RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	HXK1	P04806	485 aa	Known RBP	4.16	□□□□□ -1.74
SMT3	YDR510W	SWI5	P08153	709 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	SEC2	P17065	759 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	FAA3	P39002	694 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	YEN1	P40028	759 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	FAA4	P47912	694 aa	Known RBP	4.16	□□□□□ -1.74
SMT3	YDR510W	YNL011C	P53980	444 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	GDE1	Q02979	1223 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	TDA5	Q06417	326 aa	Known RBP	4.16	□□□□□ -1.74
SMT3	YDR510W	ATG20	Q07528	640 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	GIN4	Q12263	1142 aa		4.16	□□□□□ -1.74
SMT3	YDR510W	PHO8	P11491	566 aa		4.15	□□□□□ -1.75
SMT3	YDR510W	PRI2	P20457	528 aa		4.15	□□□□□ -1.75
SMT3	YDR510W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SMT3	YDR510W	NOC3	Q07896	663 aa	Predicted RBP	4.15	□□□□□ -1.75
SMT3	YDR510W	YLR125W	Q12138	136 aa		4.15	□□□□□ -1.75
SMT3	YDR510W	CDC34	P14682	295 aa		4.14	□□□□□ -1.75
SMT3	YDR510W	GRX7	P38068	203 aa		4.14	□□□□□ -1.75
SMT3	YDR510W	YHL008C	P38750	627 aa		4.14	□□□□□ -1.75
SMT3	YDR510W	SPF1	P39986	1215 aa	Known RBP	4.14	□□□□□ -1.75
SMT3	YDR510W	CHZ1	P40019	153 aa	Predicted RBP	4.14	□□□□□ -1.75
SMT3	YDR510W	HXT10	P43581	546 aa		4.14	□□□□□ -1.75
SMT3	YDR510W	WSC3	Q12215	556 aa		4.14	□□□□□ -1.75
SMT3	YDR510W	SRM1	P21827	482 aa		4.13	□□□□□ -1.75
SMT3	YDR510W	YHR020W	P38708	688 aa	Known RBP	4.13	□□□□□ -1.75
SMT3	YDR510W	CRP1	P38845	465 aa	Known RBP	4.13	□□□□□ -1.75
SMT3	YDR510W	RRD1	P40454	393 aa	Known RBP	4.13	□□□□□ -1.75
SMT3	YDR510W	ZDS1	P50111	915 aa	Known RBP	4.13	□□□□□ -1.75
SMT3	YDR510W	MCD1	Q12158	566 aa		4.13	□□□□□ -1.75
SMT3	YDR510W	MRPL33	P20084	86 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	PRE9	P23638	258 aa	Known RBP	4.12	□□□□□ -1.75
SMT3	YDR510W	TPD3	P31383	635 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	THI4	P32318	326 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	UTR2	P32623	467 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	SEC6	P32844	805 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	SMC1	P32908	1225 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	ENP1	P38333	483 aa	Known RBP	4.12	□□□□□ -1.75
SMT3	YDR510W	MRPS18	P42847	217 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	TYW3	P53177	273 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	RSC4	Q02206	625 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	ELP4	Q02884	456 aa	Known RBP	4.12	□□□□□ -1.75
SMT3	YDR510W	BSC2	Q05611	235 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	OPI10	Q08202	246 aa		4.12	□□□□□ -1.75
SMT3	YDR510W	NOP14	Q99207	810 aa	Known RBP	4.12	□□□□□ -1.75
SMT3	YDR510W	KIP2	P28743	706 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	DUT1	P33317	147 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	YKL069W	P36088	180 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	HXT5	P38695	592 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	RRN7	P40992	514 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	YGR053C	P53234	283 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	DNM1	P54861	757 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	DAL4	Q04895	635 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	BUD20	Q08004	166 aa	Predicted RBP	4.11	□□□□□ -1.75
SMT3	YDR510W	FLC1	Q08967	793 aa		4.11	□□□□□ -1.75
SMT3	YDR510W	FAL1	Q12099	399 aa	Known RBP	4.11	□□□□□ -1.75
SMT3	YDR510W	CCP1	P00431	361 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	ERR1	P0CX10	437 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	ERR2	P0CX11	437 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	GAL11	P19659	1081 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	MRC1	P25588	1096 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	PRP40	P33203	583 aa	Known RBP	4.1	□□□□□ -1.75
SMT3	YDR510W	PAF1	P38351	445 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	RSP5	P39940	809 aa	Known RBP	4.1	□□□□□ -1.75
SMT3	YDR510W	ECM16	Q04217	1267 aa	Known RBP	4.1	□□□□□ -1.75
SMT3	YDR510W	YDL121C	Q07541	149 aa		4.1	□□□□□ -1.75
SMT3	YDR510W	INP54	Q08227	384 aa	Known RBP	4.1	□□□□□ -1.75
SMT3	YDR510W	MCM1	P11746	286 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	KAR1	P11927	433 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	VMA3	P25515	160 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	SCD5	P34758	872 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	TBS1	P38114	1094 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	HXT8	P40886	569 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	ITC1	P53125	1264 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	HAP5	Q02516	242 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	YPL109C	Q02981	657 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	ADR1	P07248	1323 aa		4.09	□□□□□ -1.75
SMT3	YDR510W	DAT1	P13483	248 aa	Known RBP	4.08	□□□□□ -1.76
SMT3	YDR510W	PAT1	P25644	796 aa	Known RBP	4.08	□□□□□ -1.76
SMT3	YDR510W	RAD55	P38953	406 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	ULI1	P43604	169 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	YJR115W	P47152	169 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	YGR125W	P53273	1036 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	YNR029C	P53729	429 aa	Known RBP	4.08	□□□□□ -1.76
SMT3	YDR510W	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	MDG1	P53885	366 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	YNL035C	P53962	389 aa	Known RBP	4.08	□□□□□ -1.76
SMT3	YDR510W	ISU1	Q03020	165 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	YCS4	Q06156	1176 aa		4.08	□□□□□ -1.76
SMT3	YDR510W	PRT1	P06103	763 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	PWP2	P25635	923 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	RAD27	P26793	382 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	MCM5	P29496	775 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	UGA4	P32837	571 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	VPS24	P36095	224 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	FUI1	P38196	639 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	GGA2	P38817	585 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	EMW1	P42842	904 aa	Known RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	PEX8	P53248	589 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	APP1	P53933	587 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 96.4 ms