RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PTPN23Q9H3S7 1636 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 NCOA2Q15596 1464 aa6.56□□□□□ -1.36
SMARCC1-206ENST00000485737 SLC4A3P48751 1232 aa6.56□□□□□ -1.36
SMARCC1-206ENST00000485737 EYA1Q99502 592 aa6.56□□□□□ -1.36
SMARCC1-206ENST00000485737 ADGRG1Q9Y653 693 aa6.56□□□□□ -1.36
SMARCC1-206ENST00000485737 ABCA10Q8WWZ4 1543 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 CTTNBP2Q8WZ74 1663 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 FANCIQ9NVI1 1328 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 HECW1Q76N89 1606 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 GNPATO15228 680 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 ERICH6BQ5W0A0 696 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 AKNAQ7Z591 1439 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 SAMD9Q5K651 1589 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 KIF21AQ7Z4S6 1674 aa6.55□□□□□ -1.36
SMARCC1-206ENST00000485737 DNMBPQ6XZF7 1577 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 FMN1Q68DA7 1419 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 ANP32CO43423 234 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 FECHP22830 423 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 DNAJB2P25686 324 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 SLF2Q8IX21 1173 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 ARHGEF11O15085 1522 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 EHBP1L1Q8N3D4 1523 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
SMARCC1-206ENST00000485737 RCCD1A6NED2 376 aa6.53□□□□□ -1.36
SMARCC1-206ENST00000485737 SIN3AQ96ST3 1273 aa6.53□□□□□ -1.36
SMARCC1-206ENST00000485737 TONSLQ96HA7 1378 aa6.53□□□□□ -1.36
SMARCC1-206ENST00000485737 NAIPQ13075 1403 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 FHOD3Q2V2M9 1422 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 GPR37O15354 613 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 OATP04181 439 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 ITGAEP38570 1179 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 BCANQ96GW7 911 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 GRIN2BQ13224 1484 aa6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 TCOF1Q13428 1488 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-206ENST00000485737 MYOM3Q5VTT5 1437 aa6.51□□□□□ -1.37
SMARCC1-206ENST00000485737 ABCA5Q8WWZ7 1642 aa6.51□□□□□ -1.37
SMARCC1-206ENST00000485737 NECTIN2Q92692 538 aa6.51□□□□□ -1.37
SMARCC1-206ENST00000485737 PTPRKQ15262 1439 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 UGGT2Q9NYU1 1516 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 Q6ZNB5 142 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 METTL3Q86U44 580 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 PXYLP1Q8TE99 480 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 TMEM134Q9H6X4 195 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 SUPT6HQ7KZ85 1726 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 CNTLNQ9NXG0 1405 aa6.5□□□□□ -1.37
SMARCC1-206ENST00000485737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-206ENST00000485737 APLP1P51693 650 aa6.49□□□□□ -1.37
SMARCC1-206ENST00000485737 KCNC4Q03721 635 aa6.49□□□□□ -1.37
SMARCC1-206ENST00000485737 NLRP7Q8WX94 980 aa6.49□□□□□ -1.37
SMARCC1-206ENST00000485737 POLA1P09884 1462 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 FANCD2Q9BXW9 1451 aa6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 LRRIQ1Q96JM4 1722 aa6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 LMOD2Q6P5Q4 547 aa6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 TOPBP1Q92547 1522 aa6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
SMARCC1-206ENST00000485737 DENND4BO75064 1496 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-206ENST00000485737 COPS2P61201 443 aa6.47□□□□□ -1.37
SMARCC1-206ENST00000485737 TRIM52Q96A61 297 aa6.47□□□□□ -1.37
SMARCC1-206ENST00000485737 MTRQ99707 1265 aa6.47□□□□□ -1.37
SMARCC1-206ENST00000485737 POLR1AO95602 1720 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-206ENST00000485737 PRR14Q9BWN1 585 aa6.46□□□□□ -1.38
SMARCC1-206ENST00000485737 MTUS2Q5JR59 1369 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 SLC24A1O60721 1099 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 CFHP08603 1231 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 MAP2K5Q13163 448 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 KMT5BQ4FZB7 885 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 RDH13Q8NBN7 331 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 CDK11AQ9UQ88 783 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 WASHC2AQ641Q2 1341 aa6.45□□□□□ -1.38
SMARCC1-206ENST00000485737 MIA2Q96PC5 1412 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 DDX11L8A8MPP1 907 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 TJAP1Q5JTD0 557 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 PHOX2BQ99453 314 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 IL21Q9HBE4 155 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 PCDHB3Q9Y5E6 796 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 TEX14Q8IWB6 1497 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 RAD54L2Q9Y4B4 1467 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 MAGI3Q5TCQ9 1506 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 ZBED9Q6R2W3 1325 aa6.44□□□□□ -1.38
SMARCC1-206ENST00000485737 SLC10A3P09131 477 aa6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 HNRNPUQ00839 825 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 KRI1Q8N9T8 703 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 ZNF516Q92618 1163 aa6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 DAXXQ9UER7 740 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 CCDC7Q96M83 1385 aa6.43□□□□□ -1.38
SMARCC1-206ENST00000485737 RPRD2Q5VT52 1461 aaKnown RBP6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 IRF6O14896 467 aa6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 BLOC1S3Q6QNY0 202 aa6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 CCDC102AQ96A19 550 aa6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 ROCK1Q13464 1354 aa6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 SPATA31E1Q6ZUB1 1445 aa6.42□□□□□ -1.38
SMARCC1-206ENST00000485737 MBD5Q9P267 1494 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms