RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 ZNF622Q969S3 477 aaKnown RBP eCLIP8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 SEPT11Q9NVA2 429 aaKnown RBP8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 NEFHP12036 1026 aa8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 SYCP1Q15431 976 aa8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 EIF3AQ14152 1382 aaKnown RBP8.55□□□□□ -1.04
CLSTN2-201ENST00000458420 KCNA4P22459 653 aa8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 TTC39AQ5SRH9 613 aa8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 ZNF76P36508 570 aa8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 ZNF408Q9H9D4 720 aa8.54□□□□□ -1.04
CLSTN2-201ENST00000458420 ZPR1O75312 459 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 SETQ01105 290 aaPredicted RBP8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 BICD2Q8TD16 824 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 ANKRD20A12PQ8NF67 263 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 TMOD2Q9NZR1 351 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 SSR1P43307 286 aaKnown RBP8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 SAFBQ15424 915 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 MPHOSPH8Q99549 860 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 SIL1Q9H173 461 aa8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 SART3Q15020 963 aaKnown RBP8.53□□□□□ -1.04
CLSTN2-201ENST00000458420 RBM26Q5T8P6 1007 aaKnown RBP8.52□□□□□ -1.04
CLSTN2-201ENST00000458420 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.04
CLSTN2-201ENST00000458420 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 CUX2O14529 1486 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 PDILTQ8N807 584 aa8.52□□□□□ -1.05
CLSTN2-201ENST00000458420 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 NUP133Q8WUM0 1156 aa8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 CIZ1Q9ULV3 898 aaPredicted RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 SSBP05455 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 SLC3A2P08195 630 aaKnown RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 VPS37CA5D8V6 355 aaPredicted RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 VGFO15240 615 aaPredicted RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 GPRASP1Q5JY77 1395 aa8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 GNL3LQ9NVN8 582 aaKnown RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 RIPK4P57078 832 aa8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 TATP17735 454 aaPredicted RBP8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 CBX1P83916 185 aa8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 PLCD4Q9BRC7 762 aa8.51□□□□□ -1.05
CLSTN2-201ENST00000458420 EVC2Q86UK5 1308 aa8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 PANK3Q9H999 370 aa8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 CARMIL1Q5VZK9 1371 aa8.5□□□□□ -1.05
CLSTN2-201ENST00000458420 CEBPZQ03701 1054 aaKnown RBP8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 MPHOSPH9Q99550 1183 aa8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 ZKSCAN1P17029 563 aaPredicted RBP8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 RUFY1Q96T51 708 aa8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 TMEM132EQ6IEE7 984 aa8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 ZNF526Q8TF50 670 aaPredicted RBP8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 CSPG5O95196 566 aa8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 MAP4K4O95819 1239 aaPredicted RBP8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 RUFY2Q8WXA3 655 aa8.49□□□□□ -1.05
CLSTN2-201ENST00000458420 CAGE1Q8TC20 777 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 RPGRQ92834 1020 aaKnown RBP8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 MPRIPQ6WCQ1 1025 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 C8orf37Q96NL8 207 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 XBP1P17861 261 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 ZNF354CQ86Y25 554 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 HOOK1Q9UJC3 728 aaKnown RBP8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 MTHFSP49914 203 aa8.48□□□□□ -1.05
CLSTN2-201ENST00000458420 CCDC158Q5M9N0 1113 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 SLC26A8Q96RN1 970 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 FEZ1Q99689 392 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 COMMD10Q9Y6G5 202 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 ERC1Q8IUD2 1116 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 PTCD1O75127 700 aaKnown RBP8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 SEPT7Q16181 437 aaKnown RBP8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
CLSTN2-201ENST00000458420 PLS1Q14651 629 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 ABCF2Q9UG63 623 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 ANKRD30AQ9BXX3 1397 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 C6orf229H3BNL8 230 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 MAP7D2Q96T17 732 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 DIAPH1O60610 1272 aaKnown RBP8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 FSD1Q9BTV5 496 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 GOLGA3Q08378 1498 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 PRDM2Q13029 1718 aa8.46□□□□□ -1.05
CLSTN2-201ENST00000458420 CGNL1Q0VF96 1302 aa8.46□□□□□ -1.06
CLSTN2-201ENST00000458420 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
CLSTN2-201ENST00000458420 SMARCA2P51531 1590 aa8.45□□□□□ -1.06
CLSTN2-201ENST00000458420 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
CLSTN2-201ENST00000458420 SOGA1O94964 1423 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms