RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 TARBP1Q13395 1621 aaKnown RBP12.98□□□□□ -0.33
SMG1-209ENST00000563836 CD46P15529 392 aa12.97□□□□□ -0.33
SMG1-209ENST00000563836 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
SMG1-209ENST00000563836 APLP1P51693 650 aa12.96□□□□□ -0.33
SMG1-209ENST00000563836 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
SMG1-209ENST00000563836 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
SMG1-209ENST00000563836 CFHP08603 1231 aa12.95□□□□□ -0.34
SMG1-209ENST00000563836 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
SMG1-209ENST00000563836 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
SMG1-209ENST00000563836 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
SMG1-209ENST00000563836 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
SMG1-209ENST00000563836 SSTR3P32745 418 aaPredicted RBP12.94□□□□□ -0.34
SMG1-209ENST00000563836 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
SMG1-209ENST00000563836 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
SMG1-209ENST00000563836 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
SMG1-209ENST00000563836 GCGRP47871 477 aa12.92□□□□□ -0.34
SMG1-209ENST00000563836 IGF1RP08069 1367 aa12.92□□□□□ -0.34
SMG1-209ENST00000563836 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
SMG1-209ENST00000563836 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
SMG1-209ENST00000563836 TNIKQ9UKE5 1360 aa12.91□□□□□ -0.34
SMG1-209ENST00000563836 MS4A1P11836 297 aa12.9□□□□□ -0.34
SMG1-209ENST00000563836 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
SMG1-209ENST00000563836 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
SMG1-209ENST00000563836 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
SMG1-209ENST00000563836 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMG1-209ENST00000563836 KDM4CQ9H3R0 1056 aa12.86□□□□□ -0.35
SMG1-209ENST00000563836 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
SMG1-209ENST00000563836 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
SMG1-209ENST00000563836 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
SMG1-209ENST00000563836 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
SMG1-209ENST00000563836 FUT2Q10981 343 aa12.84□□□□□ -0.35
SMG1-209ENST00000563836 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
SMG1-209ENST00000563836 KDM4AO75164 1064 aa12.83□□□□□ -0.36
SMG1-209ENST00000563836 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
SMG1-209ENST00000563836 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
SMG1-209ENST00000563836 MTRQ99707 1265 aa12.83□□□□□ -0.36
SMG1-209ENST00000563836 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
SMG1-209ENST00000563836 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 USP46P62068 366 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
SMG1-209ENST00000563836 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
SMG1-209ENST00000563836 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
SMG1-209ENST00000563836 IL21Q9HBE4 155 aa12.8□□□□□ -0.36
SMG1-209ENST00000563836 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
SMG1-209ENST00000563836 COPS2P61201 443 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 GRIPAP1Q4V328 841 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 MORN1Q5T089 497 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 NUTM1Q86Y26 1132 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
SMG1-209ENST00000563836 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
SMG1-209ENST00000563836 CLIP1P30622 1438 aa12.78□□□□□ -0.36
SMG1-209ENST00000563836 HOXA2O43364 376 aa12.77□□□□□ -0.37
SMG1-209ENST00000563836 KCNC4Q03721 635 aa12.77□□□□□ -0.37
SMG1-209ENST00000563836 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
SMG1-209ENST00000563836 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
SMG1-209ENST00000563836 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
SMG1-209ENST00000563836 NR1I2O75469 434 aa12.75□□□□□ -0.37
SMG1-209ENST00000563836 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
SMG1-209ENST00000563836 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
SMG1-209ENST00000563836 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
SMG1-209ENST00000563836 ZPR1O75312 459 aa12.74□□□□□ -0.37
SMG1-209ENST00000563836 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
SMG1-209ENST00000563836 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
SMG1-209ENST00000563836 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
SMG1-209ENST00000563836 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
SMG1-209ENST00000563836 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
SMG1-209ENST00000563836 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
SMG1-209ENST00000563836 HLA-CQ95604 372 aa12.71□□□□□ -0.37
SMG1-209ENST00000563836 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
SMG1-209ENST00000563836 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
SMG1-209ENST00000563836 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
SMG1-209ENST00000563836 THAP11Q96EK4 314 aa12.69□□□□□ -0.38
SMG1-209ENST00000563836 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
SMG1-209ENST00000563836 GJA5P36382 358 aa12.68□□□□□ -0.38
SMG1-209ENST00000563836 GUCA2AQ02747 115 aa12.68□□□□□ -0.38
SMG1-209ENST00000563836 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
SMG1-209ENST00000563836 NDUFV2P19404 249 aa12.67□□□□□ -0.38
SMG1-209ENST00000563836 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
SMG1-209ENST00000563836 SPTLC1O15269 473 aa12.66□□□□□ -0.38
SMG1-209ENST00000563836 TLL1O43897 1013 aa12.66□□□□□ -0.38
SMG1-209ENST00000563836 FDX1P10109 184 aa12.66□□□□□ -0.38
SMG1-209ENST00000563836 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
SMG1-209ENST00000563836 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
SMG1-209ENST00000563836 CHD1O14646 1710 aa12.65□□□□□ -0.38
SMG1-209ENST00000563836 Q3C1V9 767 aa12.65□□□□□ -0.38
SMG1-209ENST00000563836 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
SMG1-209ENST00000563836 PCDHGC3Q9UN70 934 aa12.65□□□□□ -0.38
SMG1-209ENST00000563836 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
SMG1-209ENST00000563836 VPS8Q8N3P4 1428 aa12.64□□□□□ -0.39
SMG1-209ENST00000563836 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
SMG1-209ENST00000563836 ADH1BP00325 375 aa12.64□□□□□ -0.39
SMG1-209ENST00000563836 RNF19BQ6ZMZ0 732 aa12.63□□□□□ -0.39
SMG1-209ENST00000563836 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
SMG1-209ENST00000563836 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
SMG1-209ENST00000563836 SPSB2Q99619 263 aa12.63□□□□□ -0.39
SMG1-209ENST00000563836 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms