RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 TRIM34Q9BYJ4 488 aa6.16□□□□□ -1.42
APAF1-208ENST00000549007 SEPT9Q9UHD8 586 aaPredicted RBP6.16□□□□□ -1.42
APAF1-208ENST00000549007 SULF1Q8IWU6 871 aa6.16□□□□□ -1.42
APAF1-208ENST00000549007 FANCD2Q9BXW9 1451 aa6.16□□□□□ -1.42
APAF1-208ENST00000549007 KIF21AQ7Z4S6 1674 aa6.16□□□□□ -1.42
APAF1-208ENST00000549007 FDX1P10109 184 aa6.16□□□□□ -1.42
APAF1-208ENST00000549007 HOXA2O43364 376 aa6.15□□□□□ -1.42
APAF1-208ENST00000549007 SLC10A3P09131 477 aa6.15□□□□□ -1.42
APAF1-208ENST00000549007 PDS5BQ9NTI5 1447 aa6.15□□□□□ -1.42
APAF1-208ENST00000549007 CFAP70Q5T0N1 1121 aa6.15□□□□□ -1.43
APAF1-208ENST00000549007 KCNK17Q96T54 332 aa6.15□□□□□ -1.43
APAF1-208ENST00000549007 RBM25P49756 843 aaKnown RBP6.15□□□□□ -1.43
APAF1-208ENST00000549007 CFAP99D6REC4 459 aa6.14□□□□□ -1.43
APAF1-208ENST00000549007 POTEB2H3BUK9 544 aa6.14□□□□□ -1.43
APAF1-208ENST00000549007 RGS22Q8NE09 1264 aa6.14□□□□□ -1.43
APAF1-208ENST00000549007 TRIM6-TRIM34B2RNG4 842 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 UCN2Q96RP3 112 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 BCL2L12Q9HB09 334 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 NBPF26B4DH59 902 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 RNF40O75150 1001 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
APAF1-208ENST00000549007 CEP164Q9UPV0 1460 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 PTPREP23469 700 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 ZBTB3Q9H5J0 574 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 NDUFB9Q9Y6M9 179 aa6.13□□□□□ -1.43
APAF1-208ENST00000549007 PPP1R3GB7ZBB8 358 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 PER1O15534 1290 aaPredicted RBP6.12□□□□□ -1.43
APAF1-208ENST00000549007 FUT2Q10981 343 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 PPP4R3BQ5MIZ7 849 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 SWT1Q5T5J6 900 aaKnown RBP6.12□□□□□ -1.43
APAF1-208ENST00000549007 WWC1Q8IX03 1113 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 C6orf229H3BNL8 230 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 PSEN2P49810 448 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 PBXIP1Q96AQ6 731 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 ABCC8Q09428 1581 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 PALM3A6NDB9 673 aaPredicted RBP6.12□□□□□ -1.43
APAF1-208ENST00000549007 PPP1R12CQ9BZL4 782 aa6.12□□□□□ -1.43
APAF1-208ENST00000549007 ACIN1Q9UKV3 1341 aaKnown RBP6.12□□□□□ -1.43
APAF1-208ENST00000549007 PRR7Q8TB68 274 aa6.11□□□□□ -1.43
APAF1-208ENST00000549007 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
APAF1-208ENST00000549007 NR6A1Q15406 480 aa6.11□□□□□ -1.43
APAF1-208ENST00000549007 DOK7Q18PE1 504 aa6.11□□□□□ -1.43
APAF1-208ENST00000549007 TFIP11Q9UBB9 837 aaKnown RBP6.11□□□□□ -1.43
APAF1-208ENST00000549007 AXIN2Q9Y2T1 843 aa6.11□□□□□ -1.43
APAF1-208ENST00000549007 URB2Q14146 1524 aaKnown RBP6.1□□□□□ -1.43
APAF1-208ENST00000549007 GCGRP47871 477 aa6.1□□□□□ -1.43
APAF1-208ENST00000549007 PRDM2Q13029 1718 aa6.1□□□□□ -1.43
APAF1-208ENST00000549007 PACS2Q86VP3 889 aa6.1□□□□□ -1.43
APAF1-208ENST00000549007 MRC2Q9UBG0 1479 aa6.1□□□□□ -1.43
APAF1-208ENST00000549007 THOC2Q8NI27 1593 aaKnown RBP6.09□□□□□ -1.43
APAF1-208ENST00000549007 MTMR2Q13614 643 aa6.09□□□□□ -1.43
APAF1-208ENST00000549007 PUS10Q3MIT2 529 aaKnown RBP6.09□□□□□ -1.43
APAF1-208ENST00000549007 PPP1R15AO75807 674 aaPredicted RBP6.09□□□□□ -1.43
APAF1-208ENST00000549007 PRM3Q9NNZ6 103 aa6.09□□□□□ -1.43
APAF1-208ENST00000549007 SRPK2P78362 688 aaKnown RBP6.08□□□□□ -1.44
APAF1-208ENST00000549007 IVNS1ABPQ9Y6Y0 642 aa6.08□□□□□ -1.44
APAF1-208ENST00000549007 TUSC1Q2TAM9 212 aa6.08□□□□□ -1.44
APAF1-208ENST00000549007 HELBQ8NG08 1087 aaPredicted RBP6.08□□□□□ -1.44
APAF1-208ENST00000549007 PIK3CDO00329 1044 aa6.08□□□□□ -1.44
APAF1-208ENST00000549007 RIMBP2O15034 1052 aa6.08□□□□□ -1.44
APAF1-208ENST00000549007 TBC1D9Q6ZT07 1266 aa6.08□□□□□ -1.44
APAF1-208ENST00000549007 CUX1P39880 1505 aa6.07□□□□□ -1.44
APAF1-208ENST00000549007 CSB-PGBD3P0DP91 1061 aa6.07□□□□□ -1.44
APAF1-208ENST00000549007 PRPF38BQ5VTL8 546 aaKnown RBP6.07□□□□□ -1.44
APAF1-208ENST00000549007 TOPBP1Q92547 1522 aa6.07□□□□□ -1.44
APAF1-208ENST00000549007 WRNQ14191 1432 aaPredicted RBP eCLIP6.06□□□□□ -1.44
APAF1-208ENST00000549007 ALG2Q9H553 416 aa6.06□□□□□ -1.44
APAF1-208ENST00000549007 SYNJ1O43426 1573 aa6.06□□□□□ -1.44
APAF1-208ENST00000549007 DEPDC4Q8N2C3 294 aa6.06□□□□□ -1.44
APAF1-208ENST00000549007 WDR62O43379 1518 aa6.06□□□□□ -1.44
APAF1-208ENST00000549007 CFHP08603 1231 aa6.05□□□□□ -1.44
APAF1-208ENST00000549007 SCNN1AP37088 669 aa6.05□□□□□ -1.44
APAF1-208ENST00000549007 SAMD7Q7Z3H4 446 aa6.05□□□□□ -1.44
APAF1-208ENST00000549007 RAD54L2Q9Y4B4 1467 aa6.05□□□□□ -1.44
APAF1-208ENST00000549007 DNMBPQ6XZF7 1577 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 GJA5P36382 358 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 POTEEQ6S8J3 1075 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 STK32AQ8WU08 396 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 ZBED2Q9BTP6 218 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 MAFBQ9Y5Q3 323 aaPredicted RBP6.04□□□□□ -1.44
APAF1-208ENST00000549007 FGD5Q6ZNL6 1462 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 WASHC4Q2M389 1173 aa6.04□□□□□ -1.44
APAF1-208ENST00000549007 TMEM88BA6NKF7 163 aa6.03□□□□□ -1.44
APAF1-208ENST00000549007 DMRTA1Q5VZB9 504 aa6.03□□□□□ -1.44
APAF1-208ENST00000549007 CUX2O14529 1486 aa6.03□□□□□ -1.44
APAF1-208ENST00000549007 POLA1P09884 1462 aaPredicted RBP6.03□□□□□ -1.44
APAF1-208ENST00000549007 BRD1O95696 1058 aa6.02□□□□□ -1.44
APAF1-208ENST00000549007 USP46P62068 366 aa6.02□□□□□ -1.45
APAF1-208ENST00000549007 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
APAF1-208ENST00000549007 RNF19BQ6ZMZ0 732 aa6.02□□□□□ -1.45
APAF1-208ENST00000549007 IGSF3O75054 1194 aa6.02□□□□□ -1.45
APAF1-208ENST00000549007 FBXO45P0C2W1 286 aa6.02□□□□□ -1.45
APAF1-208ENST00000549007 ZSWIM6Q9HCJ5 1215 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 ZNF608Q9ULD9 1512 aaPredicted RBP6.01□□□□□ -1.45
APAF1-208ENST00000549007 VRTNQ9H8Y1 702 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 TOP2BQ02880 1626 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 SOGA1O94964 1423 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 MAP10Q9P2G4 905 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 SLC27A5Q9Y2P5 690 aa6.01□□□□□ -1.45
APAF1-208ENST00000549007 TDRD9Q8NDG6 1382 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms