RNA–Protein interactions for RNA: ENST00000580086.1

MSL1-207, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 2,638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-207ENST00000580086 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 OGFRQ9NZT2 677 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 CHIC2Q9UKJ5 165 aa9.69□□□□□ -0.86
MSL1-207ENST00000580086 ARHGEF12Q9NZN5 1544 aa9.68□□□□□ -0.86
MSL1-207ENST00000580086 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
MSL1-207ENST00000580086 MFAP1P55081 439 aaKnown RBP9.68□□□□□ -0.86
MSL1-207ENST00000580086 ZSCAN23Q3MJ62 389 aa9.68□□□□□ -0.86
MSL1-207ENST00000580086 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
MSL1-207ENST00000580086 ANKRD7Q92527 254 aa9.68□□□□□ -0.86
MSL1-207ENST00000580086 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
MSL1-207ENST00000580086 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
MSL1-207ENST00000580086 TULP2O00295 520 aa9.67□□□□□ -0.86
MSL1-207ENST00000580086 CARD11Q9BXL7 1154 aa9.67□□□□□ -0.86
MSL1-207ENST00000580086 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
MSL1-207ENST00000580086 MMP14P50281 582 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 CAMSAP2Q08AD1 1489 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
MSL1-207ENST00000580086 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
MSL1-207ENST00000580086 BCAR3O75815 825 aa9.65□□□□□ -0.86
MSL1-207ENST00000580086 ADAMTS8Q9UP79 889 aa9.65□□□□□ -0.86
MSL1-207ENST00000580086 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.87
MSL1-207ENST00000580086 SLFN14P0C7P3 912 aa9.65□□□□□ -0.87
MSL1-207ENST00000580086 FAM193AP78312 1265 aa9.65□□□□□ -0.87
MSL1-207ENST00000580086 TSC1Q92574 1164 aa9.65□□□□□ -0.87
MSL1-207ENST00000580086 RWDD1Q9H446 243 aaPredicted RBP9.65□□□□□ -0.87
MSL1-207ENST00000580086 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.87
MSL1-207ENST00000580086 PZPP20742 1482 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 U2AF2P26368 475 aaKnown RBP eCLIP9.64□□□□□ -0.873e-23■■■■■ 30.1
MSL1-207ENST00000580086 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
MSL1-207ENST00000580086 LRSAM1Q6UWE0 723 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
MSL1-207ENST00000580086 IGSF3O75054 1194 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 SSFA2P28290 1259 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 CAVIN1Q6NZI2 390 aaKnown RBP9.64□□□□□ -0.87
MSL1-207ENST00000580086 DIAPH3Q9NSV4 1193 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 FAM135AQ9P2D6 1515 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 AK9Q5TCS8 1911 aa9.64□□□□□ -0.87
MSL1-207ENST00000580086 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 E9PSI1 815 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 PTMAP06454 111 aaKnown RBP9.63□□□□□ -0.87
MSL1-207ENST00000580086 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
MSL1-207ENST00000580086 NOLC1Q14978 699 aaKnown RBP eCLIP9.63□□□□□ -0.87
MSL1-207ENST00000580086 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
MSL1-207ENST00000580086 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 CHMP4AQ9BY43 222 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 SPTLC3Q9NUV7 552 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 COG6Q9Y2V7 657 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 SAMD9Q5K651 1589 aa9.63□□□□□ -0.87
MSL1-207ENST00000580086 SYCP1Q15431 976 aa9.62□□□□□ -0.87
MSL1-207ENST00000580086 CREBRFQ8IUR6 639 aa9.62□□□□□ -0.87
MSL1-207ENST00000580086 LMBRD1Q9NUN5 540 aa9.62□□□□□ -0.87
MSL1-207ENST00000580086 DNMT1P26358 1616 aaKnown RBP9.62□□□□□ -0.87
MSL1-207ENST00000580086 ERCC6Q03468 1493 aa9.62□□□□□ -0.87
MSL1-207ENST00000580086 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
MSL1-207ENST00000580086 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
MSL1-207ENST00000580086 BCCIPQ9P287 314 aaKnown RBP eCLIP9.62□□□□□ -0.87
MSL1-207ENST00000580086 CLGNO14967 610 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
MSL1-207ENST00000580086 CAPN2P17655 700 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 GEMIN8Q9NWZ8 242 aaKnown RBP9.61□□□□□ -0.87
MSL1-207ENST00000580086 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 NUCB2P80303 420 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 PANK1Q8TE04 598 aa9.61□□□□□ -0.87
MSL1-207ENST00000580086 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
MSL1-207ENST00000580086 TERF2Q15554 542 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 CC2D1BQ5T0F9 858 aaKnown RBP9.6□□□□□ -0.87
MSL1-207ENST00000580086 CEP170Q5SW79 1584 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 TRIM6-TRIM34B2RNG4 842 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 CHAF1AQ13111 956 aaPredicted RBP9.6□□□□□ -0.87
MSL1-207ENST00000580086 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
MSL1-207ENST00000580086 MCTP1Q6DN14 999 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
MSL1-207ENST00000580086 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 DAPK1P53355 1430 aa9.6□□□□□ -0.87
MSL1-207ENST00000580086 LAMC1P11047 1609 aa9.59□□□□□ -0.87
MSL1-207ENST00000580086 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
MSL1-207ENST00000580086 CTNNA3Q9UI47 895 aa9.59□□□□□ -0.87
MSL1-207ENST00000580086 DDX41Q9UJV9 622 aaKnown RBP9.59□□□□□ -0.87
MSL1-207ENST00000580086 WDR62O43379 1518 aa9.59□□□□□ -0.87
MSL1-207ENST00000580086 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
MSL1-207ENST00000580086 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
MSL1-207ENST00000580086 PSEN1P49768 467 aa9.58□□□□□ -0.88
MSL1-207ENST00000580086 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
MSL1-207ENST00000580086 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
MSL1-207ENST00000580086 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
MSL1-207ENST00000580086 MAPK8IP2Q13387 824 aaPredicted RBP9.57□□□□□ -0.88
MSL1-207ENST00000580086 UVSSAQ2YD98 709 aa9.57□□□□□ -0.88
MSL1-207ENST00000580086 UHRF1BP1LA0JNW5 1464 aa9.57□□□□□ -0.88
MSL1-207ENST00000580086 CYP2E1P05181 493 aaPredicted RBP9.57□□□□□ -0.88
MSL1-207ENST00000580086 CERS3Q8IU89 383 aa9.57□□□□□ -0.88
MSL1-207ENST00000580086 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
MSL1-207ENST00000580086 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms