RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 GCGRP47871 477 aa12.38□□□□□ -0.43
CCL16-204ENST00000610493 MYSM1Q5VVJ2 828 aa12.38□□□□□ -0.43
CCL16-204ENST00000610493 KCTD12Q96CX2 325 aaKnown RBP12.38□□□□□ -0.43
CCL16-204ENST00000610493 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
CCL16-204ENST00000610493 KDM4AO75164 1064 aa12.37□□□□□ -0.43
CCL16-204ENST00000610493 SH3D19Q5HYK7 790 aa12.37□□□□□ -0.43
CCL16-204ENST00000610493 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
CCL16-204ENST00000610493 PPP4CP60510 307 aa12.35□□□□□ -0.43
CCL16-204ENST00000610493 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
CCL16-204ENST00000610493 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
CCL16-204ENST00000610493 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
CCL16-204ENST00000610493 NDUFV2P19404 249 aa12.33□□□□□ -0.43
CCL16-204ENST00000610493 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.43
CCL16-204ENST00000610493 CUX2O14529 1486 aa12.33□□□□□ -0.44
CCL16-204ENST00000610493 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
CCL16-204ENST00000610493 FUT2Q10981 343 aa12.33□□□□□ -0.44
CCL16-204ENST00000610493 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
CCL16-204ENST00000610493 TSR3Q9UJK0 312 aaKnown RBP12.33□□□□□ -0.44
CCL16-204ENST00000610493 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
CCL16-204ENST00000610493 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
CCL16-204ENST00000610493 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
CCL16-204ENST00000610493 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
CCL16-204ENST00000610493 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
CCL16-204ENST00000610493 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
CCL16-204ENST00000610493 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 RIC3Q7Z5B4 369 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 HLA-CQ95604 372 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
CCL16-204ENST00000610493 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
CCL16-204ENST00000610493 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
CCL16-204ENST00000610493 CARMIL1Q5VZK9 1371 aa12.3□□□□□ -0.44
CCL16-204ENST00000610493 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
CCL16-204ENST00000610493 HOXA2O43364 376 aa12.29□□□□□ -0.44
CCL16-204ENST00000610493 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
CCL16-204ENST00000610493 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
CCL16-204ENST00000610493 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
CCL16-204ENST00000610493 PTPN5P54829 565 aa12.29□□□□□ -0.44
CCL16-204ENST00000610493 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
CCL16-204ENST00000610493 APLP1P51693 650 aa12.28□□□□□ -0.44
CCL16-204ENST00000610493 USP46P62068 366 aa12.28□□□□□ -0.44
CCL16-204ENST00000610493 PUS10Q3MIT2 529 aaKnown RBP12.28□□□□□ -0.44
CCL16-204ENST00000610493 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
CCL16-204ENST00000610493 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
CCL16-204ENST00000610493 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
CCL16-204ENST00000610493 FDX1P10109 184 aa12.26□□□□□ -0.45
CCL16-204ENST00000610493 RANGAP1P46060 587 aaPredicted RBP12.26□□□□□ -0.45
CCL16-204ENST00000610493 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
CCL16-204ENST00000610493 SPTLC1O15269 473 aa12.25□□□□□ -0.45
CCL16-204ENST00000610493 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
CCL16-204ENST00000610493 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
CCL16-204ENST00000610493 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
CCL16-204ENST00000610493 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
CCL16-204ENST00000610493 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
CCL16-204ENST00000610493 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
CCL16-204ENST00000610493 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCL16-204ENST00000610493 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
CCL16-204ENST00000610493 QPCTQ16769 361 aa12.21□□□□□ -0.46
CCL16-204ENST00000610493 PCDHB3Q9Y5E6 796 aa12.21□□□□□ -0.46
CCL16-204ENST00000610493 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.46
CCL16-204ENST00000610493 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.46
CCL16-204ENST00000610493 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
CCL16-204ENST00000610493 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
CCL16-204ENST00000610493 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
CCL16-204ENST00000610493 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
CCL16-204ENST00000610493 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 MORN1Q5T089 497 aa12.19□□□□□ -0.46
CCL16-204ENST00000610493 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
CCL16-204ENST00000610493 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
CCL16-204ENST00000610493 SLC27A5Q9Y2P5 690 aa12.19□□□□□ -0.46
CCL16-204ENST00000610493 GJA5P36382 358 aa12.18□□□□□ -0.46
CCL16-204ENST00000610493 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
CCL16-204ENST00000610493 SYMPKQ92797 1274 aaKnown RBP12.18□□□□□ -0.46
CCL16-204ENST00000610493 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
CCL16-204ENST00000610493 C6orf229H3BNL8 230 aa12.17□□□□□ -0.46
CCL16-204ENST00000610493 COPS2P61201 443 aa12.17□□□□□ -0.46
CCL16-204ENST00000610493 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
CCL16-204ENST00000610493 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
CCL16-204ENST00000610493 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCL16-204ENST00000610493 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
CCL16-204ENST00000610493 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
CCL16-204ENST00000610493 LRRC9Q6ZRR7 1453 aa12.15□□□□□ -0.46
CCL16-204ENST00000610493 LILRB3O75022 631 aa12.15□□□□□ -0.47
CCL16-204ENST00000610493 TUSC1Q2TAM9 212 aa12.15□□□□□ -0.47
CCL16-204ENST00000610493 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.47
CCL16-204ENST00000610493 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CCL16-204ENST00000610493 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
CCL16-204ENST00000610493 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
CCL16-204ENST00000610493 RFC5P40937 340 aa12.14□□□□□ -0.47
CCL16-204ENST00000610493 MTMR2Q13614 643 aa12.14□□□□□ -0.47
CCL16-204ENST00000610493 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
CCL16-204ENST00000610493 TSC1Q92574 1164 aa12.13□□□□□ -0.47
CCL16-204ENST00000610493 PRPF38BQ5VTL8 546 aaKnown RBP12.12□□□□□ -0.47
CCL16-204ENST00000610493 RNF19BQ6ZMZ0 732 aa12.12□□□□□ -0.47
CCL16-204ENST00000610493 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms