RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CSPP1Q1MSJ5 1256 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 PNISRQ8TF01 805 aaKnown RBP6.24□□□□□ -1.41
NPHP3-206ENST00000474871 EXOC5O00471 708 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 APPP05067 770 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 POLD1P28340 1107 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 ITGAEP38570 1179 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 CEP170Q5SW79 1584 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 SYNJ2O15056 1496 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 KIF16BQ96L93 1317 aa6.23□□□□□ -1.41
NPHP3-206ENST00000474871 TSGA10IPQ3SY00 556 aa6.23□□□□□ -1.41
NPHP3-206ENST00000474871 RIOK3O14730 519 aaKnown RBP6.23□□□□□ -1.41
NPHP3-206ENST00000474871 IFNLR1Q8IU57 520 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-206ENST00000474871 GPBP1L1Q9HC44 474 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-206ENST00000474871 NUB1Q9Y5A7 615 aa6.23□□□□□ -1.41
NPHP3-206ENST00000474871 KIAA0556O60303 1618 aa6.23□□□□□ -1.41
NPHP3-206ENST00000474871 ERBB4Q15303 1308 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 PROM2Q8N271 834 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 SMC3Q9UQE7 1217 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 MARCH6O60337 910 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 NYAP1Q6ZVC0 841 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 KIAA0586Q9BVV6 1533 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 HECW1Q76N89 1606 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 MSL3Q8N5Y2 521 aaKnown RBP6.22□□□□□ -1.41
NPHP3-206ENST00000474871 IPO9Q96P70 1041 aaKnown RBP6.22□□□□□ -1.41
NPHP3-206ENST00000474871 MAF1Q9H063 256 aa6.22□□□□□ -1.41
NPHP3-206ENST00000474871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.22□□□□□ -1.41
NPHP3-206ENST00000474871 IPO8O15397 1037 aaKnown RBP6.21□□□□□ -1.41
NPHP3-206ENST00000474871 SMARCA5O60264 1052 aaPredicted RBP6.21□□□□□ -1.41
NPHP3-206ENST00000474871 CD151P48509 253 aa6.21□□□□□ -1.41
NPHP3-206ENST00000474871 MICALL1Q8N3F8 863 aa6.21□□□□□ -1.41
NPHP3-206ENST00000474871 PROCA1Q8NCQ7 364 aaPredicted RBP6.21□□□□□ -1.41
NPHP3-206ENST00000474871 RAD50Q92878 1312 aa6.21□□□□□ -1.41
NPHP3-206ENST00000474871 CCER2I3L3R5 266 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 TPD52L2O43399 206 aaKnown RBP6.21□□□□□ -1.42
NPHP3-206ENST00000474871 NUTM2GQ5VZR2 741 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 GET4Q7L5D6 327 aaPredicted RBP6.21□□□□□ -1.42
NPHP3-206ENST00000474871 TPM2P07951 284 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 PPP4CP60510 307 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 HELBQ8NG08 1087 aaPredicted RBP6.21□□□□□ -1.42
NPHP3-206ENST00000474871 KAT6BQ8WYB5 2073 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 KLHL33A6NCF5 533 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 NAT1P18440 290 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 IRF5Q13568 498 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 CASC1Q6TDU7 716 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 IRF2BPLQ9H1B7 796 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 DISP1Q96F81 1524 aa6.21□□□□□ -1.42
NPHP3-206ENST00000474871 ZNF662Q6ZS27 426 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 SPATA32Q96LK8 384 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
NPHP3-206ENST00000474871 CEP83Q9Y592 693 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 LETM1O95202 739 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-206ENST00000474871 NOP2P46087 812 aaKnown RBP6.2□□□□□ -1.42
NPHP3-206ENST00000474871 APLP1P51693 650 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 ARPC5LQ9BPX5 153 aa6.2□□□□□ -1.42
NPHP3-206ENST00000474871 EPB41L2O43491 1005 aaKnown RBP6.2□□□□□ -1.42
NPHP3-206ENST00000474871 CCDC18Q5T9S5 1454 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 NUP160Q12769 1436 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 MCCD1P59942 119 aaPredicted RBP6.19□□□□□ -1.42
NPHP3-206ENST00000474871 GOLIM4O00461 696 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 DHX16O60231 1041 aaKnown RBP6.19□□□□□ -1.42
NPHP3-206ENST00000474871 CCNB3Q8WWL7 1395 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 EHBP1L1Q8N3D4 1523 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 ZNF280DQ6N043 979 aa6.19□□□□□ -1.42
NPHP3-206ENST00000474871 PHLDB1Q86UU1 1377 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 TGFB3P10600 412 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 AEBP1Q8IUX7 1158 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 FEZ2Q9UHY8 353 aaPredicted RBP6.18□□□□□ -1.42
NPHP3-206ENST00000474871 KDM4CQ9H3R0 1056 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 ARHGEF10LQ9HCE6 1279 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 NRBP1Q9UHY1 535 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 RBM5P52756 815 aaKnown RBP eCLIP6.18□□□□□ -1.42
NPHP3-206ENST00000474871 POLA2Q14181 598 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 MAGI3Q5TCQ9 1506 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 CHD1O14646 1710 aa6.18□□□□□ -1.42
NPHP3-206ENST00000474871 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
NPHP3-206ENST00000474871 CAPN15O75808 1086 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
NPHP3-206ENST00000474871 RAPGEF6Q8TEU7 1601 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 ARHGEF11O15085 1522 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 TAF3Q5VWG9 929 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 CEP126Q9P2H0 1117 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-206ENST00000474871 SPDYE4A6NLX3 237 aa6.17□□□□□ -1.42
NPHP3-206ENST00000474871 DNAJC21Q5F1R6 531 aaKnown RBP6.17□□□□□ -1.42
NPHP3-206ENST00000474871 EPRSP07814 1512 aaKnown RBP6.16□□□□□ -1.42
NPHP3-206ENST00000474871 FAM13BQ9NYF5 915 aa6.16□□□□□ -1.42
NPHP3-206ENST00000474871 SWT1Q5T5J6 900 aaKnown RBP6.16□□□□□ -1.42
NPHP3-206ENST00000474871 TMC1Q8TDI8 760 aa6.16□□□□□ -1.42
NPHP3-206ENST00000474871 CHMP7Q8WUX9 453 aaPredicted RBP6.16□□□□□ -1.42
NPHP3-206ENST00000474871 CCDC94Q9BW85 323 aaPredicted RBP6.16□□□□□ -1.42
NPHP3-206ENST00000474871 CCDC172P0C7W6 258 aa6.16□□□□□ -1.42
NPHP3-206ENST00000474871 FAM200BP0CF97 657 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 PAX7P23759 505 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
NPHP3-206ENST00000474871 KCNV1Q6PIU1 500 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 RANBP17Q9H2T7 1088 aaKnown RBP6.15□□□□□ -1.42
NPHP3-206ENST00000474871 ZBTB12Q9Y330 459 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms