RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 MYOM2P54296 1465 aa17.6■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 DCCP43146 1447 aa17.59■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 FNBP4Q8N3X1 1017 aaPredicted RBP17.59■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 PPLO60437 1756 aa17.58■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 BCANQ96GW7 911 aa17.58■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 ZFYVE9O95405 1425 aa17.57■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 MST1RQ04912 1400 aa17.57■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 PSDA5PKW4 1024 aaPredicted RBP17.57■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 LAMC1P11047 1609 aa17.54■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 NRXN1Q9ULB1 1477 aa17.54■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 KIAA1210Q9ULL0 1709 aa17.53■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 RALGAPBQ86X10 1494 aa17.53■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 DDX17Q92841 729 aaKnown RBP17.52■□□□□ 0.4
CACNA1C-IT3-201ENST00000542680 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 ADAMTS13Q76LX8 1427 aa17.51■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 GLI3P10071 1580 aa17.49■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 NBPF8Q3BBV2 869 aa17.46■□□□□ 0.39
CACNA1C-IT3-201ENST00000542680 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 XRN1Q8IZH2 1706 aaKnown RBP17.45■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 PTPRUQ92729 1446 aa17.45■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
CACNA1C-IT3-201ENST00000542680 R3HDM1Q15032 1099 aaKnown RBP17.39■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 UTRNP46939 3433 aa17.39■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 BAG6P46379 1132 aa17.36■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 CARD11Q9BXL7 1154 aa17.34■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 SLIT2O94813 1529 aa17.33■□□□□ 0.37
CACNA1C-IT3-201ENST00000542680 USP47Q96K76 1375 aa17.33■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 CAMTA1Q9Y6Y1 1673 aa17.32■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 SEPT12Q8IYM1 358 aa17.32■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 TNS1Q9HBL0 1735 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 EN1Q05925 392 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 KRT27Q7Z3Y8 459 aa17.28■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
CACNA1C-IT3-201ENST00000542680 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 ARHGEF28Q8N1W1 1705 aaKnown RBP17.25■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 PXDNQ92626 1479 aa17.24■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 TECPR2O15040 1411 aa17.23■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 PLCH1Q4KWH8 1693 aa17.23■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 USP32Q8NFA0 1604 aa17.22■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 CHD4Q14839 1912 aa17.22■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 ABCC11Q96J66 1382 aa17.21■□□□□ 0.35
CACNA1C-IT3-201ENST00000542680 RREB1Q92766 1687 aa17.2■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 METP08581 1390 aa17.19■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 VPS72Q15906 364 aa17.19■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms