RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 TESK2Q96S53 571 aa30.2■■■□□ 2.43
NKX6-3-202ENST00000524115 HSPA1LP34931 641 aa30.2■■■□□ 2.42
NKX6-3-202ENST00000524115 NKTRP30414 1462 aaKnown RBP30.19■■■□□ 2.42
NKX6-3-202ENST00000524115 NWD1Q149M9 1564 aa30.18■■■□□ 2.42
NKX6-3-202ENST00000524115 PIK3R4Q99570 1358 aa30.17■■■□□ 2.42
NKX6-3-202ENST00000524115 SLC24A1O60721 1099 aa30.17■■■□□ 2.42
NKX6-3-202ENST00000524115 CDCA8Q53HL2 280 aa30.17■■■□□ 2.42
NKX6-3-202ENST00000524115 PER1O15534 1290 aaPredicted RBP30.15■■■□□ 2.42
NKX6-3-202ENST00000524115 RNF123Q5XPI4 1314 aa30.15■■■□□ 2.42
NKX6-3-202ENST00000524115 DIP2AQ14689 1571 aa30.14■■■□□ 2.42
NKX6-3-202ENST00000524115 KIAA1210Q9ULL0 1709 aa30.13■■■□□ 2.41
NKX6-3-202ENST00000524115 RPGRIP1LQ68CZ1 1315 aa30.13■■■□□ 2.41
NKX6-3-202ENST00000524115 VGFO15240 615 aaPredicted RBP30.13■■■□□ 2.41
NKX6-3-202ENST00000524115 AMOTL2Q9Y2J4 779 aa30.13■■■□□ 2.41
NKX6-3-202ENST00000524115 NEXMIFQ5QGS0 1516 aa30.13■■■□□ 2.41
NKX6-3-202ENST00000524115 DISP3Q9P2K9 1392 aa30.11■■■□□ 2.41
NKX6-3-202ENST00000524115 IRX6P78412 446 aaPredicted RBP30.11■■■□□ 2.41
NKX6-3-202ENST00000524115 PDE3BQ13370 1112 aa30.11■■■□□ 2.41
NKX6-3-202ENST00000524115 RBM19Q9Y4C8 960 aaKnown RBP30.1■■■□□ 2.41
NKX6-3-202ENST00000524115 PTPRUQ92729 1446 aa30.1■■■□□ 2.41
NKX6-3-202ENST00000524115 SETBP1Q9Y6X0 1596 aa30.1■■■□□ 2.41
NKX6-3-202ENST00000524115 EIF3AQ14152 1382 aaKnown RBP30.09■■■□□ 2.41
NKX6-3-202ENST00000524115 XIRP1Q702N8 1843 aaKnown RBP30.08■■■□□ 2.41
NKX6-3-202ENST00000524115 METP08581 1390 aa30.08■■■□□ 2.41
NKX6-3-202ENST00000524115 MSH6P52701 1360 aa30.08■■■□□ 2.41
NKX6-3-202ENST00000524115 CNGB1Q14028 1251 aaPredicted RBP30.07■■■□□ 2.41
NKX6-3-202ENST00000524115 CHD2O14647 1828 aaKnown RBP30.07■■■□□ 2.4
NKX6-3-202ENST00000524115 KIF1BO60333 1816 aa30.06■■■□□ 2.4
NKX6-3-202ENST00000524115 NCOA3Q9Y6Q9 1424 aa30.05■■■□□ 2.4
NKX6-3-202ENST00000524115 NRXN3Q9Y4C0 1643 aa30.05■■■□□ 2.4
NKX6-3-202ENST00000524115 C14orf37Q86TY3 774 aa30.04■■■□□ 2.4
NKX6-3-202ENST00000524115 MYOM2P54296 1465 aa30.04■■■□□ 2.4
NKX6-3-202ENST00000524115 PANK3Q9H999 370 aa30.02■■■□□ 2.4
NKX6-3-202ENST00000524115 FAM135BQ49AJ0 1406 aa30.01■■■□□ 2.4
NKX6-3-202ENST00000524115 SLAIN2Q9P270 581 aa30.01■■■□□ 2.39
NKX6-3-202ENST00000524115 C19orf44Q9H6X5 657 aa30■■■□□ 2.39
NKX6-3-202ENST00000524115 ADGRF5Q8IZF2 1346 aa29.96■■■□□ 2.39
NKX6-3-202ENST00000524115 CADPS2Q86UW7 1296 aa29.94■■■□□ 2.38
NKX6-3-202ENST00000524115 NPC1L1Q9UHC9 1359 aa29.93■■■□□ 2.38
NKX6-3-202ENST00000524115 BLMP54132 1417 aaPredicted RBP29.93■■■□□ 2.38
NKX6-3-202ENST00000524115 ATF3P18847 181 aa29.93■■■□□ 2.38
NKX6-3-202ENST00000524115 KNSTRNQ9Y448 316 aa29.91■■■□□ 2.38
NKX6-3-202ENST00000524115 FANCIQ9NVI1 1328 aa29.9■■■□□ 2.38
NKX6-3-202ENST00000524115 XRN1Q8IZH2 1706 aaKnown RBP29.89■■■□□ 2.38
NKX6-3-202ENST00000524115 CC2D1BQ5T0F9 858 aaKnown RBP29.88■■■□□ 2.37
NKX6-3-202ENST00000524115 PPLO60437 1756 aa29.86■■■□□ 2.37
NKX6-3-202ENST00000524115 NRXN1Q9ULB1 1477 aa29.86■■■□□ 2.37
NKX6-3-202ENST00000524115 B4GALNT3Q6L9W6 998 aa29.85■■■□□ 2.37
NKX6-3-202ENST00000524115 IFT172Q9UG01 1749 aa29.85■■■□□ 2.37
NKX6-3-202ENST00000524115 ANP32EQ9BTT0 268 aa29.85■■■□□ 2.37
NKX6-3-202ENST00000524115 ASXL1Q8IXJ9 1541 aa29.84■■■□□ 2.37
NKX6-3-202ENST00000524115 ROBO2Q9HCK4 1378 aa29.83■■■□□ 2.37
NKX6-3-202ENST00000524115 ROBO1Q9Y6N7 1651 aa29.82■■■□□ 2.36
NKX6-3-202ENST00000524115 SBNO2Q9Y2G9 1366 aa29.81■■■□□ 2.36
NKX6-3-202ENST00000524115 DCCP43146 1447 aa29.8■■■□□ 2.36
NKX6-3-202ENST00000524115 PTCH1Q13635 1447 aa29.8■■■□□ 2.36
NKX6-3-202ENST00000524115 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.8■■■□□ 2.36
NKX6-3-202ENST00000524115 CCDC136Q96JN2 1154 aa29.8■■■□□ 2.36
NKX6-3-202ENST00000524115 PIK3C2GO75747 1445 aa29.8■■■□□ 2.36
NKX6-3-202ENST00000524115 RCAN3Q9UKA8 241 aa29.79■■■□□ 2.36
NKX6-3-202ENST00000524115 ADGRL3Q9HAR2 1447 aa29.78■■■□□ 2.36
NKX6-3-202ENST00000524115 SETD1AO15047 1707 aaKnown RBP29.78■■■□□ 2.36
NKX6-3-202ENST00000524115 RRP1P56182 461 aaKnown RBP29.78■■■□□ 2.36
NKX6-3-202ENST00000524115 TMEM132EQ6IEE7 984 aa29.78■■■□□ 2.36
NKX6-3-202ENST00000524115 ILDR2Q71H61 639 aa29.78■■■□□ 2.36
NKX6-3-202ENST00000524115 AMER1Q5JTC6 1135 aaPredicted RBP29.77■■■□□ 2.36
NKX6-3-202ENST00000524115 STK26Q9P289 416 aa29.76■■■□□ 2.36
NKX6-3-202ENST00000524115 C14orf93Q9H972 538 aaKnown RBP29.76■■■□□ 2.35
NKX6-3-202ENST00000524115 PPP2R1AP30153 589 aa29.75■■■□□ 2.35
NKX6-3-202ENST00000524115 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
NKX6-3-202ENST00000524115 MYOM1P52179 1685 aa29.74■■■□□ 2.35
NKX6-3-202ENST00000524115 MED1Q15648 1581 aaPredicted RBP29.74■■■□□ 2.35
NKX6-3-202ENST00000524115 WDR43Q15061 677 aaKnown RBP eCLIP29.72■■■□□ 2.35
NKX6-3-202ENST00000524115 CFAP70Q5T0N1 1121 aa29.72■■■□□ 2.35
NKX6-3-202ENST00000524115 MST1RQ04912 1400 aa29.72■■■□□ 2.35
NKX6-3-202ENST00000524115 ABCC11Q96J66 1382 aa29.69■■■□□ 2.34
NKX6-3-202ENST00000524115 WAPLQ7Z5K2 1190 aa29.68■■■□□ 2.34
NKX6-3-202ENST00000524115 PHF23Q9BUL5 403 aaPredicted RBP29.66■■■□□ 2.34
NKX6-3-202ENST00000524115 TECPR2O15040 1411 aa29.66■■■□□ 2.34
NKX6-3-202ENST00000524115 NGEFQ8N5V2 710 aa29.65■■■□□ 2.34
NKX6-3-202ENST00000524115 YTHDC2Q9H6S0 1430 aaKnown RBP29.65■■■□□ 2.34
NKX6-3-202ENST00000524115 JCADQ9P266 1359 aa29.64■■■□□ 2.34
NKX6-3-202ENST00000524115 NALCNQ8IZF0 1738 aa29.62■■■□□ 2.33
NKX6-3-202ENST00000524115 ADAMTS8Q9UP79 889 aa29.62■■■□□ 2.33
NKX6-3-202ENST00000524115 CENPJQ9HC77 1338 aaPredicted RBP29.61■■■□□ 2.33
NKX6-3-202ENST00000524115 SIRT1Q96EB6 747 aa29.61■■■□□ 2.33
NKX6-3-202ENST00000524115 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
NKX6-3-202ENST00000524115 PHLPP1O60346 1717 aa29.61■■■□□ 2.33
NKX6-3-202ENST00000524115 PUS7Q96PZ0 661 aaKnown RBP29.6■■■□□ 2.33
NKX6-3-202ENST00000524115 PLEKHH1Q9ULM0 1364 aa29.6■■■□□ 2.33
NKX6-3-202ENST00000524115 AHDC1Q5TGY3 1603 aaPredicted RBP29.59■■■□□ 2.33
NKX6-3-202ENST00000524115 DDX17Q92841 729 aaKnown RBP29.58■■■□□ 2.33
NKX6-3-202ENST00000524115 ORAI2Q96SN7 254 aa29.58■■■□□ 2.33
NKX6-3-202ENST00000524115 COL16A1Q07092 1604 aaPredicted RBP29.58■■■□□ 2.33
NKX6-3-202ENST00000524115 SALL2Q9Y467 1007 aaPredicted RBP29.57■■■□□ 2.32
NKX6-3-202ENST00000524115 CDCA7LQ96GN5 454 aa29.53■■■□□ 2.32
NKX6-3-202ENST00000524115 ADGRB1O14514 1584 aa29.53■■■□□ 2.32
NKX6-3-202ENST00000524115 RGS17Q9UGC6 210 aaPredicted RBP29.53■■■□□ 2.32
NKX6-3-202ENST00000524115 SENP3-EIF4A1A0A087X0R7 540 aa29.52■■■□□ 2.32
NKX6-3-202ENST00000524115 LRRC59Q96AG4 307 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms