RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RNF123Q5XPI4 1314 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 GORABQ5T7V8 394 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 ANKRD30BQ9BXX2 1392 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 NGDNQ8NEJ9 315 aaKnown RBP3.71□□□□□ -1.82
LPP-221ENST00000618621 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.71□□□□□ -1.82
LPP-221ENST00000618621 RNF20Q5VTR2 975 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 RILPL2Q969X0 211 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.71□□□□□ -1.828e-7■■□□□ 12.6
LPP-221ENST00000618621 EID1Q9Y6B2 187 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 BECN2A8MW95 431 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 FGD5Q6ZNL6 1462 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 PSMA5P28066 241 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 AKNAQ7Z591 1439 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 GNAI1P63096 354 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 DHX8Q14562 1220 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 TICAM2Q86XR7 235 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 HOOK1Q9UJC3 728 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 MINK1Q8N4C8 1332 aaPredicted RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 HMGN5P82970 282 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 NOB1Q9ULX3 412 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 CNTLNQ9NXG0 1405 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 CLGNO14967 610 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 DIAPH1O60610 1272 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 IFIT2P09913 472 aaKnown RBP3.7□□□□□ -1.82
LPP-221ENST00000618621 CCDC70Q6NSX1 233 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 BCL2L13Q9BXK5 485 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.7□□□□□ -1.82
LPP-221ENST00000618621 AK7Q96M32 723 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 SKAP1Q86WV1 359 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 MBD3O95983 291 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 CSB-PGBD3P0DP91 1061 aa3.7□□□□□ -1.82
LPP-221ENST00000618621 NOC3LQ8WTT2 800 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 CCP110O43303 1012 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 SYNE3Q6ZMZ3 975 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 PRDM10Q9NQV6 1147 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 TPM1P09493 284 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 KIF21BO75037 1637 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 HMGB3O15347 200 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 CDC45O75419 566 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 CCDC173Q0VFZ6 552 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 CPLX2Q6PUV4 134 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 NAT10Q9H0A0 1025 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 ERC2O15083 957 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 EIF3AQ14152 1382 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 GCC1Q96CN9 775 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 MIA2Q96PC5 1412 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 HIP1O00291 1037 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 TBC1D2Q9BYX2 928 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 SMC3Q9UQE7 1217 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 ELL2O00472 640 aaPredicted RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 GAPVD1Q14C86 1478 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 SETQ01105 290 aaPredicted RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 MCTP1Q6DN14 999 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 LNPKQ9C0E8 428 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 XRCC6P12956 609 aaKnown RBP eCLIP3.69□□□□□ -1.82
LPP-221ENST00000618621 CREBRFQ8IUR6 639 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 PRG4Q92954 1404 aaPredicted RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 CEBPAP49715 358 aaPredicted RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 CFAP70Q5T0N1 1121 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 BICDL1Q6ZP65 573 aa3.69□□□□□ -1.82
LPP-221ENST00000618621 CCAR2Q8N163 923 aaKnown RBP3.69□□□□□ -1.82
LPP-221ENST00000618621 ARAP1Q96P48 1450 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 BCAR3O75815 825 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 TMX4Q9H1E5 349 aaPredicted RBP3.68□□□□□ -1.82
LPP-221ENST00000618621 ANO2Q9NQ90 1003 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 TCP11L2Q8N4U5 519 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 SLC26A8Q96RN1 970 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 RBM33Q96EV2 1170 aaKnown RBP3.68□□□□□ -1.82
LPP-221ENST00000618621 WDR97A6NE52 1622 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 SASS6Q6UVJ0 657 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 GRPEL1Q9HAV7 217 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 TBC1D32Q96NH3 1257 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 IGHDP01880 384 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 R3HCC1Q9Y3T6 440 aaKnown RBP3.68□□□□□ -1.82
LPP-221ENST00000618621 TSPY26PQ9H489 355 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 LRRC9Q6ZRR7 1453 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 FGD6Q6ZV73 1430 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 ZFP91Q96JP5 570 aaPredicted RBP3.68□□□□□ -1.82
LPP-221ENST00000618621 PDCP20941 246 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 CFTRP13569 1480 aa3.68□□□□□ -1.82
LPP-221ENST00000618621 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.68□□□□□ -1.82
LPP-221ENST00000618621 MTHFSP49914 203 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 C1orf115Q9H7X2 142 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 FCHSD2O94868 740 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 C9orf78Q9NZ63 289 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 RARSP54136 660 aaKnown RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 ARGLU1Q9NWB6 273 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 PCDHB15Q9Y5E8 787 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 HMGB1P1B2RPK0 211 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 DHX16O60231 1041 aaKnown RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 TPD52L1Q16890 204 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 PRPF40AO75400 957 aaKnown RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 NCOA1Q15788 1441 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 DUSP27Q5VZP5 1158 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 FAM177A1Q8N128 213 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 CPLX1O14810 134 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 DDX58O95786 925 aaKnown RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 HOMER1Q86YM7 354 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 NOM1Q5C9Z4 860 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms