RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W NOP7P53261 605 aaKnown RBP4.74□□□□□ -1.65
TRS85YDR108W RCF1Q03713 159 aa4.74□□□□□ -1.65
TRS85YDR108W POL1P13382 1468 aa4.74□□□□□ -1.65
TRS85YDR108W RAD50P12753 1312 aa4.74□□□□□ -1.65
TRS85YDR108W NUP159P40477 1460 aa4.74□□□□□ -1.65
TRS85YDR108W KEX2P13134 814 aa4.74□□□□□ -1.65
TRS85YDR108W PDI1P17967 522 aaKnown RBP4.74□□□□□ -1.65
TRS85YDR108W PBY1P38254 753 aa4.74□□□□□ -1.65
TRS85YDR108W LAM1P38851 1228 aa4.74□□□□□ -1.65
TRS85YDR108W JJJ1P53863 590 aa4.74□□□□□ -1.65
TRS85YDR108W YPR109WQ06104 294 aa4.74□□□□□ -1.65
TRS85YDR108W BRF1P29056 596 aa4.73□□□□□ -1.65
TRS85YDR108W MPH1P40562 993 aa4.73□□□□□ -1.65
TRS85YDR108W FRK1Q03002 865 aaPredicted RBP4.73□□□□□ -1.65
TRS85YDR108W YMR196WQ04336 1088 aa4.73□□□□□ -1.65
TRS85YDR108W TLG2Q08144 397 aa4.73□□□□□ -1.65
TRS85YDR108W SRS2P12954 1174 aa4.73□□□□□ -1.65
TRS85YDR108W RAD16P31244 790 aa4.73□□□□□ -1.65
TRS85YDR108W BRN1P38170 754 aa4.73□□□□□ -1.65
TRS85YDR108W RFC1P38630 861 aaKnown RBP4.73□□□□□ -1.65
TRS85YDR108W ARO80Q04052 950 aa4.73□□□□□ -1.65
TRS85YDR108W UBX2Q04228 584 aa4.73□□□□□ -1.65
TRS85YDR108W ERF2Q06551 359 aa4.73□□□□□ -1.65
TRS85YDR108W YKL068W-AQ3E826 78 aa4.73□□□□□ -1.65
TRS85YDR108W YCF1P39109 1515 aaKnown RBP4.72□□□□□ -1.65
TRS85YDR108W RPN12P32496 274 aa4.72□□□□□ -1.65
TRS85YDR108W MFT1P33441 392 aaKnown RBP4.72□□□□□ -1.65
TRS85YDR108W EXO84P38261 753 aa4.72□□□□□ -1.65
TRS85YDR108W MTR4P47047 1073 aaKnown RBP4.72□□□□□ -1.65
TRS85YDR108W SPO19Q03029 223 aa4.72□□□□□ -1.65
TRS85YDR108W PSR1Q07800 427 aa4.72□□□□□ -1.65
TRS85YDR108W YPL225WQ08971 146 aaKnown RBP4.72□□□□□ -1.65
TRS85YDR108W MRC1P25588 1096 aa4.71□□□□□ -1.65
TRS85YDR108W BRL1P38770 471 aa4.71□□□□□ -1.65
TRS85YDR108W BEM4P39011 633 aa4.71□□□□□ -1.65
TRS85YDR108W SEC26P41810 973 aaKnown RBP4.71□□□□□ -1.65
TRS85YDR108W PRP31P49704 494 aaPredicted RBP4.71□□□□□ -1.65
TRS85YDR108W INP52P50942 1183 aa4.71□□□□□ -1.65
TRS85YDR108W HUL5P53119 910 aa4.71□□□□□ -1.65
TRS85YDR108W RRB1Q04225 511 aaKnown RBP4.71□□□□□ -1.65
TRS85YDR108W ROM2P51862 1356 aaKnown RBP4.71□□□□□ -1.66
TRS85YDR108W MET5P47169 1442 aa4.71□□□□□ -1.66
TRS85YDR108W PDR5P33302 1511 aaKnown RBP4.71□□□□□ -1.66
TRS85YDR108W TAF13P11747 167 aa4.71□□□□□ -1.66
TRS85YDR108W HSP104P31539 908 aaKnown RBP4.71□□□□□ -1.66
TRS85YDR108W CDC3P32457 520 aaKnown RBP4.71□□□□□ -1.66
TRS85YDR108W TIM50Q02776 476 aa4.71□□□□□ -1.66
TRS85YDR108W VMS1Q04311 632 aaKnown RBP4.71□□□□□ -1.66
TRS85YDR108W YDL144CQ07589 356 aa4.71□□□□□ -1.66
TRS85YDR108W SWI6P09959 803 aa4.7□□□□□ -1.66
TRS85YDR108W SUI2P20459 304 aaKnown RBP4.7□□□□□ -1.66
TRS85YDR108W RPL5P26321 297 aaKnown RBP4.7□□□□□ -1.66
TRS85YDR108W YME2P32843 850 aa4.7□□□□□ -1.66
TRS85YDR108W SLD2P34252 453 aa4.7□□□□□ -1.66
TRS85YDR108W NPR3P38742 1146 aa4.7□□□□□ -1.66
TRS85YDR108W RVS167P39743 482 aaKnown RBP4.7□□□□□ -1.66
TRS85YDR108W YRB1P41920 201 aaKnown RBP4.7□□□□□ -1.66
TRS85YDR108W CIR1P42940 261 aa4.7□□□□□ -1.66
TRS85YDR108W HOT1Q03213 719 aa4.7□□□□□ -1.66
TRS85YDR108W NKP1Q12493 238 aa4.7□□□□□ -1.66
TRS85YDR108W DAL5P15365 543 aa4.69□□□□□ -1.66
TRS85YDR108W THR4P16120 514 aaKnown RBP4.69□□□□□ -1.66
TRS85YDR108W MRPS28P21771 286 aa4.69□□□□□ -1.66
TRS85YDR108W MNR2P35724 969 aa4.69□□□□□ -1.66
TRS85YDR108W SPR3P41901 512 aa4.69□□□□□ -1.66
TRS85YDR108W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
TRS85YDR108W GYL1Q04322 720 aa4.69□□□□□ -1.66
TRS85YDR108W CDC4P07834 779 aa4.69□□□□□ -1.66
TRS85YDR108W RRT14P40470 206 aa4.69□□□□□ -1.66
TRS85YDR108W SHE4P51534 789 aa4.69□□□□□ -1.66
TRS85YDR108W IST1P53843 298 aaPredicted RBP4.69□□□□□ -1.66
TRS85YDR108W TIM11P81449 96 aaPredicted RBP4.69□□□□□ -1.66
TRS85YDR108W AOS1Q06624 347 aa4.69□□□□□ -1.66
TRS85YDR108W KIN1P13185 1064 aa4.68□□□□□ -1.66
TRS85YDR108W TIF3P34167 436 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W ATG36P46983 293 aa4.68□□□□□ -1.66
TRS85YDR108W YGL081WP53156 320 aa4.68□□□□□ -1.66
TRS85YDR108W STE20Q03497 939 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W LSO1Q3E827 93 aa4.68□□□□□ -1.66
TRS85YDR108W CDC37P06101 506 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W GAR1P28007 205 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W PAC1P39946 494 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W RSM25P40496 264 aa4.68□□□□□ -1.66
TRS85YDR108W SUM1P46676 1062 aa4.68□□□□□ -1.66
TRS85YDR108W CCM1P48237 864 aaPredicted RBP4.68□□□□□ -1.66
TRS85YDR108W YGL082WP53155 381 aa4.68□□□□□ -1.66
TRS85YDR108W KRE33P53914 1056 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W GCR2Q01722 534 aa4.68□□□□□ -1.66
TRS85YDR108W UTP4Q06679 776 aaKnown RBP4.68□□□□□ -1.66
TRS85YDR108W KOG1P38873 1557 aa4.68□□□□□ -1.66
TRS85YDR108W SSK2P53599 1579 aa4.68□□□□□ -1.66
TRS85YDR108W PET123P17558 318 aa4.67□□□□□ -1.66
TRS85YDR108W EFB1P32471 206 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W ELM1P32801 640 aa4.67□□□□□ -1.66
TRS85YDR108W RRP1P35178 278 aaPredicted RBP4.67□□□□□ -1.66
TRS85YDR108W MPE1P35728 441 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W MRPL10P36520 322 aa4.67□□□□□ -1.66
TRS85YDR108W GEF1P37020 779 aa4.67□□□□□ -1.66
TRS85YDR108W BDH2P39713 417 aa4.67□□□□□ -1.66
TRS85YDR108W ALD2P47771 506 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms