RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 ABL2P42684 1182 aa11.9□□□□□ -0.5
SMCO2-206ENST00000543991 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
SMCO2-206ENST00000543991 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
SMCO2-206ENST00000543991 RNF40O75150 1001 aa11.89□□□□□ -0.51
SMCO2-206ENST00000543991 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
SMCO2-206ENST00000543991 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
SMCO2-206ENST00000543991 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
SMCO2-206ENST00000543991 KMT5BQ4FZB7 885 aa11.88□□□□□ -0.51
SMCO2-206ENST00000543991 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
SMCO2-206ENST00000543991 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
SMCO2-206ENST00000543991 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
SMCO2-206ENST00000543991 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
SMCO2-206ENST00000543991 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
SMCO2-206ENST00000543991 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
SMCO2-206ENST00000543991 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
SMCO2-206ENST00000543991 POTEB3A0JP26 581 aa11.84□□□□□ -0.51
SMCO2-206ENST00000543991 POTEBQ6S5H4 581 aa11.84□□□□□ -0.51
SMCO2-206ENST00000543991 TSC1Q92574 1164 aa11.84□□□□□ -0.51
SMCO2-206ENST00000543991 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
SMCO2-206ENST00000543991 LSM11P83369 360 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMCO2-206ENST00000543991 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
SMCO2-206ENST00000543991 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
SMCO2-206ENST00000543991 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
SMCO2-206ENST00000543991 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
SMCO2-206ENST00000543991 MORN1Q5T089 497 aa11.82□□□□□ -0.52
SMCO2-206ENST00000543991 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
SMCO2-206ENST00000543991 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
SMCO2-206ENST00000543991 PRR7Q8TB68 274 aa11.81□□□□□ -0.52
SMCO2-206ENST00000543991 SYMPKQ92797 1274 aaKnown RBP11.81□□□□□ -0.52
SMCO2-206ENST00000543991 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
SMCO2-206ENST00000543991 POM121CA8CG34 1229 aa11.8□□□□□ -0.52
SMCO2-206ENST00000543991 IRF5Q13568 498 aa11.8□□□□□ -0.52
SMCO2-206ENST00000543991 Q3C1V9 767 aa11.8□□□□□ -0.52
SMCO2-206ENST00000543991 CALR3Q96L12 384 aaKnown RBP11.8□□□□□ -0.52
SMCO2-206ENST00000543991 HRO43593 1189 aa11.79□□□□□ -0.52
SMCO2-206ENST00000543991 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
SMCO2-206ENST00000543991 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
SMCO2-206ENST00000543991 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
SMCO2-206ENST00000543991 GLMNQ92990 594 aa11.78□□□□□ -0.52
SMCO2-206ENST00000543991 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
SMCO2-206ENST00000543991 ANKK1Q8NFD2 765 aa11.77□□□□□ -0.53
SMCO2-206ENST00000543991 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
SMCO2-206ENST00000543991 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
SMCO2-206ENST00000543991 GPR37L1O60883 481 aa11.76□□□□□ -0.53
SMCO2-206ENST00000543991 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
SMCO2-206ENST00000543991 DESI1Q6ICB0 168 aa11.76□□□□□ -0.53
SMCO2-206ENST00000543991 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
SMCO2-206ENST00000543991 PPP4CP60510 307 aa11.74□□□□□ -0.53
SMCO2-206ENST00000543991 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
SMCO2-206ENST00000543991 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
SMCO2-206ENST00000543991 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
SMCO2-206ENST00000543991 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
SMCO2-206ENST00000543991 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
SMCO2-206ENST00000543991 NR6A1Q15406 480 aa11.71□□□□□ -0.53
SMCO2-206ENST00000543991 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
SMCO2-206ENST00000543991 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.53
SMCO2-206ENST00000543991 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
SMCO2-206ENST00000543991 LYPD8Q6UX82 237 aa11.7□□□□□ -0.54
SMCO2-206ENST00000543991 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
SMCO2-206ENST00000543991 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
SMCO2-206ENST00000543991 BCAMP50895 628 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 APLP1P51693 650 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
SMCO2-206ENST00000543991 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
SMCO2-206ENST00000543991 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
SMCO2-206ENST00000543991 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
SMCO2-206ENST00000543991 NR1I2O75469 434 aa11.67□□□□□ -0.54
SMCO2-206ENST00000543991 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
SMCO2-206ENST00000543991 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
SMCO2-206ENST00000543991 WNT2BQ93097 391 aa11.67□□□□□ -0.54
SMCO2-206ENST00000543991 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
SMCO2-206ENST00000543991 FMNL1O95466 1100 aaPredicted RBP11.66□□□□□ -0.54
SMCO2-206ENST00000543991 ALG2Q9H553 416 aa11.66□□□□□ -0.54
SMCO2-206ENST00000543991 SOX11P35716 441 aa11.65□□□□□ -0.54
SMCO2-206ENST00000543991 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
SMCO2-206ENST00000543991 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
SMCO2-206ENST00000543991 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
SMCO2-206ENST00000543991 JUNDP17535 347 aa11.61□□□□□ -0.55
SMCO2-206ENST00000543991 PTPRNQ16849 979 aa11.6□□□□□ -0.55
SMCO2-206ENST00000543991 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
SMCO2-206ENST00000543991 PPP1R12CQ9BZL4 782 aa11.6□□□□□ -0.55
SMCO2-206ENST00000543991 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
SMCO2-206ENST00000543991 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
SMCO2-206ENST00000543991 SEMA3FQ13275 785 aa11.59□□□□□ -0.55
SMCO2-206ENST00000543991 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
SMCO2-206ENST00000543991 PBXIP1Q96AQ6 731 aa11.59□□□□□ -0.55
SMCO2-206ENST00000543991 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
SMCO2-206ENST00000543991 EIF4G2P78344 907 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMCO2-206ENST00000543991 NR1H3Q13133 447 aa11.58□□□□□ -0.56
SMCO2-206ENST00000543991 FKBPLQ9UIM3 349 aa11.58□□□□□ -0.56
SMCO2-206ENST00000543991 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
SMCO2-206ENST00000543991 RFX1P22670 979 aa11.56□□□□□ -0.56
SMCO2-206ENST00000543991 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
SMCO2-206ENST00000543991 PALM3A6NDB9 673 aaPredicted RBP11.55□□□□□ -0.56
SMCO2-206ENST00000543991 UCN2Q96RP3 112 aa11.55□□□□□ -0.56
SMCO2-206ENST00000543991 MAP10Q9P2G4 905 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms