RNA–Protein interactions for RNA: YBL003C

HTA2, Transcript of Histone H2A, yeast

Gene HTA2, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA2	YBL003C	PET112	P33893	541 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	YBR197C	P38306	217 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	DAK2	P43550	591 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	APP1	P53933	587 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	YNL011C	P53980	444 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	VPS72	Q03388	795 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	SPR28	Q04921	423 aa		5.27	□□□□□ -1.57
HTA2	YBL003C	CDC53	Q12018	815 aa	Known RBP	5.27	□□□□□ -1.57
HTA2	YBL003C	SSF2	Q12153	453 aa	Predicted RBP	5.27	□□□□□ -1.57
HTA2	YBL003C	CDC4	P07834	779 aa		5.26	□□□□□ -1.57
HTA2	YBL003C	BOI1	P38041	980 aa	Known RBP	5.26	□□□□□ -1.57
HTA2	YBL003C	RPS26A	P39938	119 aa	Known RBP	5.26	□□□□□ -1.57
HTA2	YBL003C	RPS26B	P39939	119 aa	Known RBP	5.26	□□□□□ -1.57
HTA2	YBL003C	YGR122W	P53272	402 aa		5.26	□□□□□ -1.57
HTA2	YBL003C	ATG20	Q07528	640 aa		5.26	□□□□□ -1.57
HTA2	YBL003C	APC11	Q12157	165 aa		5.26	□□□□□ -1.57
HTA2	YBL003C	RPS6A	P0CX37	236 aa	Known RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	RPS6B	P0CX38	236 aa	Predicted RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	SSB1	P11484	613 aa	Known RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	TRK1	P12685	1235 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	ISC10	P32645	267 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	CIC1	P38779	376 aa	Known RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	HAL5	P38970	855 aa	Known RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	SSB2	P40150	613 aa	Known RBP	5.25	□□□□□ -1.57
HTA2	YBL003C	BUD6	P41697	788 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	CDC55	Q00362	526 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	BDS1	Q08347	646 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	MET32	Q12041	191 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	YGR161W-C	Q3E744	92 aa		5.25	□□□□□ -1.57
HTA2	YBL003C	MET6	P05694	767 aa	Known RBP	5.24	□□□□□ -1.57
HTA2	YBL003C	CYC8	P14922	966 aa		5.24	□□□□□ -1.57
HTA2	YBL003C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
HTA2	YBL003C	HST3	P53687	447 aa		5.24	□□□□□ -1.57
HTA2	YBL003C	SRC1	Q03707	834 aa		5.24	□□□□□ -1.57
HTA2	YBL003C	SMC1	P32908	1225 aa		5.23	□□□□□ -1.57
HTA2	YBL003C	YRB30	P53107	440 aa	Predicted RBP	5.23	□□□□□ -1.57
HTA2	YBL003C	RAD2	P07276	1031 aa		5.22	□□□□□ -1.57
HTA2	YBL003C	ASH1	P34233	588 aa		5.22	□□□□□ -1.57
HTA2	YBL003C	TBS1	P38114	1094 aa		5.22	□□□□□ -1.57
HTA2	YBL003C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
HTA2	YBL003C	BDF2	Q07442	638 aa		5.22	□□□□□ -1.57
HTA2	YBL003C	NOC3	Q07896	663 aa	Predicted RBP	5.22	□□□□□ -1.57
HTA2	YBL003C	RPP2B	P02400	110 aa	Known RBP	5.21	□□□□□ -1.58
HTA2	YBL003C	SWI5	P08153	709 aa		5.21	□□□□□ -1.58
HTA2	YBL003C	GRX1	P25373	110 aa	Known RBP	5.21	□□□□□ -1.58
HTA2	YBL003C	UGA3	P26370	528 aa		5.21	□□□□□ -1.58
HTA2	YBL003C	MNN1	P39106	762 aa		5.21	□□□□□ -1.58
HTA2	YBL003C	CHZ1	P40019	153 aa	Predicted RBP	5.21	□□□□□ -1.58
HTA2	YBL003C	MRPS18	P42847	217 aa		5.21	□□□□□ -1.58
HTA2	YBL003C	AFT1	P22149	690 aa		5.2	□□□□□ -1.58
HTA2	YBL003C	UTR2	P32623	467 aa		5.2	□□□□□ -1.58
HTA2	YBL003C	MRT4	P33201	236 aa	Known RBP	5.2	□□□□□ -1.58
HTA2	YBL003C	MSH4	P40965	878 aa	Predicted RBP	5.2	□□□□□ -1.58
HTA2	YBL003C	RSC4	Q02206	625 aa		5.2	□□□□□ -1.58
HTA2	YBL003C	FOX2	Q02207	900 aa	Known RBP	5.2	□□□□□ -1.58
HTA2	YBL003C	CAB1	Q04430	367 aa		5.2	□□□□□ -1.58
HTA2	YBL003C	MCD1	Q12158	566 aa		5.2	□□□□□ -1.58
HTA2	YBL003C	DAT1	P13483	248 aa	Known RBP	5.19	□□□□□ -1.58
HTA2	YBL003C	GRX4	P32642	244 aa		5.19	□□□□□ -1.58
HTA2	YBL003C	MKS1	P34072	584 aa		5.19	□□□□□ -1.58
HTA2	YBL003C	EMW1	P42842	904 aa	Known RBP	5.19	□□□□□ -1.58
HTA2	YBL003C	SUT1	P53032	299 aa	Known RBP	5.19	□□□□□ -1.58
HTA2	YBL003C	HUL5	P53119	910 aa		5.19	□□□□□ -1.58
HTA2	YBL003C	NAN1	Q02931	896 aa	Known RBP	5.19	□□□□□ -1.58
HTA2	YBL003C	GDE1	Q02979	1223 aa		5.19	□□□□□ -1.58
HTA2	YBL003C	HXK1	P04806	485 aa	Known RBP	5.18	□□□□□ -1.58
HTA2	YBL003C	KAR2	P16474	682 aa	Known RBP	5.18	□□□□□ -1.58
HTA2	YBL003C	RPB10	P22139	70 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	PRE9	P23638	258 aa	Known RBP	5.18	□□□□□ -1.58
HTA2	YBL003C	SWE1	P32944	819 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	YBR287W	P38355	427 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	YHL008C	P38750	627 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	NUP82	P40368	713 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	KRI1	P42846	591 aa	Known RBP	5.18	□□□□□ -1.58
HTA2	YBL003C	BSC2	Q05611	235 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	SRF1	Q12516	437 aa		5.18	□□□□□ -1.58
HTA2	YBL003C	MRPL33	P20084	86 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	SCD5	P34758	872 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	HXT8	P40886	569 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	BRE2	P43132	505 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	MTO1	P53070	669 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	GCR2	Q01722	534 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	ISU1	Q03020	165 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	TDA5	Q06417	326 aa	Known RBP	5.17	□□□□□ -1.58
HTA2	YBL003C	YLR125W	Q12138	136 aa		5.17	□□□□□ -1.58
HTA2	YBL003C	PHO8	P11491	566 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	MCM1	P11746	286 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	CDC34	P14682	295 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	LDH1	P38139	375 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	YBL086C	P38177	466 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	FIR1	P40020	876 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	TPM2	P40414	161 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	TIM54	P47045	478 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	MSB3	P48566	633 aa	Predicted RBP	5.16	□□□□□ -1.58
HTA2	YBL003C	DAL4	Q04895	635 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	DFG5	Q05031	458 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	YCS4	Q06156	1176 aa		5.16	□□□□□ -1.58
HTA2	YBL003C	RAD4	P14736	754 aa		5.15	□□□□□ -1.59
HTA2	YBL003C	FBP26	P32604	452 aa		5.15	□□□□□ -1.59
HTA2	YBL003C	HXT5	P38695	592 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms