RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TATDN2Q93075 761 aa7.09□□□□□ -1.28
CLIP4-211ENST00000491701 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.09□□□□□ -1.28
CLIP4-211ENST00000491701 FHAD1B1AJZ9 1412 aa7.08□□□□□ -1.28
CLIP4-211ENST00000491701 SNAPC4Q5SXM2 1469 aa7.08□□□□□ -1.28
CLIP4-211ENST00000491701 APLP1P51693 650 aa7.08□□□□□ -1.28
CLIP4-211ENST00000491701 ARID3AQ99856 593 aa7.08□□□□□ -1.28
CLIP4-211ENST00000491701 PNMA3Q9UL41 463 aa7.08□□□□□ -1.28
CLIP4-211ENST00000491701 ARHGAP35Q9NRY4 1499 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 CEP162Q5TB80 1403 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 GNPATO15228 680 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 FECHP22830 423 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 NKX2-3Q8TAU0 364 aa7.07□□□□□ -1.28
CLIP4-211ENST00000491701 NPDC1Q9NQX5 325 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-211ENST00000491701 CCDC9Q9Y3X0 531 aaKnown RBP7.07□□□□□ -1.28
CLIP4-211ENST00000491701 ARAP1Q96P48 1450 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 ZBTB7CA1YPR0 619 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 NBPF26B4DH59 902 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 HIC1Q14526 733 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 CERKQ8TCT0 537 aa7.06□□□□□ -1.28
CLIP4-211ENST00000491701 CEP170Q5SW79 1584 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 RNF40O75150 1001 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 PDZRN3Q9UPQ7 1066 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 CHD1O14646 1710 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 GRIN2AQ12879 1464 aa7.05□□□□□ -1.28
CLIP4-211ENST00000491701 MAGI1Q96QZ7 1491 aaPredicted RBP7.05□□□□□ -1.28
CLIP4-211ENST00000491701 NUP160Q12769 1436 aa7.04□□□□□ -1.28
CLIP4-211ENST00000491701 CTTNBP2Q8WZ74 1663 aa7.04□□□□□ -1.28
CLIP4-211ENST00000491701 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
CLIP4-211ENST00000491701 GPR37O15354 613 aa7.03□□□□□ -1.28
CLIP4-211ENST00000491701 ZMYND10O75800 440 aa7.03□□□□□ -1.28
CLIP4-211ENST00000491701 ARHGEF11O15085 1522 aa7.03□□□□□ -1.28
CLIP4-211ENST00000491701 SYNJ2O15056 1496 aa7.03□□□□□ -1.28
CLIP4-211ENST00000491701 PDIA4P13667 645 aaKnown RBP7.02□□□□□ -1.29
CLIP4-211ENST00000491701 C1orf115Q9H7X2 142 aa7.02□□□□□ -1.29
CLIP4-211ENST00000491701 CLIP1P30622 1438 aa7.02□□□□□ -1.29
CLIP4-211ENST00000491701 SAMD9Q5K651 1589 aa7.02□□□□□ -1.29
CLIP4-211ENST00000491701 COPS2P61201 443 aa7.01□□□□□ -1.29
CLIP4-211ENST00000491701 BARGINQ6ZT62 677 aa7.01□□□□□ -1.29
CLIP4-211ENST00000491701 ZNF775Q96BV0 537 aaPredicted RBP7.01□□□□□ -1.29
CLIP4-211ENST00000491701 DISP1Q96F81 1524 aa7.01□□□□□ -1.29
CLIP4-211ENST00000491701 KIAA0586Q9BVV6 1533 aa7.01□□□□□ -1.29
CLIP4-211ENST00000491701 UGGT2Q9NYU1 1516 aa7□□□□□ -1.29
CLIP4-211ENST00000491701 HDGFP51858 240 aaKnown RBP7□□□□□ -1.29
CLIP4-211ENST00000491701 MAP2K5Q13163 448 aa7□□□□□ -1.29
CLIP4-211ENST00000491701 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
CLIP4-211ENST00000491701 LRRIQ1Q96JM4 1722 aa7□□□□□ -1.29
CLIP4-211ENST00000491701 RBM27Q9P2N5 1060 aaKnown RBP7□□□□□ -1.29
CLIP4-211ENST00000491701 MINK1Q8N4C8 1332 aaPredicted RBP6.99□□□□□ -1.29
CLIP4-211ENST00000491701 IRF6O14896 467 aa6.99□□□□□ -1.29
CLIP4-211ENST00000491701 TRIM67Q6ZTA4 783 aa6.99□□□□□ -1.29
CLIP4-211ENST00000491701 NLRP7Q8WX94 980 aa6.99□□□□□ -1.29
CLIP4-211ENST00000491701 CCDC102AQ96A19 550 aa6.99□□□□□ -1.29
CLIP4-211ENST00000491701 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 CLASP1Q7Z460 1538 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 GGCXP38435 758 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 RBM46Q8TBY0 533 aaKnown RBP6.98□□□□□ -1.29
CLIP4-211ENST00000491701 EMID1Q96A84 441 aaPredicted RBP6.98□□□□□ -1.29
CLIP4-211ENST00000491701 SHROOM2Q13796 1616 aa6.98□□□□□ -1.29
CLIP4-211ENST00000491701 ZPR1O75312 459 aa6.97□□□□□ -1.29
CLIP4-211ENST00000491701 CHMP7Q8WUX9 453 aaPredicted RBP6.97□□□□□ -1.29
CLIP4-211ENST00000491701 AK7Q96M32 723 aa6.97□□□□□ -1.29
CLIP4-211ENST00000491701 TMUB1Q9BVT8 246 aa6.97□□□□□ -1.29
CLIP4-211ENST00000491701 ADGRG1Q9Y653 693 aa6.97□□□□□ -1.29
CLIP4-211ENST00000491701 IQGAP2Q13576 1575 aa6.97□□□□□ -1.29
CLIP4-211ENST00000491701 VPS8Q8N3P4 1428 aa6.96□□□□□ -1.29
CLIP4-211ENST00000491701 OATP04181 439 aa6.96□□□□□ -1.3
CLIP4-211ENST00000491701 CYB5RLQ6IPT4 315 aa6.96□□□□□ -1.3
CLIP4-211ENST00000491701 SLF2Q8IX21 1173 aa6.96□□□□□ -1.3
CLIP4-211ENST00000491701 FHOD3Q2V2M9 1422 aa6.96□□□□□ -1.3
CLIP4-211ENST00000491701 APBB1O00213 710 aa6.95□□□□□ -1.3
CLIP4-211ENST00000491701 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-211ENST00000491701 KANK4Q5T7N3 995 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-211ENST00000491701 NECTIN2Q92692 538 aa6.95□□□□□ -1.3
CLIP4-211ENST00000491701 ARID3CA6NKF2 412 aa6.94□□□□□ -1.3
CLIP4-211ENST00000491701 RNF223E7ERA6 249 aa6.94□□□□□ -1.3
CLIP4-211ENST00000491701 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
CLIP4-211ENST00000491701 GPBP1L1Q9HC44 474 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-211ENST00000491701 EFCAB5A4FU69 1503 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 SLC19A1P41440 591 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 MDM2Q00987 491 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-211ENST00000491701 METTL3Q86U44 580 aaKnown RBP6.93□□□□□ -1.3
CLIP4-211ENST00000491701 KIAA0556O60303 1618 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 POTECB2RU33 542 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 TRIM66O15016 1216 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 MYT1Q01538 1121 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 BLOC1S3Q6QNY0 202 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 PXYLP1Q8TE99 480 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 EYA1Q99502 592 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 PCDHB3Q9Y5E6 796 aa6.93□□□□□ -1.3
CLIP4-211ENST00000491701 TLL1O43897 1013 aa6.92□□□□□ -1.3
CLIP4-211ENST00000491701 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
CLIP4-211ENST00000491701 PHOX2BQ99453 314 aa6.92□□□□□ -1.3
CLIP4-211ENST00000491701 CASKIN1Q8WXD9 1431 aa6.91□□□□□ -1.3
CLIP4-211ENST00000491701 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms