RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.23
CCL16-204ENST00000610493 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
CCL16-204ENST00000610493 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
CCL16-204ENST00000610493 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
CCL16-204ENST00000610493 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
CCL16-204ENST00000610493 FOXD1Q16676 465 aa22.73■■□□□ 1.23
CCL16-204ENST00000610493 ADRA2BP18089 450 aa22.13■■□□□ 1.13
CCL16-204ENST00000610493 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
CCL16-204ENST00000610493 PIAS4Q8N2W9 510 aaPredicted RBP21.55■■□□□ 1.04
CCL16-204ENST00000610493 MSH5O43196 834 aa20.8■□□□□ 0.92
CCL16-204ENST00000610493 PPP4R3CPQ6ZMV5 832 aa20.57■□□□□ 0.88
CCL16-204ENST00000610493 KCNA4P22459 653 aa20.45■□□□□ 0.86
CCL16-204ENST00000610493 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
CCL16-204ENST00000610493 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.8
CCL16-204ENST00000610493 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.79
CCL16-204ENST00000610493 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
CCL16-204ENST00000610493 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
CCL16-204ENST00000610493 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
CCL16-204ENST00000610493 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
CCL16-204ENST00000610493 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
CCL16-204ENST00000610493 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
CCL16-204ENST00000610493 HOXD11P31277 338 aaPredicted RBP19.25■□□□□ 0.67
CCL16-204ENST00000610493 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
CCL16-204ENST00000610493 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
CCL16-204ENST00000610493 DCAF8L1A6NGE4 600 aa18.88■□□□□ 0.61
CCL16-204ENST00000610493 ZBTB22O15209 634 aa18.81■□□□□ 0.6
CCL16-204ENST00000610493 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
CCL16-204ENST00000610493 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
CCL16-204ENST00000610493 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
CCL16-204ENST00000610493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.549e-7■■□□□ 12.2
CCL16-204ENST00000610493 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
CCL16-204ENST00000610493 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
CCL16-204ENST00000610493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
CCL16-204ENST00000610493 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
CCL16-204ENST00000610493 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
CCL16-204ENST00000610493 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
CCL16-204ENST00000610493 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
CCL16-204ENST00000610493 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.45
CCL16-204ENST00000610493 APLP2Q06481 763 aa17.69■□□□□ 0.42
CCL16-204ENST00000610493 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
CCL16-204ENST00000610493 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
CCL16-204ENST00000610493 CAPN15O75808 1086 aa17.54■□□□□ 0.4
CCL16-204ENST00000610493 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
CCL16-204ENST00000610493 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
CCL16-204ENST00000610493 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
CCL16-204ENST00000610493 POLA2Q14181 598 aa17.29■□□□□ 0.36
CCL16-204ENST00000610493 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CCL16-204ENST00000610493 ABCB7O75027 752 aa17.26■□□□□ 0.35
CCL16-204ENST00000610493 FKBP8Q14318 412 aa17.13■□□□□ 0.33
CCL16-204ENST00000610493 DSG3P32926 999 aa17.11■□□□□ 0.33
CCL16-204ENST00000610493 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CCL16-204ENST00000610493 FBLN2P98095 1184 aa17.03■□□□□ 0.32
CCL16-204ENST00000610493 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
CCL16-204ENST00000610493 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
CCL16-204ENST00000610493 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
CCL16-204ENST00000610493 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
CCL16-204ENST00000610493 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
CCL16-204ENST00000610493 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
CCL16-204ENST00000610493 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
CCL16-204ENST00000610493 PROM2Q8N271 834 aa16.46■□□□□ 0.23
CCL16-204ENST00000610493 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
CCL16-204ENST00000610493 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CCL16-204ENST00000610493 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCL16-204ENST00000610493 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
CCL16-204ENST00000610493 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
CCL16-204ENST00000610493 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
CCL16-204ENST00000610493 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
CCL16-204ENST00000610493 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
CCL16-204ENST00000610493 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
CCL16-204ENST00000610493 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
CCL16-204ENST00000610493 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
CCL16-204ENST00000610493 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
CCL16-204ENST00000610493 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
CCL16-204ENST00000610493 PLCD3Q8N3E9 789 aa15.96■□□□□ 0.15
CCL16-204ENST00000610493 MIER1Q8N108 512 aa15.95■□□□□ 0.14
CCL16-204ENST00000610493 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
CCL16-204ENST00000610493 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
CCL16-204ENST00000610493 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
CCL16-204ENST00000610493 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
CCL16-204ENST00000610493 SPOCK2Q92563 424 aa15.73■□□□□ 0.11
CCL16-204ENST00000610493 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
CCL16-204ENST00000610493 CREBZFQ9NS37 354 aa15.66■□□□□ 0.1
CCL16-204ENST00000610493 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
CCL16-204ENST00000610493 PKD2Q13563 968 aa15.54■□□□□ 0.08
CCL16-204ENST00000610493 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
CCL16-204ENST00000610493 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
CCL16-204ENST00000610493 MNX1P50219 401 aaPredicted RBP15.51■□□□□ 0.07
CCL16-204ENST00000610493 PRKAR2AP13861 404 aaKnown RBP15.47■□□□□ 0.07
CCL16-204ENST00000610493 NUBP1P53384 320 aa15.44■□□□□ 0.06
CCL16-204ENST00000610493 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCL16-204ENST00000610493 ECM2O94769 699 aaPredicted RBP15.43■□□□□ 0.06
CCL16-204ENST00000610493 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
CCL16-204ENST00000610493 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCL16-204ENST00000610493 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
CCL16-204ENST00000610493 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
CCL16-204ENST00000610493 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
CCL16-204ENST00000610493 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
CCL16-204ENST00000610493 GSE1Q14687 1217 aa15.35■□□□□ 0.05
CCL16-204ENST00000610493 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
CCL16-204ENST00000610493 RGL2O15211 777 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms