
UBP6	YFR010W	YNL165W	P53891	406 aa		5.19	□□□□□ -1.58
UBP6	YFR010W	RPS31	P05759	152 aa	Known RBP	5.18	□□□□□ -1.58
UBP6	YFR010W	DIT1	P21623	536 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	ISW1	P38144	1129 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	TY4A-J	P47023	414 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	ECM23	Q02710	187 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	BRE1	Q07457	700 aa	Known RBP	5.18	□□□□□ -1.58
UBP6	YFR010W	RLP24	Q07915	199 aa	Known RBP	5.18	□□□□□ -1.58
UBP6	YFR010W	CEM1	P39525	442 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	YMR265C	Q03508	461 aa	Known RBP	5.18	□□□□□ -1.58
UBP6	YFR010W	THI72	Q08579	599 aa		5.18	□□□□□ -1.58
UBP6	YFR010W	PUP1	P25043	261 aa		5.17	□□□□□ -1.58
UBP6	YFR010W	MLF3	P32047	452 aa		5.17	□□□□□ -1.58
UBP6	YFR010W	PMC1	P38929	1173 aa	Predicted RBP	5.17	□□□□□ -1.58
UBP6	YFR010W	RNH70	P53331	553 aa		5.17	□□□□□ -1.58
UBP6	YFR010W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
UBP6	YFR010W	GAL11	P19659	1081 aa		5.16	□□□□□ -1.58
UBP6	YFR010W	KRE33	P53914	1056 aa	Known RBP	5.16	□□□□□ -1.58
UBP6	YFR010W	SYT1	Q06836	1226 aa		5.16	□□□□□ -1.58
UBP6	YFR010W	UBX7	P38349	436 aa		5.15	□□□□□ -1.58
UBP6	YFR010W	TPM2	P40414	161 aa		5.15	□□□□□ -1.58
UBP6	YFR010W	AIM21	P40563	679 aa		5.15	□□□□□ -1.58
UBP6	YFR010W	ALD2	P47771	506 aa		5.15	□□□□□ -1.58
UBP6	YFR010W	NOB1	Q08444	459 aa	Known RBP	5.15	□□□□□ -1.58
UBP6	YFR010W	YDR461C-A	Q2V2P7	80 aa		5.15	□□□□□ -1.58
UBP6	YFR010W	LEU1	P07264	779 aa	Known RBP	5.14	□□□□□ -1.59
UBP6	YFR010W	RAD2	P07276	1031 aa		5.14	□□□□□ -1.59
UBP6	YFR010W	NGR1	P32831	672 aa	Known RBP	5.14	□□□□□ -1.59
UBP6	YFR010W	RPS0A	P32905	252 aa	Known RBP	5.14	□□□□□ -1.59
UBP6	YFR010W	RRP14	P36080	434 aa	Known RBP	5.14	□□□□□ -1.59
UBP6	YFR010W	MRPL16	P38064	232 aa		5.14	□□□□□ -1.59
UBP6	YFR010W	RPT2	P40327	437 aa	Known RBP	5.14	□□□□□ -1.59
UBP6	YFR010W	HAT1	Q12341	374 aa		5.14	□□□□□ -1.59
UBP6	YFR010W	STB3	Q12427	513 aa		5.14	□□□□□ -1.59
UBP6	YFR010W	Q0182	Q9ZZW1	134 aa		5.14	□□□□□ -1.59
UBP6	YFR010W	VAN1	P23642	535 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	TSR4	P25040	408 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	HXT5	P38695	592 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	FPR3	P38911	411 aa	Known RBP	5.13	□□□□□ -1.59
UBP6	YFR010W	STM1	P39015	273 aa	Known RBP	5.13	□□□□□ -1.59
UBP6	YFR010W	YTA6	P40328	754 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	ADE12	P80210	433 aa	Known RBP	5.13	□□□□□ -1.59
UBP6	YFR010W	AI1	P03875	834 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	SCD5	P34758	872 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	YML083C	Q04526	418 aa		5.13	□□□□□ -1.59
UBP6	YFR010W	RPA135	P22138	1203 aa	Known RBP	5.12	□□□□□ -1.59
UBP6	YFR010W	SEC20	P28791	383 aa		5.12	□□□□□ -1.59
UBP6	YFR010W	GIR2	Q03768	265 aa	Predicted RBP	5.12	□□□□□ -1.59
UBP6	YFR010W	UTP4	Q06679	776 aa	Known RBP	5.12	□□□□□ -1.59
UBP6	YFR010W	YDL121C	Q07541	149 aa		5.12	□□□□□ -1.59
UBP6	YFR010W	YOL098C	Q12496	1037 aa		5.12	□□□□□ -1.59
UBP6	YFR010W	TRS33	Q99394	268 aa		5.12	□□□□□ -1.59
UBP6	YFR010W	SUV3	P32580	737 aa		5.11	□□□□□ -1.59
UBP6	YFR010W	IPL1	P38991	367 aa		5.11	□□□□□ -1.59
UBP6	YFR010W	SPR3	P41901	512 aa		5.11	□□□□□ -1.59
UBP6	YFR010W	SSB1	P11484	613 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	RGP1	P16664	663 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	VMA4	P22203	233 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	FPS1	P23900	669 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	PPG1	P32838	368 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	MPE1	P35728	441 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	BOI2	P39969	1040 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	SSB2	P40150	613 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	NOP2	P40991	618 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	YFL066C	P43538	392 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	CCT8	P47079	568 aa	Known RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	CAB1	Q04430	367 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	SVF1	Q05515	481 aa		5.1	□□□□□ -1.59
UBP6	YFR010W	RRP15	Q06511	250 aa	Predicted RBP	5.1	□□□□□ -1.59
UBP6	YFR010W	CWH41	P53008	833 aa		5.09	□□□□□ -1.59
UBP6	YFR010W	TMA64	Q04600	565 aa	Known RBP	5.09	□□□□□ -1.59
UBP6	YFR010W	YOL057W	Q08225	711 aa		5.09	□□□□□ -1.59
UBP6	YFR010W	ERP2	P39704	215 aa		5.08	□□□□□ -1.6
UBP6	YFR010W	MPP10	P47083	593 aa	Known RBP	5.08	□□□□□ -1.6
UBP6	YFR010W	MTO1	P53070	669 aa		5.08	□□□□□ -1.6
UBP6	YFR010W	FOX2	Q02207	900 aa	Known RBP	5.08	□□□□□ -1.6
UBP6	YFR010W	SBP1	P10080	294 aa	Known RBP	5.07	□□□□□ -1.6
UBP6	YFR010W	MSC7	P38694	644 aa		5.07	□□□□□ -1.6
UBP6	YFR010W	POL5	P39985	1022 aa	Known RBP	5.07	□□□□□ -1.6
UBP6	YFR010W	ALG12	P53730	551 aa		5.07	□□□□□ -1.6
UBP6	YFR010W	YPR053C	Q6Q5F3	151 aa		5.07	□□□□□ -1.6
UBP6	YFR010W	GPM1	P00950	247 aa	Known RBP	5.06	□□□□□ -1.6
UBP6	YFR010W	RPP1A	P05318	106 aa	Predicted RBP	5.06	□□□□□ -1.6
UBP6	YFR010W	NOC2	P39744	710 aa	Known RBP	5.06	□□□□□ -1.6
UBP6	YFR010W	VPS27	P40343	622 aa	Known RBP	5.06	□□□□□ -1.6
UBP6	YFR010W	TY1A-DR2	Q03964	440 aa	Known RBP	5.06	□□□□□ -1.6
UBP6	YFR010W	PUF6	Q04373	656 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms