RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
SCFD1-207ENST00000544052 ITGBL1O95965 494 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-207ENST00000544052 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-207ENST00000544052 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-207ENST00000544052 HOXA2O43364 376 aa6.98□□□□□ -1.29
SCFD1-207ENST00000544052 AP1G2O75843 785 aa6.98□□□□□ -1.29
SCFD1-207ENST00000544052 FAM98CQ17RN3 349 aaKnown RBP6.98□□□□□ -1.29
SCFD1-207ENST00000544052 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-207ENST00000544052 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-207ENST00000544052 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
SCFD1-207ENST00000544052 PCDHGC3Q9UN70 934 aa6.97□□□□□ -1.29
SCFD1-207ENST00000544052 HRCP23327 699 aa6.97□□□□□ -1.29
SCFD1-207ENST00000544052 GJA5P36382 358 aa6.97□□□□□ -1.29
SCFD1-207ENST00000544052 FDX1P10109 184 aa6.96□□□□□ -1.29
SCFD1-207ENST00000544052 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
SCFD1-207ENST00000544052 ZNF330Q9Y3S2 320 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-207ENST00000544052 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
SCFD1-207ENST00000544052 LRCH3Q96II8 777 aa6.95□□□□□ -1.3
SCFD1-207ENST00000544052 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-207ENST00000544052 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
SCFD1-207ENST00000544052 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
SCFD1-207ENST00000544052 PRPF38BQ5VTL8 546 aaKnown RBP6.94□□□□□ -1.3
SCFD1-207ENST00000544052 SAMD7Q7Z3H4 446 aa6.94□□□□□ -1.3
SCFD1-207ENST00000544052 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-207ENST00000544052 ZBTB3Q9H5J0 574 aa6.94□□□□□ -1.3
SCFD1-207ENST00000544052 TSR3Q9UJK0 312 aaKnown RBP6.94□□□□□ -1.3
SCFD1-207ENST00000544052 USP46P62068 366 aa6.94□□□□□ -1.3
SCFD1-207ENST00000544052 FUT2Q10981 343 aa6.94□□□□□ -1.3
SCFD1-207ENST00000544052 ABL2P42684 1182 aa6.93□□□□□ -1.3
SCFD1-207ENST00000544052 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
SCFD1-207ENST00000544052 CTDSPL2Q05D32 466 aa6.93□□□□□ -1.3
SCFD1-207ENST00000544052 HPS5Q9UPZ3 1129 aa6.93□□□□□ -1.3
SCFD1-207ENST00000544052 RNF40O75150 1001 aa6.92□□□□□ -1.3
SCFD1-207ENST00000544052 KCNC4Q03721 635 aa6.92□□□□□ -1.3
SCFD1-207ENST00000544052 TSC1Q92574 1164 aa6.92□□□□□ -1.3
SCFD1-207ENST00000544052 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
SCFD1-207ENST00000544052 HMX1Q9NP08 348 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-207ENST00000544052 CFHP08603 1231 aa6.91□□□□□ -1.3
SCFD1-207ENST00000544052 MTMR2Q13614 643 aa6.91□□□□□ -1.3
SCFD1-207ENST00000544052 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
SCFD1-207ENST00000544052 GJD4Q96KN9 370 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-207ENST00000544052 CFAP99D6REC4 459 aa6.9□□□□□ -1.3
SCFD1-207ENST00000544052 CCDC97Q96F63 343 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-207ENST00000544052 C6orf229H3BNL8 230 aa6.89□□□□□ -1.31
SCFD1-207ENST00000544052 TRIM26Q12899 539 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-207ENST00000544052 SLF2Q8IX21 1173 aa6.89□□□□□ -1.31
SCFD1-207ENST00000544052 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
SCFD1-207ENST00000544052 SERPINA10Q9UK55 444 aa6.89□□□□□ -1.31
SCFD1-207ENST00000544052 SOCS7O14512 581 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 PPP4CP60510 307 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 ATP6V1AP38606 617 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 SLC4A3P48751 1232 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
SCFD1-207ENST00000544052 EPS8L1Q8TE68 723 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
SCFD1-207ENST00000544052 GPR37L1O60883 481 aa6.87□□□□□ -1.31
SCFD1-207ENST00000544052 IRF5Q13568 498 aa6.87□□□□□ -1.31
SCFD1-207ENST00000544052 PRM3Q9NNZ6 103 aa6.87□□□□□ -1.31
SCFD1-207ENST00000544052 PODXL2Q9NZ53 605 aa6.87□□□□□ -1.31
SCFD1-207ENST00000544052 GRIPAP1Q4V328 841 aa6.86□□□□□ -1.31
SCFD1-207ENST00000544052 HELBQ8NG08 1087 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-207ENST00000544052 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
SCFD1-207ENST00000544052 GLMNQ92990 594 aa6.86□□□□□ -1.31
SCFD1-207ENST00000544052 NDUFB9Q9Y6M9 179 aa6.86□□□□□ -1.31
SCFD1-207ENST00000544052 PER1O15534 1290 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-207ENST00000544052 WWC1Q8IX03 1113 aa6.85□□□□□ -1.31
SCFD1-207ENST00000544052 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
SCFD1-207ENST00000544052 SLC27A5Q9Y2P5 690 aa6.85□□□□□ -1.31
SCFD1-207ENST00000544052 ADAMTS19Q8TE59 1207 aa6.84□□□□□ -1.31
SCFD1-207ENST00000544052 PDIA4P13667 645 aaKnown RBP6.83□□□□□ -1.32
SCFD1-207ENST00000544052 MORN1Q5T089 497 aa6.83□□□□□ -1.32
SCFD1-207ENST00000544052 VAC14Q08AM6 782 aa6.83□□□□□ -1.32
SCFD1-207ENST00000544052 NR6A1Q15406 480 aa6.83□□□□□ -1.32
SCFD1-207ENST00000544052 KMT5BQ4FZB7 885 aa6.83□□□□□ -1.32
SCFD1-207ENST00000544052 TJAP1Q5JTD0 557 aa6.82□□□□□ -1.32
SCFD1-207ENST00000544052 HDGFL1Q5TGJ6 251 aa6.82□□□□□ -1.32
SCFD1-207ENST00000544052 ACTN4O43707 911 aaKnown RBP6.81□□□□□ -1.32
SCFD1-207ENST00000544052 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
SCFD1-207ENST00000544052 IL21Q9HBE4 155 aa6.81□□□□□ -1.32
SCFD1-207ENST00000544052 BLOC1S3Q6QNY0 202 aa6.81□□□□□ -1.32
SCFD1-207ENST00000544052 NECTIN2Q92692 538 aa6.81□□□□□ -1.32
SCFD1-207ENST00000544052 RETREG3Q86VR2 466 aa6.8□□□□□ -1.32
SCFD1-207ENST00000544052 MTRQ99707 1265 aa6.8□□□□□ -1.32
SCFD1-207ENST00000544052 APLP1P51693 650 aa6.79□□□□□ -1.32
SCFD1-207ENST00000544052 WASHC4Q2M389 1173 aa6.79□□□□□ -1.32
SCFD1-207ENST00000544052 Q6ZNB5 142 aa6.79□□□□□ -1.32
SCFD1-207ENST00000544052 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
SCFD1-207ENST00000544052 RFX1P22670 979 aa6.78□□□□□ -1.32
SCFD1-207ENST00000544052 RETREG2Q8NC44 543 aa6.78□□□□□ -1.32
SCFD1-207ENST00000544052 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
SCFD1-207ENST00000544052 Q3C1V9 767 aa6.77□□□□□ -1.33
SCFD1-207ENST00000544052 ALG2Q9H553 416 aa6.77□□□□□ -1.33
SCFD1-207ENST00000544052 DESI1Q6ICB0 168 aa6.76□□□□□ -1.33
SCFD1-207ENST00000544052 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
SCFD1-207ENST00000544052 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
SCFD1-207ENST00000544052 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
SCFD1-207ENST00000544052 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-207ENST00000544052 CFAP70Q5T0N1 1121 aa6.75□□□□□ -1.33
SCFD1-207ENST00000544052 PPP1R18Q6NYC8 613 aa6.75□□□□□ -1.33
SCFD1-207ENST00000544052 ZNF516Q92618 1163 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms