RNA–Protein interactions for RNA: YER022W

SRB4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB4, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB4	YER022W	YNL011C	P53980	444 aa		4.26	□□□□□ -1.73
SRB4	YER022W	GCR2	Q01722	534 aa		4.26	□□□□□ -1.73
SRB4	YER022W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	RIP-Chip
SRB4	YER022W	DLD3	P39976	496 aa	Known RBP	4.25	□□□□□ -1.73
SRB4	YER022W	AAD14	P42884	376 aa		4.25	□□□□□ -1.73
SRB4	YER022W	TY1A-DR3	Q12441	440 aa		4.25	□□□□□ -1.73
SRB4	YER022W	MSN1	P22148	382 aa		4.25	□□□□□ -1.73
SRB4	YER022W	SLA1	P32790	1244 aa		4.25	□□□□□ -1.73
SRB4	YER022W	RTT106	P40161	455 aa		4.25	□□□□□ -1.73
SRB4	YER022W	QDR2	P40474	542 aa		4.25	□□□□□ -1.73
SRB4	YER022W	JJJ2	P46997	583 aa		4.24	□□□□□ -1.73
SRB4	YER022W	MSB3	P48566	633 aa	Predicted RBP	4.24	□□□□□ -1.73
SRB4	YER022W	MSN5	P52918	1224 aa		4.24	□□□□□ -1.73
SRB4	YER022W	JIP5	Q06214	492 aa	Predicted RBP	4.24	□□□□□ -1.73
SRB4	YER022W	CDC4	P07834	779 aa		4.23	□□□□□ -1.73
SRB4	YER022W	RPC31	P17890	251 aa		4.23	□□□□□ -1.73
SRB4	YER022W	AFT1	P22149	690 aa		4.23	□□□□□ -1.73
SRB4	YER022W	VPS35	P34110	944 aa		4.23	□□□□□ -1.73
SRB4	YER022W	YTA7	P40340	1379 aa		4.23	□□□□□ -1.73
SRB4	YER022W	SMC1	P32908	1225 aa		4.23	□□□□□ -1.73
SRB4	YER022W	LDH1	P38139	375 aa		4.23	□□□□□ -1.73
SRB4	YER022W	RPS26A	P39938	119 aa	Known RBP	4.23	□□□□□ -1.73
SRB4	YER022W	RPS26B	P39939	119 aa	Known RBP	4.23	□□□□□ -1.73
SRB4	YER022W	NTA1	P40354	457 aa		4.23	□□□□□ -1.73
SRB4	YER022W	TIF6	Q12522	245 aa	Known RBP	4.23	□□□□□ -1.73
SRB4	YER022W	AIM44	Q99299	758 aa		4.23	□□□□□ -1.73
SRB4	YER022W	HXK1	P04806	485 aa	Known RBP	4.22	□□□□□ -1.73
SRB4	YER022W	GCD6	P32501	712 aa	Known RBP	4.22	□□□□□ -1.73
SRB4	YER022W	BSD2	P38356	321 aa		4.22	□□□□□ -1.73
SRB4	YER022W	COB	P00163	385 aa		4.22	□□□□□ -1.73
SRB4	YER022W	CYC8	P14922	966 aa		4.22	□□□□□ -1.73
SRB4	YER022W	ASH1	P34233	588 aa		4.22	□□□□□ -1.73
SRB4	YER022W	DYS1	P38791	387 aa		4.22	□□□□□ -1.73
SRB4	YER022W	RAD55	P38953	406 aa		4.22	□□□□□ -1.73
SRB4	YER022W	FAA3	P39002	694 aa		4.22	□□□□□ -1.73
SRB4	YER022W	YGR122W	P53272	402 aa		4.22	□□□□□ -1.73
SRB4	YER022W	ALD3	P54114	506 aa		4.22	□□□□□ -1.73
SRB4	YER022W	CTR9	P89105	1077 aa		4.22	□□□□□ -1.73
SRB4	YER022W	VPS16	Q03308	798 aa		4.22	□□□□□ -1.73
SRB4	YER022W	PSH1	Q12161	406 aa		4.22	□□□□□ -1.73
SRB4	YER022W	UGA3	P26370	528 aa		4.21	□□□□□ -1.74
SRB4	YER022W	KAP122	P32767	1081 aa		4.21	□□□□□ -1.74
SRB4	YER022W	ALA1	P40825	983 aa	Known RBP	4.21	□□□□□ -1.74
SRB4	YER022W	SAM37	P50110	327 aa		4.21	□□□□□ -1.74
SRB4	YER022W	BSC2	Q05611	235 aa		4.21	□□□□□ -1.74
SRB4	YER022W	PIN2	Q12057	282 aa		4.21	□□□□□ -1.74
SRB4	YER022W	PDC6	P26263	563 aa	Known RBP	4.2	□□□□□ -1.74
SRB4	YER022W	IRE1	P32361	1115 aa		4.2	□□□□□ -1.74
SRB4	YER022W	DLD1	P32891	587 aa		4.2	□□□□□ -1.74
SRB4	YER022W	IRS4	P36115	615 aa	Known RBP	4.2	□□□□□ -1.74
SRB4	YER022W	PSY2	P40164	858 aa		4.2	□□□□□ -1.74
SRB4	YER022W	NOC3	Q07896	663 aa	Predicted RBP	4.2	□□□□□ -1.74
SRB4	YER022W	ARG82	P07250	355 aa		4.2	□□□□□ -1.74
SRB4	YER022W	LEU1	P07264	779 aa	Known RBP	4.2	□□□□□ -1.74
SRB4	YER022W	DAL1	P32375	460 aa		4.2	□□□□□ -1.74
SRB4	YER022W	DUR3	P33413	735 aa		4.2	□□□□□ -1.74
SRB4	YER022W	PTK2	P47116	818 aa	Known RBP	4.2	□□□□□ -1.74
SRB4	YER022W	RMD1	Q03441	430 aa		4.2	□□□□□ -1.74
SRB4	YER022W	VTC4	P47075	721 aa		4.19	□□□□□ -1.74
SRB4	YER022W	ALD6	P54115	500 aa	Known RBP	4.19	□□□□□ -1.74
SRB4	YER022W	INP54	Q08227	384 aa	Known RBP	4.19	□□□□□ -1.74
SRB4	YER022W	YOR296W	Q08748	1289 aa		4.19	□□□□□ -1.74
SRB4	YER022W	FLP1	P03870	423 aa		4.18	□□□□□ -1.74
SRB4	YER022W	RAD2	P07276	1031 aa		4.18	□□□□□ -1.74
SRB4	YER022W	UGA4	P32837	571 aa		4.18	□□□□□ -1.74
SRB4	YER022W	VAC8	P39968	578 aa		4.18	□□□□□ -1.74
SRB4	YER022W	YJR098C	P47139	656 aa		4.18	□□□□□ -1.74
SRB4	YER022W	YJR115W	P47152	169 aa		4.18	□□□□□ -1.74
SRB4	YER022W	EMG1	Q06287	252 aa	Known RBP	4.18	□□□□□ -1.74
SRB4	YER022W	GIP1	P38229	639 aa		4.18	□□□□□ -1.74
SRB4	YER022W	CIC1	P38779	376 aa	Known RBP	4.18	□□□□□ -1.74
SRB4	YER022W	NNF1	P47149	201 aa		4.18	□□□□□ -1.74
SRB4	YER022W	SKP1	P52286	194 aa		4.18	□□□□□ -1.74
SRB4	YER022W	MTO1	P53070	669 aa		4.18	□□□□□ -1.74
SRB4	YER022W	ESF1	Q06344	628 aa	Known RBP	4.18	□□□□□ -1.74
SRB4	YER022W	ISW1	P38144	1129 aa		4.17	□□□□□ -1.74
SRB4	YER022W	ITC1	P53125	1264 aa		4.17	□□□□□ -1.74
SRB4	YER022W	CUS1	Q02554	436 aa	Predicted RBP	4.17	□□□□□ -1.74
SRB4	YER022W	PRP40	P33203	583 aa	Known RBP	4.17	□□□□□ -1.74
SRB4	YER022W	HST3	P53687	447 aa		4.17	□□□□□ -1.74
SRB4	YER022W	DAL4	Q04895	635 aa		4.17	□□□□□ -1.74
SRB4	YER022W	SSF2	Q12153	453 aa	Predicted RBP	4.17	□□□□□ -1.74
SRB4	YER022W	DUT1	P33317	147 aa		4.16	□□□□□ -1.74
SRB4	YER022W	AHP1	P38013	176 aa	Known RBP	4.16	□□□□□ -1.74
SRB4	YER022W	FIR1	P40020	876 aa		4.16	□□□□□ -1.74
SRB4	YER022W	YNR040W	P53736	256 aa		4.16	□□□□□ -1.74
SRB4	YER022W	YPL109C	Q02981	657 aa		4.16	□□□□□ -1.74
SRB4	YER022W	YCS4	Q06156	1176 aa		4.16	□□□□□ -1.74
SRB4	YER022W	PEP7	P32609	515 aa		4.15	□□□□□ -1.74
SRB4	YER022W	PIC2	P40035	300 aa		4.15	□□□□□ -1.74
SRB4	YER022W	YTA6	P40328	754 aa		4.15	□□□□□ -1.74
SRB4	YER022W	YIL165C	P40446	119 aa		4.15	□□□□□ -1.74
SRB4	YER022W	IOC3	P43596	787 aa		4.15	□□□□□ -1.74
SRB4	YER022W	NUP85	P46673	744 aa		4.15	□□□□□ -1.74
SRB4	YER022W	OXR1	Q08952	273 aa		4.15	□□□□□ -1.74
SRB4	YER022W	PRE9	P23638	258 aa	Known RBP	4.15	□□□□□ -1.75
SRB4	YER022W	MCM5	P29496	775 aa	Known RBP	4.15	□□□□□ -1.75
SRB4	YER022W	YHL008C	P38750	627 aa		4.15	□□□□□ -1.75
SRB4	YER022W	TAT2	P38967	592 aa		4.15	□□□□□ -1.75
SRB4	YER022W	MSH6	Q03834	1242 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms