RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 TXLNAP40222 546 aa8.89□□□□□ -0.99
PBX1-204ENST00000465089 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
PBX1-204ENST00000465089 SLU7O95391 586 aaKnown RBP8.89□□□□□ -0.99
PBX1-204ENST00000465089 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.88□□□□□ -0.99
PBX1-204ENST00000465089 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 TRIML1Q8N9V2 468 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 CCDC43Q96MW1 224 aaKnown RBP8.88□□□□□ -0.99
PBX1-204ENST00000465089 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 NAA16Q6N069 864 aaPredicted RBP8.88□□□□□ -0.99
PBX1-204ENST00000465089 TRAF1Q13077 416 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 SYCP1Q15431 976 aa8.88□□□□□ -0.99
PBX1-204ENST00000465089 EIF4G1Q04637 1599 aaKnown RBP8.88□□□□□ -0.99
PBX1-204ENST00000465089 HSP90AB3PQ58FF7 597 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 SMC1AQ14683 1233 aaKnown RBP8.87□□□□□ -0.99
PBX1-204ENST00000465089 TRIM29Q14134 588 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 USP37Q86T82 979 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 TAOK3Q9H2K8 898 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 POTEJP0CG39 1038 aa8.87□□□□□ -0.99
PBX1-204ENST00000465089 HNRNPUQ00839 825 aaKnown RBP eCLIP8.87□□□□□ -0.99
PBX1-204ENST00000465089 DDX10Q13206 875 aaKnown RBP8.86□□□□□ -0.99
PBX1-204ENST00000465089 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
PBX1-204ENST00000465089 KAT6BQ8WYB5 2073 aa8.86□□□□□ -0.99
PBX1-204ENST00000465089 RASSF8Q8NHQ8 419 aa8.86□□□□□ -0.99
PBX1-204ENST00000465089 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
PBX1-204ENST00000465089 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
PBX1-204ENST00000465089 KIAA0754O94854 1291 aa8.86□□□□□ -0.99
PBX1-204ENST00000465089 TPD52L1Q16890 204 aaPredicted RBP8.86□□□□□ -0.99
PBX1-204ENST00000465089 CC2D1BQ5T0F9 858 aaKnown RBP8.85□□□□□ -0.99
PBX1-204ENST00000465089 TERF2IPQ9NYB0 399 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 ERICH2A1L162 156 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 KIF5CO60282 957 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 CFAP157Q5JU67 520 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 GOLIM4O00461 696 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 ZKSCAN1P17029 563 aaPredicted RBP8.85□□□□□ -0.99
PBX1-204ENST00000465089 NOC2LQ9Y3T9 749 aaKnown RBP8.85□□□□□ -0.99
PBX1-204ENST00000465089 MICALCLQ6ZW33 695 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 CAMK4Q16566 473 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 CAPZA3Q96KX2 299 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 ZNF428Q96B54 188 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 NASPP49321 788 aaPredicted RBP8.85□□□□□ -0.99
PBX1-204ENST00000465089 CGNL1Q0VF96 1302 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 COG6Q9Y2V7 657 aa8.85□□□□□ -0.99
PBX1-204ENST00000465089 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 DNAJC21Q5F1R6 531 aaKnown RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 CEP83Q9Y592 693 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 CCDC196A0A1B0GTZ2 297 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 MPHOSPH6Q99547 160 aaKnown RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 SSR1P43307 286 aaKnown RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 SEPT10Q9P0V9 454 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 ZBTB17Q13105 803 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 C6orf163Q5TEZ5 329 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 SART3Q15020 963 aaKnown RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 SH2D4BQ5SQS7 431 aa8.84□□□□□ -0.99
PBX1-204ENST00000465089 STMN4Q9H169 189 aaPredicted RBP8.84□□□□□ -0.99
PBX1-204ENST00000465089 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -1
PBX1-204ENST00000465089 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -1
PBX1-204ENST00000465089 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
PBX1-204ENST00000465089 VPS36Q86VN1 386 aa8.83□□□□□ -1
PBX1-204ENST00000465089 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
PBX1-204ENST00000465089 MAP3K11Q16584 847 aa8.83□□□□□ -1
PBX1-204ENST00000465089 RAB3IL1Q8TBN0 382 aa8.83□□□□□ -1
PBX1-204ENST00000465089 ARHGAP35Q9NRY4 1499 aa8.83□□□□□ -1
PBX1-204ENST00000465089 STK31Q9BXU1 1019 aa8.83□□□□□ -1
PBX1-204ENST00000465089 SEPT6Q14141 434 aa8.83□□□□□ -1
PBX1-204ENST00000465089 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
PBX1-204ENST00000465089 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
PBX1-204ENST00000465089 MAP7Q14244 749 aa8.83□□□□□ -1
PBX1-204ENST00000465089 PPP6R1Q9UPN7 881 aa8.83□□□□□ -1
PBX1-204ENST00000465089 BECN2A8MW95 431 aa8.83□□□□□ -1
PBX1-204ENST00000465089 FAM184AQ8NB25 1140 aa8.83□□□□□ -1
PBX1-204ENST00000465089 CCDC110Q8TBZ0 833 aa8.83□□□□□ -1
PBX1-204ENST00000465089 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
PBX1-204ENST00000465089 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
PBX1-204ENST00000465089 SAFBQ15424 915 aaKnown RBP eCLIP8.83□□□□□ -1
PBX1-204ENST00000465089 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
PBX1-204ENST00000465089 TRIM34Q9BYJ4 488 aa8.82□□□□□ -1
PBX1-204ENST00000465089 MMRN2Q9H8L6 949 aa8.82□□□□□ -1
PBX1-204ENST00000465089 CCDC172P0C7W6 258 aa8.82□□□□□ -1
PBX1-204ENST00000465089 STMN1P16949 149 aa8.82□□□□□ -1
PBX1-204ENST00000465089 GCOM1H8Y6P7 765 aaPredicted RBP8.82□□□□□ -1
PBX1-204ENST00000465089 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
PBX1-204ENST00000465089 MYZAPP0CAP1 466 aa8.82□□□□□ -1
PBX1-204ENST00000465089 EPS15P42566 896 aa8.82□□□□□ -1
PBX1-204ENST00000465089 CCER2I3L3R5 266 aa8.82□□□□□ -1
PBX1-204ENST00000465089 STIM1Q13586 685 aa8.82□□□□□ -1
PBX1-204ENST00000465089 GSE1Q14687 1217 aa8.82□□□□□ -1
PBX1-204ENST00000465089 ABCC9O60706 1549 aa8.81□□□□□ -1
PBX1-204ENST00000465089 PSMA5P28066 241 aa8.81□□□□□ -1
PBX1-204ENST00000465089 STK26Q9P289 416 aa8.81□□□□□ -1
PBX1-204ENST00000465089 CTR9Q6PD62 1173 aa8.81□□□□□ -1
PBX1-204ENST00000465089 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
PBX1-204ENST00000465089 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
PBX1-204ENST00000465089 POTEB2H3BUK9 544 aa8.81□□□□□ -1
PBX1-204ENST00000465089 SEPT7Q16181 437 aaKnown RBP8.81□□□□□ -1
PBX1-204ENST00000465089 PIBF1Q8WXW3 757 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms