RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C QDR2P40474 542 aa5.72□□□□□ -1.49
ASM4YDL088C CUS1Q02554 436 aaPredicted RBP5.72□□□□□ -1.49
ASM4YDL088C PUN1Q06991 263 aa5.7□□□□□ -1.5
ASM4YDL088C SUV3P32580 737 aa5.69□□□□□ -1.5
ASM4YDL088C SKP1P52286 194 aa5.69□□□□□ -1.5
ASM4YDL088C CAB1Q04430 367 aa5.69□□□□□ -1.5
ASM4YDL088C MCX1P38323 520 aaPredicted RBP5.68□□□□□ -1.5
ASM4YDL088C APM2P38700 605 aa5.68□□□□□ -1.5
ASM4YDL088C PUF6Q04373 656 aaKnown RBP5.68□□□□□ -1.5
ASM4YDL088C ALD4P46367 519 aaKnown RBP5.67□□□□□ -1.5
ASM4YDL088C MRPL33P20084 86 aa5.67□□□□□ -1.5
ASM4YDL088C VMA3P25515 160 aa5.67□□□□□ -1.5
ASM4YDL088C DYS1P38791 387 aa5.67□□□□□ -1.5
ASM4YDL088C PRK1P40494 810 aa5.67□□□□□ -1.5
ASM4YDL088C YML083CQ04526 418 aa5.67□□□□□ -1.5
ASM4YDL088C RPC31P17890 251 aa5.66□□□□□ -1.5
ASM4YDL088C ALG14P38242 237 aa5.66□□□□□ -1.5
ASM4YDL088C YBR197CP38306 217 aa5.66□□□□□ -1.5
ASM4YDL088C CCT8P47079 568 aaKnown RBP5.66□□□□□ -1.5
ASM4YDL088C YNR040WP53736 256 aa5.66□□□□□ -1.5
ASM4YDL088C ISC10P32645 267 aa5.65□□□□□ -1.5
ASM4YDL088C LDH1P38139 375 aa5.65□□□□□ -1.5
ASM4YDL088C SKN7P38889 622 aa5.65□□□□□ -1.5
ASM4YDL088C PGM2P37012 569 aaKnown RBP5.64□□□□□ -1.51
ASM4YDL088C NOB1Q08444 459 aaKnown RBP5.64□□□□□ -1.51
ASM4YDL088C NHA1Q99271 985 aa5.64□□□□□ -1.51
ASM4YDL088C SBP1P10080 294 aaKnown RBP5.63□□□□□ -1.51
ASM4YDL088C SRS2P12954 1174 aa5.63□□□□□ -1.51
ASM4YDL088C TAT1P38085 619 aa5.63□□□□□ -1.51
ASM4YDL088C YOR296WQ08748 1289 aa5.63□□□□□ -1.51
ASM4YDL088C YDR215CQ12240 137 aa5.63□□□□□ -1.51
ASM4YDL088C RLF2Q12495 606 aa5.63□□□□□ -1.51
ASM4YDL088C YCK2P23292 546 aaKnown RBP5.62□□□□□ -1.51
ASM4YDL088C SLN1P39928 1220 aaPredicted RBP5.62□□□□□ -1.51
ASM4YDL088C NAB2P32505 525 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51 RIP-Chip
ASM4YDL088C GIP1P38229 639 aa5.61□□□□□ -1.51
ASM4YDL088C ITC1P53125 1264 aa5.61□□□□□ -1.51
ASM4YDL088C RRN6P32786 894 aa5.6□□□□□ -1.51
ASM4YDL088C BSD2P38356 321 aa5.6□□□□□ -1.51
ASM4YDL088C PRY1P47032 299 aa5.6□□□□□ -1.51
ASM4YDL088C NAR1P23503 491 aaKnown RBP5.59□□□□□ -1.51
ASM4YDL088C ISW1P38144 1129 aa5.59□□□□□ -1.51
ASM4YDL088C TPS3P38426 1054 aaKnown RBP5.59□□□□□ -1.51
ASM4YDL088C CWC15Q03772 175 aaKnown RBP5.59□□□□□ -1.51
ASM4YDL088C GIS4Q04233 774 aa5.59□□□□□ -1.51
ASM4YDL088C PNP1Q05788 311 aa5.59□□□□□ -1.51
ASM4YDL088C IDI1P15496 288 aa5.59□□□□□ -1.52
ASM4YDL088C FIR1P40020 876 aa5.59□□□□□ -1.52
ASM4YDL088C MCA1Q08601 432 aa5.59□□□□□ -1.52
ASM4YDL088C YBR287WP38355 427 aa5.58□□□□□ -1.52
ASM4YDL088C RSC2Q06488 889 aa5.58□□□□□ -1.52
ASM4YDL088C YER156CP40093 338 aaKnown RBP5.57□□□□□ -1.52
ASM4YDL088C LSB6P42951 607 aa5.57□□□□□ -1.52
ASM4YDL088C MRP10O75012 95 aa5.56□□□□□ -1.52
ASM4YDL088C MSN1P22148 382 aa5.56□□□□□ -1.52
ASM4YDL088C YJL181WP46987 611 aa5.56□□□□□ -1.52
ASM4YDL088C SUT1P53032 299 aaKnown RBP5.56□□□□□ -1.52
ASM4YDL088C SUB2Q07478 446 aaKnown RBP5.56□□□□□ -1.52
ASM4YDL088C HXT8P40886 569 aa5.55□□□□□ -1.52
ASM4YDL088C FUR4P05316 633 aaKnown RBP5.55□□□□□ -1.52
ASM4YDL088C AMN1P38285 549 aaPredicted RBP5.55□□□□□ -1.52
ASM4YDL088C RRM3P38766 723 aa5.55□□□□□ -1.52
ASM4YDL088C PPT1P53043 513 aa5.54□□□□□ -1.52
ASM4YDL088C BUD9P53226 547 aa5.54□□□□□ -1.52
ASM4YDL088C RPL34AP87262 121 aaPredicted RBP5.54□□□□□ -1.52
ASM4YDL088C YIL165CP40446 119 aa5.53□□□□□ -1.52
ASM4YDL088C YPL034WQ03083 165 aa5.52□□□□□ -1.53
ASM4YDL088C GAS5Q08193 484 aa5.52□□□□□ -1.53
ASM4YDL088C SLP1Q12232 587 aa5.52□□□□□ -1.53
ASM4YDL088C AIM46P38885 310 aa5.51□□□□□ -1.53
ASM4YDL088C SOK2P53438 785 aaPredicted RBP5.51□□□□□ -1.53
ASM4YDL088C GIP2P40036 548 aa5.5□□□□□ -1.53
ASM4YDL088C TED1P40533 473 aa5.5□□□□□ -1.53
ASM4YDL088C EMG1Q06287 252 aaKnown RBP5.5□□□□□ -1.53
ASM4YDL088C BOI1P38041 980 aaKnown RBP5.5□□□□□ -1.53
ASM4YDL088C AI3P03877 415 aa5.49□□□□□ -1.53
ASM4YDL088C SAC7P17121 654 aa5.49□□□□□ -1.53
ASM4YDL088C RPB10P22139 70 aa5.49□□□□□ -1.53
ASM4YDL088C RAD55P38953 406 aa5.49□□□□□ -1.53
ASM4YDL088C NRD1P53617 575 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
ASM4YDL088C LSO1Q3E827 93 aa5.49□□□□□ -1.53
ASM4YDL088C SMC1P32908 1225 aa5.48□□□□□ -1.53
ASM4YDL088C APC11Q12157 165 aa5.48□□□□□ -1.53
ASM4YDL088C TY4B-PA0A0B7P3V8 1104 aa5.47□□□□□ -1.53
ASM4YDL088C SFA1P32771 386 aa5.47□□□□□ -1.53
ASM4YDL088C BOL3P39724 118 aa5.47□□□□□ -1.53
ASM4YDL088C INP51P40559 946 aaKnown RBP5.47□□□□□ -1.53
ASM4YDL088C RGD2P43556 714 aa5.47□□□□□ -1.53
ASM4YDL088C KAR5Q04746 504 aa5.47□□□□□ -1.53
ASM4YDL088C TY4A-HQ6Q5P6 413 aa5.47□□□□□ -1.53
ASM4YDL088C NTA1P40354 457 aa5.46□□□□□ -1.53
ASM4YDL088C RSC6P25632 483 aa5.46□□□□□ -1.54
ASM4YDL088C DSE4P53753 1117 aa5.46□□□□□ -1.54
ASM4YDL088C COQ2P32378 372 aa5.45□□□□□ -1.54
ASM4YDL088C MAC1P35192 417 aa5.45□□□□□ -1.54
ASM4YDL088C IRS4P36115 615 aaKnown RBP5.45□□□□□ -1.54
ASM4YDL088C ARI1P53111 347 aaKnown RBP5.45□□□□□ -1.54
ASM4YDL088C TIF6Q12522 245 aaKnown RBP5.45□□□□□ -1.54
ASM4YDL088C KTR2P33550 425 aa5.44□□□□□ -1.54
ASM4YDL088C GLO3P38682 493 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms