RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C GLN1P32288 370 aaKnown RBP6.89□□□□□ -1.31
SEC20YDR498C CTH1P47976 325 aa6.89□□□□□ -1.31
SEC20YDR498C LYS4P49367 693 aaPredicted RBP6.89□□□□□ -1.31
SEC20YDR498C JIP4Q03361 876 aa6.89□□□□□ -1.31
SEC20YDR498C RMD1Q03441 430 aa6.89□□□□□ -1.31
SEC20YDR498C PSH1Q12161 406 aa6.89□□□□□ -1.31
SEC20YDR498C TRL1P09880 827 aaKnown RBP6.88□□□□□ -1.31
SEC20YDR498C PTC4P38089 393 aa6.88□□□□□ -1.31
SEC20YDR498C YGL242CP53066 181 aa6.88□□□□□ -1.31
SEC20YDR498C LAM6Q08001 693 aa6.88□□□□□ -1.31
SEC20YDR498C SAC3P46674 1301 aa6.87□□□□□ -1.31
SEC20YDR498C SER1P33330 395 aaKnown RBP6.87□□□□□ -1.31
SEC20YDR498C AAP1P37898 856 aaKnown RBP6.87□□□□□ -1.31
SEC20YDR498C DJP1P40564 432 aa6.87□□□□□ -1.31
SEC20YDR498C VPS70P47161 811 aa6.87□□□□□ -1.31
SEC20YDR498C MDG1P53885 366 aa6.87□□□□□ -1.31
SEC20YDR498C MTC5Q03897 1148 aa6.87□□□□□ -1.31
SEC20YDR498C RPN7Q06103 429 aaKnown RBP6.87□□□□□ -1.31
SEC20YDR498C AIR2Q12476 344 aaKnown RBP6.87□□□□□ -1.31
SEC20YDR498C PDR18P53756 1333 aa6.86□□□□□ -1.31
SEC20YDR498C PRP40P33203 583 aaKnown RBP6.86□□□□□ -1.31
SEC20YDR498C SOL3P38858 249 aa6.86□□□□□ -1.31
SEC20YDR498C PKH1Q03407 766 aa6.86□□□□□ -1.31
SEC20YDR498C NCR1Q12200 1170 aa6.86□□□□□ -1.31
SEC20YDR498C ADR1P07248 1323 aa6.85□□□□□ -1.31
SEC20YDR498C SEC18P18759 758 aaKnown RBP6.85□□□□□ -1.31
SEC20YDR498C SEC61P32915 480 aa6.85□□□□□ -1.31
SEC20YDR498C SSF1P38789 453 aaPredicted RBP6.85□□□□□ -1.31
SEC20YDR498C NPA3P47122 385 aa6.85□□□□□ -1.31
SEC20YDR498C YNL193WP53870 558 aa6.85□□□□□ -1.31
SEC20YDR498C RIM20Q12033 661 aa6.85□□□□□ -1.31
SEC20YDR498C AIM9P40053 627 aaKnown RBP6.84□□□□□ -1.31
SEC20YDR498C TFG1P41895 735 aaPredicted RBP6.84□□□□□ -1.31
SEC20YDR498C YJL171CP46992 396 aa6.84□□□□□ -1.31
SEC20YDR498C DAN4P47179 1161 aa6.84□□□□□ -1.31
SEC20YDR498C MLC1P53141 149 aa6.84□□□□□ -1.31
SEC20YDR498C YGR273CP53329 174 aa6.84□□□□□ -1.31
SEC20YDR498C YPR148CQ06523 435 aa6.84□□□□□ -1.31
SEC20YDR498C RIX7Q07844 837 aaKnown RBP6.84□□□□□ -1.31
SEC20YDR498C VAS1P07806 1104 aaKnown RBP6.83□□□□□ -1.32
SEC20YDR498C MYO1P08964 1928 aa6.82□□□□□ -1.32
SEC20YDR498C SRS2P12954 1174 aa6.82□□□□□ -1.32
SEC20YDR498C ROX1P25042 368 aa6.82□□□□□ -1.32
SEC20YDR498C TOS1P38288 455 aa6.82□□□□□ -1.32
SEC20YDR498C HAL5P38970 855 aaKnown RBP6.82□□□□□ -1.32
SEC20YDR498C CTI6Q08923 506 aa6.82□□□□□ -1.32
SEC20YDR498C NCB2Q92317 146 aa6.82□□□□□ -1.32
SEC20YDR498C LAM4P38800 1345 aa6.81□□□□□ -1.32
SEC20YDR498C GLO3P38682 493 aaKnown RBP6.81□□□□□ -1.32
SEC20YDR498C SNF7P39929 240 aaKnown RBP6.81□□□□□ -1.32
SEC20YDR498C VPS20Q04272 221 aa6.81□□□□□ -1.32
SEC20YDR498C BRE1Q07457 700 aaKnown RBP6.81□□□□□ -1.32
SEC20YDR498C HAT1Q12341 374 aa6.81□□□□□ -1.32
SEC20YDR498C FLO1P32768 1537 aa6.81□□□□□ -1.32
SEC20YDR498C POM152P39685 1337 aa6.8□□□□□ -1.32
SEC20YDR498C KTR1P27810 393 aaKnown RBP6.8□□□□□ -1.32
SEC20YDR498C YJL181WP46987 611 aa6.8□□□□□ -1.32
SEC20YDR498C BUG1Q12191 341 aa6.8□□□□□ -1.32
SEC20YDR498C LSP1Q12230 341 aaKnown RBP6.8□□□□□ -1.32
SEC20YDR498C PGA3Q12746 312 aaKnown RBP6.8□□□□□ -1.32
SEC20YDR498C MPH3P0CE00 602 aa6.79□□□□□ -1.32
SEC20YDR498C MSP1P28737 362 aa6.79□□□□□ -1.32
SEC20YDR498C SPL2P38839 148 aa6.79□□□□□ -1.32
SEC20YDR498C VHR2P40041 505 aa6.79□□□□□ -1.32
SEC20YDR498C CWH41P53008 833 aa6.79□□□□□ -1.32
SEC20YDR498C PKH3Q03306 898 aaPredicted RBP6.79□□□□□ -1.32
SEC20YDR498C AI4P03878 556 aa6.78□□□□□ -1.32
SEC20YDR498C CAF20P12962 161 aaKnown RBP6.78□□□□□ -1.32
SEC20YDR498C NGR1P32831 672 aaKnown RBP6.78□□□□□ -1.32
SEC20YDR498C VPS24P36095 224 aaKnown RBP6.78□□□□□ -1.32
SEC20YDR498C YMR147WP40218 223 aaKnown RBP6.78□□□□□ -1.32
SEC20YDR498C ECM23Q02710 187 aa6.78□□□□□ -1.32
SEC20YDR498C THI3Q07471 609 aa6.78□□□□□ -1.32
SEC20YDR498C SNU66Q12420 587 aaPredicted RBP6.78□□□□□ -1.32
SEC20YDR498C RNR2P09938 399 aaKnown RBP6.77□□□□□ -1.33
SEC20YDR498C CLC1P17891 233 aa6.77□□□□□ -1.33
SEC20YDR498C MBR1P23493 339 aa6.77□□□□□ -1.33
SEC20YDR498C MGM1P32266 881 aa6.77□□□□□ -1.33
SEC20YDR498C SLN1P39928 1220 aaPredicted RBP6.77□□□□□ -1.33
SEC20YDR498C ICP55P40051 511 aa6.77□□□□□ -1.33
SEC20YDR498C UTP22P53254 1237 aaPredicted RBP6.77□□□□□ -1.33
SEC20YDR498C RAT1Q02792 1006 aaKnown RBP6.77□□□□□ -1.33
SEC20YDR498C PML39Q03760 334 aa6.77□□□□□ -1.33
SEC20YDR498C KAR5Q04746 504 aa6.77□□□□□ -1.33
SEC20YDR498C FPR4Q06205 392 aaPredicted RBP6.77□□□□□ -1.33
SEC20YDR498C BMT6Q12291 365 aa6.77□□□□□ -1.33
SEC20YDR498C KNS1P32350 737 aaPredicted RBP6.76□□□□□ -1.33
SEC20YDR498C SAP30P38429 201 aa6.76□□□□□ -1.33
SEC20YDR498C HRQ1Q05549 1077 aa6.76□□□□□ -1.33
SEC20YDR498C YDL129WQ07555 291 aa6.76□□□□□ -1.33
SEC20YDR498C KEX1P09620 729 aa6.75□□□□□ -1.33
SEC20YDR498C UBP1P25037 809 aa6.75□□□□□ -1.33
SEC20YDR498C GRX7P38068 203 aa6.75□□□□□ -1.33
SEC20YDR498C PBY1P38254 753 aa6.75□□□□□ -1.33
SEC20YDR498C CIC1P38779 376 aaKnown RBP6.75□□□□□ -1.33
SEC20YDR498C REF2P42073 533 aaPredicted RBP6.75□□□□□ -1.33
SEC20YDR498C CIR1P42940 261 aa6.75□□□□□ -1.33
SEC20YDR498C EAF7P53911 425 aaKnown RBP6.75□□□□□ -1.33
SEC20YDR498C YBL086CP38177 466 aa6.74□□□□□ -1.33
SEC20YDR498C UBP14P38237 781 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms