RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C AMS1P22855 1083 aa5.31□□□□□ -1.56
OTU1YFL044C YPP1P46951 817 aa5.31□□□□□ -1.56
OTU1YFL044C ALD2P47771 506 aa5.31□□□□□ -1.56
OTU1YFL044C NOP7P53261 605 aaKnown RBP5.31□□□□□ -1.56
OTU1YFL044C FRK1Q03002 865 aaPredicted RBP5.31□□□□□ -1.56
OTU1YFL044C TAF8Q03750 510 aa5.31□□□□□ -1.56
OTU1YFL044C SUB2Q07478 446 aaKnown RBP5.31□□□□□ -1.56
OTU1YFL044C PPH3P32345 308 aa5.3□□□□□ -1.56
OTU1YFL044C HXT10P43581 546 aa5.3□□□□□ -1.56
OTU1YFL044C MSB3P48566 633 aaPredicted RBP5.3□□□□□ -1.56
OTU1YFL044C YML020WQ03722 664 aa5.3□□□□□ -1.56
OTU1YFL044C MCM16Q12262 181 aa5.29□□□□□ -1.56
OTU1YFL044C YEL077CQ3E7X8 1277 aa5.29□□□□□ -1.56
OTU1YFL044C YIL177CP40434 1758 aa5.29□□□□□ -1.56
OTU1YFL044C YJL225CP40889 1758 aa5.29□□□□□ -1.56
OTU1YFL044C ENO1P00924 437 aaKnown RBP5.28□□□□□ -1.56
OTU1YFL044C TEC1P18412 486 aa5.28□□□□□ -1.56
OTU1YFL044C TPD3P31383 635 aa5.28□□□□□ -1.56
OTU1YFL044C TTI1P36097 1038 aa5.28□□□□□ -1.56
OTU1YFL044C CST6P40535 587 aa5.28□□□□□ -1.56
OTU1YFL044C FOX2Q02207 900 aaKnown RBP5.28□□□□□ -1.56
OTU1YFL044C TCB1Q12466 1186 aa5.28□□□□□ -1.56
OTU1YFL044C APC1P53886 1748 aa5.28□□□□□ -1.56
OTU1YFL044C FIG4P42837 879 aa5.27□□□□□ -1.57
OTU1YFL044C YJL181WP46987 611 aa5.27□□□□□ -1.57
OTU1YFL044C RIM21P48565 533 aa5.27□□□□□ -1.57
OTU1YFL044C PRP43P53131 767 aaKnown RBP5.27□□□□□ -1.57
OTU1YFL044C SRC1Q03707 834 aa5.27□□□□□ -1.57
OTU1YFL044C SLM3Q12093 417 aa5.27□□□□□ -1.57
OTU1YFL044C MOD5P07884 428 aa5.26□□□□□ -1.57
OTU1YFL044C GUT2P32191 649 aa5.26□□□□□ -1.57
OTU1YFL044C SIS2P36024 562 aa5.26□□□□□ -1.57
OTU1YFL044C GEF1P37020 779 aa5.26□□□□□ -1.57
OTU1YFL044C SLX8P40072 274 aa5.26□□□□□ -1.57
OTU1YFL044C CLA4P48562 842 aa5.26□□□□□ -1.57
OTU1YFL044C STE20Q03497 939 aaKnown RBP5.26□□□□□ -1.57
OTU1YFL044C MRX10Q05648 414 aa5.26□□□□□ -1.57
OTU1YFL044C SNF2P22082 1703 aa5.26□□□□□ -1.57
OTU1YFL044C PRP40P33203 583 aaKnown RBP5.25□□□□□ -1.57
OTU1YFL044C EMP47P43555 445 aa5.25□□□□□ -1.57
OTU1YFL044C VAC17P25591 423 aa5.24□□□□□ -1.57
OTU1YFL044C ISF1P32488 338 aa5.24□□□□□ -1.57
OTU1YFL044C AIR1P40507 360 aaKnown RBP5.24□□□□□ -1.57
OTU1YFL044C BDP1P46678 594 aa5.24□□□□□ -1.57
OTU1YFL044C NOP8Q08287 484 aaPredicted RBP5.24□□□□□ -1.57
OTU1YFL044C YKR075CP36155 307 aa5.23□□□□□ -1.57
OTU1YFL044C ATG3P40344 310 aa5.23□□□□□ -1.57
OTU1YFL044C MTR4P47047 1073 aaKnown RBP5.23□□□□□ -1.57
OTU1YFL044C RPL34AP87262 121 aaPredicted RBP5.23□□□□□ -1.57
OTU1YFL044C PUS5Q06244 254 aa5.23□□□□□ -1.57
OTU1YFL044C FRA1Q07825 749 aa5.23□□□□□ -1.57
OTU1YFL044C RIM15P43565 1770 aa5.23□□□□□ -1.57
OTU1YFL044C SPT7P35177 1332 aa5.23□□□□□ -1.57
OTU1YFL044C LEU2P04173 364 aaPredicted RBP5.22□□□□□ -1.57
OTU1YFL044C KIP2P28743 706 aa5.22□□□□□ -1.57
OTU1YFL044C YKL133CP36066 463 aa5.22□□□□□ -1.57
OTU1YFL044C YPR084WQ06821 456 aa5.22□□□□□ -1.57
OTU1YFL044C SPE2P21182 396 aa5.21□□□□□ -1.58
OTU1YFL044C IXR1P33417 597 aa5.21□□□□□ -1.58
OTU1YFL044C EAF6P47128 113 aa5.21□□□□□ -1.58
OTU1YFL044C MLP1Q02455 1875 aaKnown RBP5.2□□□□□ -1.58
OTU1YFL044C VPS13Q07878 3144 aa5.2□□□□□ -1.58
OTU1YFL044C COBP00163 385 aa5.2□□□□□ -1.58
OTU1YFL044C TGL4P36165 910 aa5.2□□□□□ -1.58
OTU1YFL044C ENP1P38333 483 aaKnown RBP5.2□□□□□ -1.58
OTU1YFL044C KTR7P40504 517 aa5.2□□□□□ -1.58
OTU1YFL044C SYH1Q02875 849 aaKnown RBP5.2□□□□□ -1.58
OTU1YFL044C NOB1Q08444 459 aaKnown RBP5.2□□□□□ -1.58
OTU1YFL044C TRK1P12685 1235 aa5.19□□□□□ -1.58
OTU1YFL044C RDS2P19541 446 aaKnown RBP5.19□□□□□ -1.58
OTU1YFL044C PUP1P25043 261 aa5.19□□□□□ -1.58
OTU1YFL044C YRF1-4O13559 1382 aa5.18□□□□□ -1.58
OTU1YFL044C YLR419WQ06698 1435 aaKnown RBP5.18□□□□□ -1.58
OTU1YFL044C PEP12P32854 288 aa5.18□□□□□ -1.58
OTU1YFL044C XKS1P42826 600 aa5.18□□□□□ -1.58
OTU1YFL044C YML083CQ04526 418 aa5.18□□□□□ -1.58
OTU1YFL044C UTP13Q05946 817 aaKnown RBP5.18□□□□□ -1.58
OTU1YFL044C RPS24AP0CX31 135 aaKnown RBP5.17□□□□□ -1.58
OTU1YFL044C RPS24BP0CX32 135 aaKnown RBP5.17□□□□□ -1.58
OTU1YFL044C SOH1P38633 127 aa5.17□□□□□ -1.58
OTU1YFL044C KIP3P53086 805 aaKnown RBP5.17□□□□□ -1.58
OTU1YFL044C ALD3P54114 506 aa5.17□□□□□ -1.58
OTU1YFL044C MEC3Q02574 474 aa5.17□□□□□ -1.58
OTU1YFL044C ECM23Q02710 187 aa5.17□□□□□ -1.58
OTU1YFL044C SIR4P11978 1358 aa5.16□□□□□ -1.58
OTU1YFL044C SCT1P32784 759 aa5.16□□□□□ -1.58
OTU1YFL044C CHZ1P40019 153 aaPredicted RBP5.16□□□□□ -1.58
OTU1YFL044C APL6P46682 809 aa5.16□□□□□ -1.58
OTU1YFL044C DUS1P53759 423 aaKnown RBP5.16□□□□□ -1.58
OTU1YFL044C YML133CQ03099 1374 aa5.15□□□□□ -1.59
OTU1YFL044C YPR117WQ06116 2489 aa5.15□□□□□ -1.59
OTU1YFL044C YLL067CQ07888 1374 aa5.15□□□□□ -1.59
OTU1YFL044C YLL066CQ99208 1374 aa5.15□□□□□ -1.59
OTU1YFL044C SQS1P53866 767 aaKnown RBP5.14□□□□□ -1.59
OTU1YFL044C HED1Q03937 162 aa5.14□□□□□ -1.59
OTU1YFL044C ISR1Q06098 443 aaKnown RBP5.14□□□□□ -1.59
OTU1YFL044C ATG20Q07528 640 aa5.14□□□□□ -1.59
OTU1YFL044C GAL2P13181 574 aa5.13□□□□□ -1.59
OTU1YFL044C UBX7P38349 436 aa5.13□□□□□ -1.59
OTU1YFL044C EMW1P42842 904 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms