RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C VTH1P40438 1549 aa2.07□□□□□ -2.08
UBP3YER151C VTH2P40890 1549 aa2.07□□□□□ -2.08
UBP3YER151C DAT1P13483 248 aaKnown RBP2.07□□□□□ -2.08
UBP3YER151C VTC4P47075 721 aa2.07□□□□□ -2.08
UBP3YER151C AVT1P47082 602 aa2.07□□□□□ -2.08
UBP3YER151C MCA1Q08601 432 aa2.07□□□□□ -2.08
UBP3YER151C YJU3P28321 313 aa2.06□□□□□ -2.08
UBP3YER151C SLN1P39928 1220 aaPredicted RBP2.06□□□□□ -2.08
UBP3YER151C MMS1Q06211 1407 aa2.06□□□□□ -2.08
UBP3YER151C RPS9BP05755 195 aaKnown RBP2.06□□□□□ -2.08
UBP3YER151C ESS1P22696 170 aa2.06□□□□□ -2.08
UBP3YER151C KTR1P27810 393 aaKnown RBP2.06□□□□□ -2.08
UBP3YER151C ATF2P53296 535 aa2.06□□□□□ -2.08
UBP3YER151C YPR084WQ06821 456 aa2.06□□□□□ -2.08
UBP3YER151C SNF2P22082 1703 aa2.06□□□□□ -2.08
UBP3YER151C ARG8P18544 423 aa2.05□□□□□ -2.08
UBP3YER151C SPB4P25808 606 aaPredicted RBP2.05□□□□□ -2.08
UBP3YER151C FBP26P32604 452 aa2.05□□□□□ -2.08
UBP3YER151C FIG4P42837 879 aa2.05□□□□□ -2.08
UBP3YER151C YTA7P40340 1379 aa2.05□□□□□ -2.08
UBP3YER151C STE6P12866 1290 aa2.05□□□□□ -2.08
UBP3YER151C DAL1P32375 460 aa2.05□□□□□ -2.08
UBP3YER151C YDR215CQ12240 137 aa2.05□□□□□ -2.08
UBP3YER151C YDR461C-AQ2V2P7 80 aa2.05□□□□□ -2.08
UBP3YER151C TBS1P38114 1094 aa2.04□□□□□ -2.08
UBP3YER151C YSP2Q06681 1438 aa2.04□□□□□ -2.08
UBP3YER151C YCK2P23292 546 aaKnown RBP2.04□□□□□ -2.08
UBP3YER151C COQ2P32378 372 aa2.04□□□□□ -2.08
UBP3YER151C LIP5P32875 414 aa2.04□□□□□ -2.08
UBP3YER151C PRY1P47032 299 aa2.04□□□□□ -2.08
UBP3YER151C TEC1P18412 486 aa2.03□□□□□ -2.08
UBP3YER151C PKH3Q03306 898 aaPredicted RBP2.03□□□□□ -2.08
UBP3YER151C GPM1P00950 247 aaKnown RBP2.03□□□□□ -2.09
UBP3YER151C YNR021WP53723 404 aaKnown RBP2.03□□□□□ -2.09
UBP3YER151C GEA1P47102 1408 aaPredicted RBP2.02□□□□□ -2.09
UBP3YER151C STH1P32597 1359 aa2.02□□□□□ -2.09
UBP3YER151C NAF1P53919 492 aaKnown RBP2.02□□□□□ -2.09
UBP3YER151C ATG20Q07528 640 aa2.02□□□□□ -2.09
UBP3YER151C SLA1P32790 1244 aa2.02□□□□□ -2.09
UBP3YER151C TSC11P40061 1430 aa2.01□□□□□ -2.09
UBP3YER151C GUT2P32191 649 aa2.01□□□□□ -2.09
UBP3YER151C ISU1Q03020 165 aa2.01□□□□□ -2.09
UBP3YER151C AIM7Q12156 149 aa2.01□□□□□ -2.09
UBP3YER151C YBT1P32386 1661 aa2.01□□□□□ -2.09
UBP3YER151C TY3B-IQ7LHG5 1498 aaKnown RBP2□□□□□ -2.09
UBP3YER151C SSN3P39073 555 aa2□□□□□ -2.09
UBP3YER151C APL6P46682 809 aa1.99□□□□□ -2.09
UBP3YER151C MSN5P52918 1224 aa1.99□□□□□ -2.09
UBP3YER151C FRA1Q07825 749 aa1.99□□□□□ -2.09
UBP3YER151C TY1A-DR3Q12441 440 aa1.99□□□□□ -2.09
UBP3YER151C GLC3P32775 704 aa1.99□□□□□ -2.09
UBP3YER151C RAD59Q12223 238 aa1.99□□□□□ -2.09
UBP3YER151C STB3Q12427 513 aa1.99□□□□□ -2.09
UBP3YER151C RPP1AP05318 106 aaPredicted RBP1.98□□□□□ -2.09
UBP3YER151C UTR2P32623 467 aa1.98□□□□□ -2.09
UBP3YER151C MRPL16P38064 232 aa1.98□□□□□ -2.09
UBP3YER151C CSN12P47130 423 aa1.98□□□□□ -2.09
UBP3YER151C URN1Q06525 465 aaKnown RBP1.98□□□□□ -2.09
UBP3YER151C WTM2Q12206 467 aa1.98□□□□□ -2.09
UBP3YER151C GCN2P15442 1659 aa1.98□□□□□ -2.09
UBP3YER151C MAK16P10962 306 aaPredicted RBP1.98□□□□□ -2.09
UBP3YER151C KNS1P32350 737 aaPredicted RBP1.98□□□□□ -2.09
UBP3YER151C UTP7P40055 554 aaKnown RBP1.98□□□□□ -2.09
UBP3YER151C MED7Q08278 222 aa1.98□□□□□ -2.09
UBP3YER151C TPS3P38426 1054 aaKnown RBP1.97□□□□□ -2.09
UBP3YER151C SPT2P06843 333 aaPredicted RBP1.97□□□□□ -2.09
UBP3YER151C PDC5P16467 563 aaKnown RBP1.97□□□□□ -2.09
UBP3YER151C STE20Q03497 939 aaKnown RBP1.97□□□□□ -2.09
UBP3YER151C NHA1Q99271 985 aa1.97□□□□□ -2.09
UBP3YER151C ALG14P38242 237 aa1.97□□□□□ -2.09
UBP3YER151C YKL222CP35995 705 aa1.96□□□□□ -2.1
UBP3YER151C KAE1P36132 386 aa1.96□□□□□ -2.1
UBP3YER151C YTA6P40328 754 aa1.96□□□□□ -2.1
UBP3YER151C YIL177CP40434 1758 aa1.96□□□□□ -2.1
UBP3YER151C YJL225CP40889 1758 aa1.96□□□□□ -2.1
UBP3YER151C INP52P50942 1183 aa1.96□□□□□ -2.1
UBP3YER151C SEC7P11075 2009 aaKnown RBP1.95□□□□□ -2.1
UBP3YER151C USO1P25386 1790 aa1.95□□□□□ -2.1
UBP3YER151C AOS1Q06624 347 aa1.95□□□□□ -2.1
UBP3YER151C NUP192P47054 1683 aa1.95□□□□□ -2.1
UBP3YER151C IRE1P32361 1115 aa1.95□□□□□ -2.1
UBP3YER151C SCT1P32784 759 aa1.95□□□□□ -2.1
UBP3YER151C TOS1P38288 455 aa1.95□□□□□ -2.1
UBP3YER151C MRX12P47084 519 aa1.95□□□□□ -2.1
UBP3YER151C YLR419WQ06698 1435 aaKnown RBP1.94□□□□□ -2.1
UBP3YER151C SHM1P37292 490 aaPredicted RBP1.94□□□□□ -2.1
UBP3YER151C RPS31P05759 152 aaKnown RBP1.93□□□□□ -2.1
UBP3YER151C HAL5P38970 855 aaKnown RBP1.93□□□□□ -2.1
UBP3YER151C BNR1P40450 1375 aa1.93□□□□□ -2.1
UBP3YER151C CSE4P36012 229 aa1.93□□□□□ -2.1
UBP3YER151C UBP5P39944 805 aa1.93□□□□□ -2.1
UBP3YER151C SPR3P41901 512 aa1.93□□□□□ -2.1
UBP3YER151C SUM1P46676 1062 aa1.93□□□□□ -2.1
UBP3YER151C JJJ2P46997 583 aa1.93□□□□□ -2.1
UBP3YER151C ISR1Q06098 443 aaKnown RBP1.93□□□□□ -2.1
UBP3YER151C SSA2P10592 639 aaKnown RBP1.92□□□□□ -2.1
UBP3YER151C SLX8P40072 274 aa1.92□□□□□ -2.1
UBP3YER151C TY1A-DR2Q03964 440 aaKnown RBP1.92□□□□□ -2.1
UBP3YER151C YPQ2Q06328 317 aa1.92□□□□□ -2.1
UBP3YER151C UTP13Q05946 817 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms