RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 KCTD12Q96CX2 325 aaKnown RBP12.83□□□□□ -0.36
UBE2B-204ENST00000504431 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
UBE2B-204ENST00000504431 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
UBE2B-204ENST00000504431 NYAP1Q6ZVC0 841 aa12.82□□□□□ -0.36
UBE2B-204ENST00000504431 HOXA2O43364 376 aa12.81□□□□□ -0.36
UBE2B-204ENST00000504431 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
UBE2B-204ENST00000504431 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
UBE2B-204ENST00000504431 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
UBE2B-204ENST00000504431 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
UBE2B-204ENST00000504431 SPTLC1O15269 473 aa12.8□□□□□ -0.36
UBE2B-204ENST00000504431 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
UBE2B-204ENST00000504431 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
UBE2B-204ENST00000504431 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
UBE2B-204ENST00000504431 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
UBE2B-204ENST00000504431 FUT2Q10981 343 aa12.79□□□□□ -0.36
UBE2B-204ENST00000504431 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
UBE2B-204ENST00000504431 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
UBE2B-204ENST00000504431 CUX1P39880 1505 aa12.78□□□□□ -0.36
UBE2B-204ENST00000504431 FDX1P10109 184 aa12.76□□□□□ -0.37
UBE2B-204ENST00000504431 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
UBE2B-204ENST00000504431 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
UBE2B-204ENST00000504431 PRPF38BQ5VTL8 546 aaKnown RBP12.74□□□□□ -0.37
UBE2B-204ENST00000504431 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE2B-204ENST00000504431 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
UBE2B-204ENST00000504431 NDUFV2P19404 249 aa12.73□□□□□ -0.37
UBE2B-204ENST00000504431 APLP1P51693 650 aa12.73□□□□□ -0.37
UBE2B-204ENST00000504431 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
UBE2B-204ENST00000504431 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
UBE2B-204ENST00000504431 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
UBE2B-204ENST00000504431 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
UBE2B-204ENST00000504431 Q3C1V9 767 aa12.72□□□□□ -0.37
UBE2B-204ENST00000504431 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
UBE2B-204ENST00000504431 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
UBE2B-204ENST00000504431 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
UBE2B-204ENST00000504431 NR1I2O75469 434 aa12.7□□□□□ -0.38
UBE2B-204ENST00000504431 PTPN5P54829 565 aa12.7□□□□□ -0.38
UBE2B-204ENST00000504431 MORN1Q5T089 497 aa12.7□□□□□ -0.38
UBE2B-204ENST00000504431 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
UBE2B-204ENST00000504431 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
UBE2B-204ENST00000504431 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
UBE2B-204ENST00000504431 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
UBE2B-204ENST00000504431 CSPP1Q1MSJ5 1256 aa12.69□□□□□ -0.38
UBE2B-204ENST00000504431 SPNS2Q8IVW8 549 aa12.69□□□□□ -0.38
UBE2B-204ENST00000504431 SOGA1O94964 1423 aa12.69□□□□□ -0.38
UBE2B-204ENST00000504431 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
UBE2B-204ENST00000504431 PPP2R2DQ66LE6 453 aa12.68□□□□□ -0.38
UBE2B-204ENST00000504431 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.383e-7■■■□□ 16
UBE2B-204ENST00000504431 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 MTMR2Q13614 643 aa12.67□□□□□ -0.38
UBE2B-204ENST00000504431 PUS10Q3MIT2 529 aaKnown RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 NUTM2DQ5VT03 806 aaPredicted RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 TDRD9Q8NDG6 1382 aaKnown RBP12.67□□□□□ -0.38
UBE2B-204ENST00000504431 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
UBE2B-204ENST00000504431 LILRB3O75022 631 aa12.66□□□□□ -0.38
UBE2B-204ENST00000504431 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
UBE2B-204ENST00000504431 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
UBE2B-204ENST00000504431 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
UBE2B-204ENST00000504431 HLA-CQ95604 372 aa12.65□□□□□ -0.38
UBE2B-204ENST00000504431 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
UBE2B-204ENST00000504431 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
UBE2B-204ENST00000504431 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
UBE2B-204ENST00000504431 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
UBE2B-204ENST00000504431 SLC27A5Q9Y2P5 690 aa12.64□□□□□ -0.39
UBE2B-204ENST00000504431 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
UBE2B-204ENST00000504431 HRCP23327 699 aa12.63□□□□□ -0.39
UBE2B-204ENST00000504431 RFC5P40937 340 aa12.63□□□□□ -0.39
UBE2B-204ENST00000504431 FLIIQ13045 1269 aa12.63□□□□□ -0.39
UBE2B-204ENST00000504431 QPCTQ16769 361 aa12.63□□□□□ -0.39
UBE2B-204ENST00000504431 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
UBE2B-204ENST00000504431 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
UBE2B-204ENST00000504431 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
UBE2B-204ENST00000504431 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
UBE2B-204ENST00000504431 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
UBE2B-204ENST00000504431 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
UBE2B-204ENST00000504431 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
UBE2B-204ENST00000504431 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
UBE2B-204ENST00000504431 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
UBE2B-204ENST00000504431 COPS2P61201 443 aa12.59□□□□□ -0.39
UBE2B-204ENST00000504431 MTRQ99707 1265 aa12.58□□□□□ -0.4
UBE2B-204ENST00000504431 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
UBE2B-204ENST00000504431 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
UBE2B-204ENST00000504431 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
UBE2B-204ENST00000504431 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
UBE2B-204ENST00000504431 USB1Q9BQ65 265 aaKnown RBP12.56□□□□□ -0.4
UBE2B-204ENST00000504431 APBB1O00213 710 aa12.55□□□□□ -0.4
UBE2B-204ENST00000504431 ZPR1O75312 459 aa12.55□□□□□ -0.4
UBE2B-204ENST00000504431 AP1G2O75843 785 aa12.54□□□□□ -0.4
UBE2B-204ENST00000504431 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
UBE2B-204ENST00000504431 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
UBE2B-204ENST00000504431 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
UBE2B-204ENST00000504431 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
UBE2B-204ENST00000504431 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
UBE2B-204ENST00000504431 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
UBE2B-204ENST00000504431 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
UBE2B-204ENST00000504431 SPSB2Q99619 263 aa12.53□□□□□ -0.4
UBE2B-204ENST00000504431 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
UBE2B-204ENST00000504431 SOCS7O14512 581 aa12.52□□□□□ -0.41
UBE2B-204ENST00000504431 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms