RNA–Protein interactions for RNA: YBR023C

CHS3, Transcript of Chitin synthase III, yeast

Gene CHS3, Length 3,498 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS3	YBR023C	ROM1	P53046	1155 aa		4.12	□□□□□ -1.75
CHS3	YBR023C	ENT2	Q05785	613 aa		4.12	□□□□□ -1.75
CHS3	YBR023C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CHS3	YBR023C	ATG1	P53104	897 aa		4.12	□□□□□ -1.75
CHS3	YBR023C	FOL1	P53848	824 aa		4.12	□□□□□ -1.75
CHS3	YBR023C	MSH4	P40965	878 aa	Predicted RBP	4.12	□□□□□ -1.75
CHS3	YBR023C	SET4	P42948	560 aa		4.12	□□□□□ -1.75
CHS3	YBR023C	SSF2	Q12153	453 aa	Predicted RBP	4.12	□□□□□ -1.75
CHS3	YBR023C	TRX2	P22803	104 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	VAN1	P23642	535 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	SUT1	P53032	299 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	GDE1	Q02979	1223 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	GRX1	P25373	110 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	DAS1	P47005	663 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	TDA5	Q06417	326 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	YOL036W	Q08206	761 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	PDR5	P33302	1511 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	CYT1	P07143	309 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	YEF3	P16521	1044 aa	Known RBP	4.11	□□□□□ -1.75
CHS3	YBR023C	GRX4	P32642	244 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	DNM1	P54861	757 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	BDS1	Q08347	646 aa		4.11	□□□□□ -1.75
CHS3	YBR023C	PHO8	P11491	566 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	CLN2	P20438	545 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	RPB10	P22139	70 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	NYV1	Q12255	253 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	YDL206W	Q12424	762 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	PET112	P33893	541 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	YJR107W	P47145	328 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	YDL121C	Q07541	149 aa		4.1	□□□□□ -1.75
CHS3	YBR023C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CHS3	YBR023C	RAD27	P26793	382 aa		4.09	□□□□□ -1.75
CHS3	YBR023C	TUB4	P53378	473 aa		4.09	□□□□□ -1.75
CHS3	YBR023C	DAK2	P43550	591 aa		4.09	□□□□□ -1.76
CHS3	YBR023C	FAA4	P47912	694 aa	Known RBP	4.09	□□□□□ -1.76
CHS3	YBR023C	ERR1	P0CX10	437 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	ERR2	P0CX11	437 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	SRS2	P12954	1174 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	PHO87	P25360	923 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	KIP2	P28743	706 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	BOI1	P38041	980 aa	Known RBP	4.08	□□□□□ -1.76
CHS3	YBR023C	CSC1	Q06538	782 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	BDF2	Q07442	638 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	BAS1	P22035	811 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	FUI1	P38196	639 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	RSC30	P38781	883 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CHS3	YBR023C	GTT3	P39996	337 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	RPP1B	P10622	106 aa	Known RBP	4.08	□□□□□ -1.76
CHS3	YBR023C	ISC10	P32645	267 aa		4.08	□□□□□ -1.76
CHS3	YBR023C	SLI15	P38283	698 aa		4.07	□□□□□ -1.76
CHS3	YBR023C	HAP4	P14064	554 aa		4.07	□□□□□ -1.76
CHS3	YBR023C	STR2	P47164	639 aa		4.07	□□□□□ -1.76
CHS3	YBR023C	TY4A-J	P47023	414 aa		4.07	□□□□□ -1.76
CHS3	YBR023C	MTC5	Q03897	1148 aa		4.07	□□□□□ -1.76
CHS3	YBR023C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
CHS3	YBR023C	NIT1	P40447	199 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	PUS6	P53294	404 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	YNL115C	P53925	644 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	STE20	Q03497	939 aa	Known RBP	4.06	□□□□□ -1.76
CHS3	YBR023C	GPI13	Q07830	1017 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	SIT4	P20604	311 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	BUD31	P25337	157 aa	Predicted RBP	4.06	□□□□□ -1.76
CHS3	YBR023C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	PIN2	Q12057	282 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	GCN2	P15442	1659 aa		4.06	□□□□□ -1.76
CHS3	YBR023C	TEC1	P18412	486 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	SFP1	P32432	683 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	TYW3	P53177	273 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	ALO1	P54783	526 aa	Known RBP	4.05	□□□□□ -1.76
CHS3	YBR023C	FAL1	Q12099	399 aa	Known RBP	4.05	□□□□□ -1.76
CHS3	YBR023C	TRS33	Q99394	268 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	UBP12	P39538	1254 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	RPN4	Q03465	531 aa		4.05	□□□□□ -1.76
CHS3	YBR023C	SPT2	P06843	333 aa	Predicted RBP	4.04	□□□□□ -1.76
CHS3	YBR023C	TYS1	P36421	394 aa	Known RBP	4.04	□□□□□ -1.76
CHS3	YBR023C	ACF4	P47129	309 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	YGR125W	P53273	1036 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	NUP145	P49687	1317 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	GUT2	P32191	649 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	YKL069W	P36088	180 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	YAP1801	P38856	637 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	HLJ1	P48353	224 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	TOS4	Q06266	489 aa		4.04	□□□□□ -1.76
CHS3	YBR023C	ESF1	Q06344	628 aa	Known RBP	4.04	□□□□□ -1.76
CHS3	YBR023C	GCD11	P32481	527 aa	Known RBP	4.03	□□□□□ -1.76
CHS3	YBR023C	YAP5	P40574	245 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	SND1	Q04007	877 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	TRS120	Q04183	1289 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	PHO4	P07270	312 aa	Known RBP	4.03	□□□□□ -1.76
CHS3	YBR023C	NTH2	P35172	780 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	FIG4	P42837	879 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	CWH41	P53008	833 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	ISR1	Q06098	443 aa	Known RBP	4.03	□□□□□ -1.76
CHS3	YBR023C	GAS4	Q08271	471 aa		4.03	□□□□□ -1.76
CHS3	YBR023C	CFT1	Q06632	1357 aa	Known RBP	4.03	□□□□□ -1.76
CHS3	YBR023C	BUD6	P41697	788 aa		4.02	□□□□□ -1.77
CHS3	YBR023C	OXR1	Q08952	273 aa		4.02	□□□□□ -1.77
CHS3	YBR023C	TSC13	Q99190	310 aa		4.02	□□□□□ -1.77
CHS3	YBR023C	PDR11	P40550	1411 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 169.6 ms