RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 MS4A4AQ96JQ5 239 aa9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 TIGD1Q96MW7 591 aa9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.81
TOM1L1-220ENST00000575333 TRAK2O60296 914 aa9.96□□□□□ -0.81
TOM1L1-220ENST00000575333 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.81
TOM1L1-220ENST00000575333 SKOR2Q2VWA4 1001 aaPredicted RBP9.96□□□□□ -0.81
TOM1L1-220ENST00000575333 CENPQQ7L2Z9 268 aaPredicted RBP9.96□□□□□ -0.81
TOM1L1-220ENST00000575333 C8orf34Q49A92 452 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 ASTLQ6HA08 431 aaPredicted RBP9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 TMC1Q8TDI8 760 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 PLCD4Q9BRC7 762 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 POLR3GLQ9BT43 218 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 CALCOCO1Q9P1Z2 691 aa9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 NOL7Q9UMY1 257 aaKnown RBP9.96□□□□□ -0.82
TOM1L1-220ENST00000575333 IGF1RP08069 1367 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 TONSLQ96HA7 1378 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 CTR9Q6PD62 1173 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 EXOC6Q8TAG9 804 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 FEZ1Q99689 392 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 ADAMTS12P58397 1594 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
TOM1L1-220ENST00000575333 TULP2O00295 520 aa9.94□□□□□ -0.82
TOM1L1-220ENST00000575333 GTF2F1P35269 517 aaKnown RBP eCLIP9.94□□□□□ -0.82
TOM1L1-220ENST00000575333 NBPF20Q3BBV1 942 aa9.94□□□□□ -0.82
TOM1L1-220ENST00000575333 KCNJ4P48050 445 aa9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 ZNF771Q7L3S4 317 aaPredicted RBP9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 MYRIPQ8NFW9 859 aa9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 E9PSI1 815 aa9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 CFAP65Q6ZU64 1925 aaKnown RBP9.93□□□□□ -0.82
TOM1L1-220ENST00000575333 CUL7Q14999 1698 aa9.92□□□□□ -0.82
TOM1L1-220ENST00000575333 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
TOM1L1-220ENST00000575333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.824e-8■■□□□ 11.7
TOM1L1-220ENST00000575333 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
TOM1L1-220ENST00000575333 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 DCBLD2Q96PD2 775 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 CHMP5Q9NZZ3 219 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 KDM2BQ8NHM5 1336 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 CBX1P83916 185 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
TOM1L1-220ENST00000575333 GRIN2AQ12879 1464 aa9.9□□□□□ -0.82
TOM1L1-220ENST00000575333 SETQ01105 290 aaPredicted RBP9.9□□□□□ -0.82
TOM1L1-220ENST00000575333 HSP90AB3PQ58FF7 597 aa9.9□□□□□ -0.82
TOM1L1-220ENST00000575333 RCAN3Q9UKA8 241 aa9.9□□□□□ -0.82
TOM1L1-220ENST00000575333 NCOA1Q15788 1441 aa9.9□□□□□ -0.83
TOM1L1-220ENST00000575333 NASPP49321 788 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 DPY19L2Q6NUT2 758 aa9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
TOM1L1-220ENST00000575333 HSP90AB1P08238 724 aaKnown RBP9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 LMOD3Q0VAK6 560 aa9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 CCDC184Q52MB2 194 aa9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 AEBP1Q8IUX7 1158 aa9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 EGFL6Q8IUX8 553 aa9.88□□□□□ -0.83
TOM1L1-220ENST00000575333 PDCL2Q8N4E4 241 aa9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 HIRIP3Q9BW71 556 aaPredicted RBP9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 BRMS1Q9HCU9 246 aa9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 OGFRQ9NZT2 677 aa9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 KIAA1107Q9UPP5 1409 aa9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 ROCK2O75116 1388 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-220ENST00000575333 TRIM6-TRIM34B2RNG4 842 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 SLKQ9H2G2 1235 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 CCDC7Q96M83 1385 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 CEP170Q5SW79 1584 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 NCAPGQ9BPX3 1015 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 UPF2Q9HAU5 1272 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
TOM1L1-220ENST00000575333 CTTNBP2Q8WZ74 1663 aa9.85□□□□□ -0.83
TOM1L1-220ENST00000575333 SATB1Q01826 763 aa9.85□□□□□ -0.83
TOM1L1-220ENST00000575333 NGEFQ8N5V2 710 aa9.85□□□□□ -0.83
TOM1L1-220ENST00000575333 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
TOM1L1-220ENST00000575333 PDLIM2Q96JY6 352 aa9.85□□□□□ -0.83
TOM1L1-220ENST00000575333 ATP2B3Q16720 1220 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 GBP4Q96PP9 640 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 RAI14Q9P0K7 980 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 NUP160Q12769 1436 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 NLRP1Q9C000 1473 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 RBM28Q9NW13 759 aaKnown RBP9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 CLASP1Q7Z460 1538 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 RAD50Q92878 1312 aa9.84□□□□□ -0.83
TOM1L1-220ENST00000575333 PRXQ9BXM0 1461 aa9.83□□□□□ -0.84
TOM1L1-220ENST00000575333 TNNT3P45378 269 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms