RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PLEKHG1Q9ULL1 1385 aa19.43■□□□□ 0.7
CDCA3-207ENST00000538862 IQSEC2Q5JU85 1478 aa19.43■□□□□ 0.7
CDCA3-207ENST00000538862 HDGFP51858 240 aaKnown RBP19.42■□□□□ 0.7
CDCA3-207ENST00000538862 STAC3Q96MF2 364 aa19.42■□□□□ 0.7
CDCA3-207ENST00000538862 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.41■□□□□ 0.7
CDCA3-207ENST00000538862 CCDC136Q96JN2 1154 aa19.41■□□□□ 0.7
CDCA3-207ENST00000538862 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
CDCA3-207ENST00000538862 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
CDCA3-207ENST00000538862 PANK3Q9H999 370 aa19.38■□□□□ 0.69
CDCA3-207ENST00000538862 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
CDCA3-207ENST00000538862 ADAMTS13Q76LX8 1427 aa19.37■□□□□ 0.69
CDCA3-207ENST00000538862 XIRP1Q702N8 1843 aaKnown RBP19.36■□□□□ 0.69
CDCA3-207ENST00000538862 RBM33Q96EV2 1170 aaKnown RBP19.36■□□□□ 0.69
CDCA3-207ENST00000538862 KCNA6P17658 529 aa19.35■□□□□ 0.69
CDCA3-207ENST00000538862 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
CDCA3-207ENST00000538862 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
CDCA3-207ENST00000538862 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
CDCA3-207ENST00000538862 CHD2O14647 1828 aaKnown RBP19.34■□□□□ 0.69
CDCA3-207ENST00000538862 RCAN3Q9UKA8 241 aa19.33■□□□□ 0.69
CDCA3-207ENST00000538862 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
CDCA3-207ENST00000538862 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
CDCA3-207ENST00000538862 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
CDCA3-207ENST00000538862 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
CDCA3-207ENST00000538862 PIP4K2BP78356 416 aa19.31■□□□□ 0.68
CDCA3-207ENST00000538862 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
CDCA3-207ENST00000538862 PPLO60437 1756 aa19.31■□□□□ 0.68
CDCA3-207ENST00000538862 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
CDCA3-207ENST00000538862 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
CDCA3-207ENST00000538862 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
CDCA3-207ENST00000538862 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
CDCA3-207ENST00000538862 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
CDCA3-207ENST00000538862 TOM1O60784 492 aa19.27■□□□□ 0.68
CDCA3-207ENST00000538862 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
CDCA3-207ENST00000538862 PTPRUQ92729 1446 aa19.27■□□□□ 0.68
CDCA3-207ENST00000538862 NKTRP30414 1462 aaKnown RBP19.27■□□□□ 0.68
CDCA3-207ENST00000538862 METP08581 1390 aa19.25■□□□□ 0.67
CDCA3-207ENST00000538862 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
CDCA3-207ENST00000538862 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
CDCA3-207ENST00000538862 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
CDCA3-207ENST00000538862 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
CDCA3-207ENST00000538862 AMOTL2Q9Y2J4 779 aa19.24■□□□□ 0.67
CDCA3-207ENST00000538862 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
CDCA3-207ENST00000538862 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
CDCA3-207ENST00000538862 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
CDCA3-207ENST00000538862 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
CDCA3-207ENST00000538862 EXOC6Q8TAG9 804 aa19.23■□□□□ 0.67
CDCA3-207ENST00000538862 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
CDCA3-207ENST00000538862 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
CDCA3-207ENST00000538862 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
CDCA3-207ENST00000538862 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
CDCA3-207ENST00000538862 AMER1Q5JTC6 1135 aaPredicted RBP19.21■□□□□ 0.67
CDCA3-207ENST00000538862 XRN1Q8IZH2 1706 aaKnown RBP19.21■□□□□ 0.66
CDCA3-207ENST00000538862 PPP2R1AP30153 589 aa19.19■□□□□ 0.66
CDCA3-207ENST00000538862 ASXL1Q8IXJ9 1541 aa19.19■□□□□ 0.66
CDCA3-207ENST00000538862 C14orf37Q86TY3 774 aa19.18■□□□□ 0.66
CDCA3-207ENST00000538862 MYOM2P54296 1465 aa19.18■□□□□ 0.66
CDCA3-207ENST00000538862 TCERG1O14776 1098 aaKnown RBP19.17■□□□□ 0.66
CDCA3-207ENST00000538862 ADAMTS8Q9UP79 889 aa19.17■□□□□ 0.66
CDCA3-207ENST00000538862 MYOM1P52179 1685 aa19.17■□□□□ 0.66
CDCA3-207ENST00000538862 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
CDCA3-207ENST00000538862 HSPA1LP34931 641 aa19.17■□□□□ 0.66
CDCA3-207ENST00000538862 MSH6P52701 1360 aa19.16■□□□□ 0.66
CDCA3-207ENST00000538862 NOP58Q9Y2X3 529 aaKnown RBP19.16■□□□□ 0.66
CDCA3-207ENST00000538862 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
CDCA3-207ENST00000538862 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDCA3-207ENST00000538862 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.13■□□□□ 0.65
CDCA3-207ENST00000538862 IPO9Q96P70 1041 aaKnown RBP19.12■□□□□ 0.65
CDCA3-207ENST00000538862 MS4A1P11836 297 aa19.12■□□□□ 0.65
CDCA3-207ENST00000538862 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
CDCA3-207ENST00000538862 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
CDCA3-207ENST00000538862 ROBO2Q9HCK4 1378 aa19.1■□□□□ 0.65
CDCA3-207ENST00000538862 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
CDCA3-207ENST00000538862 ROBO1Q9Y6N7 1651 aa19.1■□□□□ 0.65
CDCA3-207ENST00000538862 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
CDCA3-207ENST00000538862 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
CDCA3-207ENST00000538862 STK26Q9P289 416 aa19.09■□□□□ 0.65
CDCA3-207ENST00000538862 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
CDCA3-207ENST00000538862 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.65
CDCA3-207ENST00000538862 SLAIN2Q9P270 581 aa19.08■□□□□ 0.65
CDCA3-207ENST00000538862 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
CDCA3-207ENST00000538862 DUSP27Q5VZP5 1158 aa19.08■□□□□ 0.64
CDCA3-207ENST00000538862 SBNO2Q9Y2G9 1366 aa19.07■□□□□ 0.64
CDCA3-207ENST00000538862 PLIN1O60240 522 aa19.07■□□□□ 0.64
CDCA3-207ENST00000538862 GOLGA2Q08379 1002 aa19.07■□□□□ 0.64
CDCA3-207ENST00000538862 ATF3P18847 181 aa19.06■□□□□ 0.64
CDCA3-207ENST00000538862 CRBNQ96SW2 442 aa19.06■□□□□ 0.64
CDCA3-207ENST00000538862 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
CDCA3-207ENST00000538862 FAM135BQ49AJ0 1406 aa19.06■□□□□ 0.64
CDCA3-207ENST00000538862 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
CDCA3-207ENST00000538862 C14orf93Q9H972 538 aaKnown RBP19.04■□□□□ 0.64
CDCA3-207ENST00000538862 ADGRL3Q9HAR2 1447 aa19.04■□□□□ 0.64
CDCA3-207ENST00000538862 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
CDCA3-207ENST00000538862 PDE4AP27815 886 aa19.04■□□□□ 0.64
CDCA3-207ENST00000538862 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
CDCA3-207ENST00000538862 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
CDCA3-207ENST00000538862 BACH2Q9BYV9 841 aa19.03■□□□□ 0.64
CDCA3-207ENST00000538862 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
CDCA3-207ENST00000538862 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.63
CDCA3-207ENST00000538862 SLFN5Q08AF3 891 aa19.02■□□□□ 0.63
CDCA3-207ENST00000538862 WAPLQ7Z5K2 1190 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms