RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W OXR1Q08952 273 aa6.83□□□□□ -1.32
UBC6YER100W STI1P15705 589 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
UBC6YER100W KIP2P28743 706 aa6.82□□□□□ -1.32
UBC6YER100W RPS26AP39938 119 aaKnown RBP6.82□□□□□ -1.32
UBC6YER100W RPS26BP39939 119 aaKnown RBP6.82□□□□□ -1.32
UBC6YER100W NSE3Q05541 303 aa6.82□□□□□ -1.32
UBC6YER100W TOP1P04786 769 aa6.81□□□□□ -1.32
UBC6YER100W STE6P12866 1290 aa6.81□□□□□ -1.32
UBC6YER100W SYH1Q02875 849 aaKnown RBP6.81□□□□□ -1.32
UBC6YER100W WRS1Q12109 432 aaKnown RBP6.81□□□□□ -1.32
UBC6YER100W CIT2P08679 460 aa6.8□□□□□ -1.32
UBC6YER100W YKL091CP33324 310 aaKnown RBP6.8□□□□□ -1.32
UBC6YER100W MKS1P34072 584 aa6.8□□□□□ -1.32
UBC6YER100W UTP4Q06679 776 aaKnown RBP6.8□□□□□ -1.32
UBC6YER100W HXK1P04806 485 aaKnown RBP6.79□□□□□ -1.32
UBC6YER100W DAT1P13483 248 aaKnown RBP6.79□□□□□ -1.32
UBC6YER100W PEP7P32609 515 aa6.79□□□□□ -1.32
UBC6YER100W PET112P33893 541 aa6.79□□□□□ -1.32
UBC6YER100W SUT1P53032 299 aaKnown RBP6.79□□□□□ -1.32
UBC6YER100W NOC3Q07896 663 aaPredicted RBP6.79□□□□□ -1.32
UBC6YER100W WTM2Q12206 467 aa6.79□□□□□ -1.32
UBC6YER100W RAD2P07276 1031 aa6.78□□□□□ -1.32
UBC6YER100W PPG1P32838 368 aa6.78□□□□□ -1.32
UBC6YER100W MRT4P33201 236 aaKnown RBP6.78□□□□□ -1.32
UBC6YER100W HXT8P40886 569 aa6.78□□□□□ -1.32
UBC6YER100W BUD6P41697 788 aa6.78□□□□□ -1.32
UBC6YER100W ALG12P53730 551 aa6.78□□□□□ -1.32
UBC6YER100W APP1P53933 587 aa6.78□□□□□ -1.32
UBC6YER100W BSC2Q05611 235 aa6.77□□□□□ -1.33
UBC6YER100W VMA3P25515 160 aa6.76□□□□□ -1.33
UBC6YER100W SUM1P46676 1062 aa6.76□□□□□ -1.33
UBC6YER100W MCD1Q12158 566 aa6.76□□□□□ -1.33
UBC6YER100W MRF1P30775 413 aaPredicted RBP6.75□□□□□ -1.33
UBC6YER100W YBL086CP38177 466 aa6.75□□□□□ -1.33
UBC6YER100W NTA1P40354 457 aa6.75□□□□□ -1.33
UBC6YER100W BDF2Q07442 638 aa6.75□□□□□ -1.33
UBC6YER100W LDH1P38139 375 aa6.74□□□□□ -1.33
UBC6YER100W TOS4Q06266 489 aa6.74□□□□□ -1.33
UBC6YER100W YOR131CQ12486 218 aa6.74□□□□□ -1.33
UBC6YER100W PRE9P23638 258 aaKnown RBP6.73□□□□□ -1.33
UBC6YER100W DYS1P38791 387 aa6.73□□□□□ -1.33
UBC6YER100W RAD55P38953 406 aa6.73□□□□□ -1.33
UBC6YER100W TAT2P38967 592 aa6.73□□□□□ -1.33
UBC6YER100W FAA3P39002 694 aa6.73□□□□□ -1.33
UBC6YER100W MRPS18P42847 217 aa6.73□□□□□ -1.33
UBC6YER100W CWC24P53769 259 aa6.73□□□□□ -1.33
UBC6YER100W GYP1Q08484 637 aa6.73□□□□□ -1.33
UBC6YER100W CDC53Q12018 815 aaKnown RBP6.73□□□□□ -1.33
UBC6YER100W IRS4P36115 615 aaKnown RBP6.72□□□□□ -1.33
UBC6YER100W PBP2P38151 413 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
UBC6YER100W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33 RIP-Chip
UBC6YER100W YCS4Q06156 1176 aa6.72□□□□□ -1.33
UBC6YER100W RAS1P01119 309 aa6.71□□□□□ -1.34
UBC6YER100W CDC34P14682 295 aa6.71□□□□□ -1.34
UBC6YER100W POB3Q04636 552 aaKnown RBP6.71□□□□□ -1.34
UBC6YER100W DFG5Q05031 458 aa6.71□□□□□ -1.34
UBC6YER100W KAR2P16474 682 aaKnown RBP6.7□□□□□ -1.34
UBC6YER100W YBR287WP38355 427 aa6.7□□□□□ -1.34
UBC6YER100W DLD3P39976 496 aaKnown RBP6.7□□□□□ -1.34
UBC6YER100W FIR1P40020 876 aa6.7□□□□□ -1.34
UBC6YER100W PSY2P40164 858 aa6.7□□□□□ -1.34
UBC6YER100W RGD2P43556 714 aa6.7□□□□□ -1.34
UBC6YER100W BDP1P46678 594 aa6.7□□□□□ -1.34
UBC6YER100W YGL081WP53156 320 aa6.7□□□□□ -1.34
UBC6YER100W YGR053CP53234 283 aa6.7□□□□□ -1.34
UBC6YER100W PUS5Q06244 254 aa6.7□□□□□ -1.34
UBC6YER100W FLP1P03870 423 aa6.69□□□□□ -1.34
UBC6YER100W MSN1P22148 382 aa6.69□□□□□ -1.34
UBC6YER100W GRX1P25373 110 aaKnown RBP6.69□□□□□ -1.34
UBC6YER100W PRP40P33203 583 aaKnown RBP6.69□□□□□ -1.34
UBC6YER100W MTO1P53070 669 aa6.69□□□□□ -1.34
UBC6YER100W YPL109CQ02981 657 aa6.69□□□□□ -1.34
UBC6YER100W DAL4Q04895 635 aa6.69□□□□□ -1.34
UBC6YER100W INP54Q08227 384 aaKnown RBP6.69□□□□□ -1.34
UBC6YER100W UTP7P40055 554 aaKnown RBP6.68□□□□□ -1.34
UBC6YER100W GDE1Q02979 1223 aa6.68□□□□□ -1.34
UBC6YER100W UTP14Q04500 899 aaKnown RBP6.68□□□□□ -1.34
UBC6YER100W PPM2Q08282 695 aa6.68□□□□□ -1.34
UBC6YER100W TIF6Q12522 245 aaKnown RBP6.68□□□□□ -1.34
UBC6YER100W DUT1P33317 147 aa6.67□□□□□ -1.34
UBC6YER100W YHL008CP38750 627 aa6.67□□□□□ -1.34
UBC6YER100W ATG36P46983 293 aa6.67□□□□□ -1.34
UBC6YER100W FAA4P47912 694 aaKnown RBP6.67□□□□□ -1.34
UBC6YER100W NAN1Q02931 896 aaKnown RBP6.67□□□□□ -1.34
UBC6YER100W Q0182Q9ZZW1 134 aa6.67□□□□□ -1.34
UBC6YER100W TOM20P35180 183 aa6.66□□□□□ -1.34
UBC6YER100W SPF1P39986 1215 aaKnown RBP6.66□□□□□ -1.34
UBC6YER100W QDR2P40474 542 aa6.66□□□□□ -1.34
UBC6YER100W ADI1Q03677 179 aa6.66□□□□□ -1.34
UBC6YER100W UBX5Q06682 500 aa6.66□□□□□ -1.34
UBC6YER100W OPI10Q08202 246 aa6.66□□□□□ -1.34
UBC6YER100W KAP122P32767 1081 aa6.65□□□□□ -1.34
UBC6YER100W ISW1P38144 1129 aa6.65□□□□□ -1.34
UBC6YER100W CHZ1P40019 153 aaPredicted RBP6.65□□□□□ -1.34
UBC6YER100W HUL5P53119 910 aa6.65□□□□□ -1.34
UBC6YER100W YNL165WP53891 406 aa6.65□□□□□ -1.34
UBC6YER100W MSH6Q03834 1242 aa6.65□□□□□ -1.34
UBC6YER100W RTT10Q08924 1013 aa6.65□□□□□ -1.34
UBC6YER100W SDH2P21801 266 aa6.64□□□□□ -1.35
UBC6YER100W MLF3P32047 452 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 103.4 ms