RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W MET1P36150 593 aa8.25□□□□□ -1.09
SLX1YBR228W YMR187CQ03236 431 aa8.25□□□□□ -1.09
SLX1YBR228W CAB1Q04430 367 aa8.25□□□□□ -1.09
SLX1YBR228W HEH2Q03281 663 aa8.23□□□□□ -1.09
SLX1YBR228W YML083CQ04526 418 aa8.23□□□□□ -1.09
SLX1YBR228W PUN1Q06991 263 aa8.23□□□□□ -1.09
SLX1YBR228W ALD4P46367 519 aaKnown RBP8.21□□□□□ -1.1
SLX1YBR228W SKP1P52286 194 aa8.21□□□□□ -1.1
SLX1YBR228W APM2P38700 605 aa8.2□□□□□ -1.1
SLX1YBR228W RPC31P17890 251 aa8.19□□□□□ -1.1
SLX1YBR228W MRPL33P20084 86 aa8.19□□□□□ -1.1
SLX1YBR228W PUF6Q04373 656 aaKnown RBP8.19□□□□□ -1.1
SLX1YBR228W VMA3P25515 160 aa8.18□□□□□ -1.1
SLX1YBR228W YBR197CP38306 217 aa8.18□□□□□ -1.1
SLX1YBR228W MCX1P38323 520 aaPredicted RBP8.18□□□□□ -1.1
SLX1YBR228W PRK1P40494 810 aa8.18□□□□□ -1.1
SLX1YBR228W NOB1Q08444 459 aaKnown RBP8.18□□□□□ -1.1
SLX1YBR228W ISC10P32645 267 aa8.17□□□□□ -1.1
SLX1YBR228W DYS1P38791 387 aa8.17□□□□□ -1.1
SLX1YBR228W YNR040WP53736 256 aa8.17□□□□□ -1.1
SLX1YBR228W ALG14P38242 237 aa8.16□□□□□ -1.1
SLX1YBR228W CCT8P47079 568 aaKnown RBP8.16□□□□□ -1.1
SLX1YBR228W SKN7P38889 622 aa8.15□□□□□ -1.1
SLX1YBR228W PGM2P37012 569 aaKnown RBP8.14□□□□□ -1.11
SLX1YBR228W SRS2P12954 1174 aa8.13□□□□□ -1.11
SLX1YBR228W LDH1P38139 375 aa8.13□□□□□ -1.11
SLX1YBR228W BSD2P38356 321 aa8.13□□□□□ -1.11
SLX1YBR228W YOR296WQ08748 1289 aa8.13□□□□□ -1.11
SLX1YBR228W YDR215CQ12240 137 aa8.13□□□□□ -1.11
SLX1YBR228W NHA1Q99271 985 aa8.13□□□□□ -1.11
SLX1YBR228W YCK2P23292 546 aaKnown RBP8.12□□□□□ -1.11
SLX1YBR228W SLN1P39928 1220 aaPredicted RBP8.12□□□□□ -1.11
SLX1YBR228W RLF2Q12495 606 aa8.12□□□□□ -1.11
SLX1YBR228W NAB2P32505 525 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SLX1YBR228W TAT1P38085 619 aa8.11□□□□□ -1.11
SLX1YBR228W ITC1P53125 1264 aa8.11□□□□□ -1.11
SLX1YBR228W IDI1P15496 288 aa8.1□□□□□ -1.11
SLX1YBR228W GIP1P38229 639 aa8.1□□□□□ -1.11
SLX1YBR228W PRY1P47032 299 aa8.1□□□□□ -1.11
SLX1YBR228W SBP1P10080 294 aaKnown RBP8.09□□□□□ -1.11
SLX1YBR228W NAR1P23503 491 aaKnown RBP8.09□□□□□ -1.11
SLX1YBR228W CWC15Q03772 175 aaKnown RBP8.09□□□□□ -1.11
SLX1YBR228W MCA1Q08601 432 aa8.09□□□□□ -1.11
SLX1YBR228W GIS4Q04233 774 aa8.08□□□□□ -1.12
SLX1YBR228W PNP1Q05788 311 aa8.08□□□□□ -1.12
SLX1YBR228W ISW1P38144 1129 aa8.07□□□□□ -1.12
SLX1YBR228W MRP10O75012 95 aa8.06□□□□□ -1.12
SLX1YBR228W RRN6P32786 894 aa8.06□□□□□ -1.12
SLX1YBR228W TPS3P38426 1054 aaKnown RBP8.06□□□□□ -1.12
SLX1YBR228W SUB2Q07478 446 aaKnown RBP8.05□□□□□ -1.12
SLX1YBR228W MSN1P22148 382 aa8.04□□□□□ -1.12
SLX1YBR228W YER156CP40093 338 aaKnown RBP8.04□□□□□ -1.12
SLX1YBR228W SUT1P53032 299 aaKnown RBP8.04□□□□□ -1.12
SLX1YBR228W FIR1P40020 876 aa8.03□□□□□ -1.12
SLX1YBR228W YJL181WP46987 611 aa8.03□□□□□ -1.12
SLX1YBR228W HXT8P40886 569 aa8.02□□□□□ -1.13
SLX1YBR228W RSC2Q06488 889 aa8.01□□□□□ -1.13
SLX1YBR228W FUR4P05316 633 aaKnown RBP8□□□□□ -1.13
SLX1YBR228W AMN1P38285 549 aaPredicted RBP8□□□□□ -1.13
SLX1YBR228W RRM3P38766 723 aa8□□□□□ -1.13
SLX1YBR228W LSB6P42951 607 aa8□□□□□ -1.13
SLX1YBR228W PPT1P53043 513 aa8□□□□□ -1.13
SLX1YBR228W BUD9P53226 547 aa7.99□□□□□ -1.13
SLX1YBR228W YBR287WP38355 427 aa7.98□□□□□ -1.13
SLX1YBR228W YIL165CP40446 119 aa7.98□□□□□ -1.13
SLX1YBR228W RPL34AP87262 121 aaPredicted RBP7.98□□□□□ -1.13
SLX1YBR228W GAS5Q08193 484 aa7.98□□□□□ -1.13
SLX1YBR228W RPB10P22139 70 aa7.97□□□□□ -1.13
SLX1YBR228W BOI1P38041 980 aaKnown RBP7.97□□□□□ -1.13
SLX1YBR228W TED1P40533 473 aa7.97□□□□□ -1.13
SLX1YBR228W AIM46P38885 310 aa7.95□□□□□ -1.14
SLX1YBR228W SOK2P53438 785 aaPredicted RBP7.95□□□□□ -1.14
SLX1YBR228W EMG1Q06287 252 aaKnown RBP7.95□□□□□ -1.14
SLX1YBR228W BOL3P39724 118 aa7.94□□□□□ -1.14
SLX1YBR228W YPL034WQ03083 165 aa7.94□□□□□ -1.14
SLX1YBR228W SLP1Q12232 587 aa7.94□□□□□ -1.14
SLX1YBR228W GIP2P40036 548 aa7.93□□□□□ -1.14
SLX1YBR228W AI3P03877 415 aa7.92□□□□□ -1.14
SLX1YBR228W KTR2P33550 425 aa7.92□□□□□ -1.14
SLX1YBR228W RAD55P38953 406 aa7.92□□□□□ -1.14
SLX1YBR228W RGD2P43556 714 aa7.92□□□□□ -1.14
SLX1YBR228W APC11Q12157 165 aa7.92□□□□□ -1.14
SLX1YBR228W SAC7P17121 654 aa7.91□□□□□ -1.14
SLX1YBR228W NRD1P53617 575 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
SLX1YBR228W LSO1Q3E827 93 aa7.91□□□□□ -1.14
SLX1YBR228W INP51P40559 946 aaKnown RBP7.9□□□□□ -1.14
SLX1YBR228W KAR5Q04746 504 aa7.9□□□□□ -1.14
SLX1YBR228W SMC1P32908 1225 aa7.89□□□□□ -1.15
SLX1YBR228W NTA1P40354 457 aa7.89□□□□□ -1.15
SLX1YBR228W TIF6Q12522 245 aaKnown RBP7.89□□□□□ -1.15
SLX1YBR228W TY4B-PA0A0B7P3V8 1104 aa7.88□□□□□ -1.15
SLX1YBR228W TY4A-HQ6Q5P6 413 aa7.88□□□□□ -1.15
SLX1YBR228W SFA1P32771 386 aa7.87□□□□□ -1.15
SLX1YBR228W GLO3P38682 493 aaKnown RBP7.87□□□□□ -1.15
SLX1YBR228W FUS1P11710 512 aa7.86□□□□□ -1.15
SLX1YBR228W PSY2P40164 858 aa7.86□□□□□ -1.15
SLX1YBR228W ALD3P54114 506 aa7.86□□□□□ -1.15
SLX1YBR228W IRS4P36115 615 aaKnown RBP7.85□□□□□ -1.15
SLX1YBR228W ARI1P53111 347 aaKnown RBP7.85□□□□□ -1.15
SLX1YBR228W SSA1P10591 642 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 117.8 ms