RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.15
MSH6-212ENST00000607272 CLTCL1P53675 1640 aa15.96■□□□□ 0.14
MSH6-212ENST00000607272 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
MSH6-212ENST00000607272 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 TRAPPC8Q9Y2L5 1435 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 ABCC1P33527 1531 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
MSH6-212ENST00000607272 ANTXR1Q9H6X2 564 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 POGKQ9P215 609 aa15.95■□□□□ 0.14
MSH6-212ENST00000607272 TBC1D32Q96NH3 1257 aa15.94■□□□□ 0.14
MSH6-212ENST00000607272 SLKQ9H2G2 1235 aaPredicted RBP15.94■□□□□ 0.14
MSH6-212ENST00000607272 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
MSH6-212ENST00000607272 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
MSH6-212ENST00000607272 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
MSH6-212ENST00000607272 KANK1Q14678 1352 aa15.93■□□□□ 0.14
MSH6-212ENST00000607272 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
MSH6-212ENST00000607272 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
MSH6-212ENST00000607272 CFAP70Q5T0N1 1121 aa15.92■□□□□ 0.14
MSH6-212ENST00000607272 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
MSH6-212ENST00000607272 MYOM2P54296 1465 aa15.92■□□□□ 0.14
MSH6-212ENST00000607272 TET3O43151 1660 aa15.91■□□□□ 0.14
MSH6-212ENST00000607272 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
MSH6-212ENST00000607272 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
MSH6-212ENST00000607272 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
MSH6-212ENST00000607272 CCDC27Q2M243 656 aa15.9■□□□□ 0.14
MSH6-212ENST00000607272 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
MSH6-212ENST00000607272 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
MSH6-212ENST00000607272 EIF5BO60841 1220 aaKnown RBP15.89■□□□□ 0.13
MSH6-212ENST00000607272 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
MSH6-212ENST00000607272 TBC1D2Q9BYX2 928 aa15.89■□□□□ 0.13
MSH6-212ENST00000607272 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
MSH6-212ENST00000607272 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
MSH6-212ENST00000607272 AFAP1Q8N556 730 aa15.88■□□□□ 0.13
MSH6-212ENST00000607272 ZFYVE16Q7Z3T8 1539 aa15.88■□□□□ 0.13
MSH6-212ENST00000607272 RLBP1P12271 317 aa15.87■□□□□ 0.13
MSH6-212ENST00000607272 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
MSH6-212ENST00000607272 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
MSH6-212ENST00000607272 VWDEQ8N2E2 1590 aa15.86■□□□□ 0.13
MSH6-212ENST00000607272 IQSEC2Q5JU85 1478 aa15.86■□□□□ 0.13
MSH6-212ENST00000607272 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
MSH6-212ENST00000607272 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
MSH6-212ENST00000607272 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
MSH6-212ENST00000607272 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
MSH6-212ENST00000607272 UBE2Q2Q8WVN8 375 aa15.84■□□□□ 0.13
MSH6-212ENST00000607272 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
MSH6-212ENST00000607272 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
MSH6-212ENST00000607272 MVPQ14764 893 aaKnown RBP15.84■□□□□ 0.13
MSH6-212ENST00000607272 SHPRHQ149N8 1683 aa15.84■□□□□ 0.13
MSH6-212ENST00000607272 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.13
MSH6-212ENST00000607272 MCM4P33991 863 aa15.83■□□□□ 0.12
MSH6-212ENST00000607272 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
MSH6-212ENST00000607272 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 KIF3BO15066 747 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 TNNT2P45379 298 aaPredicted RBP15.82■□□□□ 0.12
MSH6-212ENST00000607272 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 CHMP5Q9NZZ3 219 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
MSH6-212ENST00000607272 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
MSH6-212ENST00000607272 C22orf23Q9BZE7 217 aa15.81■□□□□ 0.12
MSH6-212ENST00000607272 ZCCHC11Q5TAX3 1644 aaKnown RBP15.81■□□□□ 0.12
MSH6-212ENST00000607272 ZNF518AQ6AHZ1 1483 aa15.81■□□□□ 0.12
MSH6-212ENST00000607272 MTHFSP49914 203 aa15.8■□□□□ 0.12
MSH6-212ENST00000607272 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
MSH6-212ENST00000607272 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
MSH6-212ENST00000607272 BBXQ8WY36 941 aaPredicted RBP15.8■□□□□ 0.12
MSH6-212ENST00000607272 SLC12A5Q9H2X9 1139 aa15.8■□□□□ 0.12
MSH6-212ENST00000607272 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
MSH6-212ENST00000607272 CHD1O14646 1710 aa15.79■□□□□ 0.12
MSH6-212ENST00000607272 RRAGDQ9NQL2 400 aaPredicted RBP15.79■□□□□ 0.12
MSH6-212ENST00000607272 ATP7AQ04656 1500 aa15.79■□□□□ 0.12
MSH6-212ENST00000607272 KIF1BO60333 1816 aa15.79■□□□□ 0.12
MSH6-212ENST00000607272 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
MSH6-212ENST00000607272 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
MSH6-212ENST00000607272 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
MSH6-212ENST00000607272 UGGT1Q9NYU2 1555 aa15.77■□□□□ 0.12
MSH6-212ENST00000607272 ADGRL1O94910 1474 aa15.77■□□□□ 0.12
MSH6-212ENST00000607272 IFT172Q9UG01 1749 aa15.77■□□□□ 0.11
MSH6-212ENST00000607272 USP32Q8NFA0 1604 aa15.77■□□□□ 0.11
MSH6-212ENST00000607272 PUS7Q96PZ0 661 aaKnown RBP15.76■□□□□ 0.11
MSH6-212ENST00000607272 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
MSH6-212ENST00000607272 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
MSH6-212ENST00000607272 DDX19BQ9UMR2 479 aa15.76■□□□□ 0.11
MSH6-212ENST00000607272 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
MSH6-212ENST00000607272 NSD2O96028 1365 aa15.75■□□□□ 0.11
MSH6-212ENST00000607272 TRAK2O60296 914 aa15.75■□□□□ 0.11
MSH6-212ENST00000607272 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
MSH6-212ENST00000607272 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
MSH6-212ENST00000607272 C14orf93Q9H972 538 aaKnown RBP15.75■□□□□ 0.11
MSH6-212ENST00000607272 EFCAB6Q5THR3 1501 aa15.75■□□□□ 0.11
MSH6-212ENST00000607272 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
MSH6-212ENST00000607272 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
MSH6-212ENST00000607272 ISY1Q9ULR0 285 aaKnown RBP15.75■□□□□ 0.11
MSH6-212ENST00000607272 DDX11L8A8MPP1 907 aa15.74■□□□□ 0.11
MSH6-212ENST00000607272 MRE11P49959 708 aa15.74■□□□□ 0.11
MSH6-212ENST00000607272 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
MSH6-212ENST00000607272 NOS1P29475 1434 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms