RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 ZPR1O75312 459 aa10.58□□□□□ -0.72
CHD6-204ENST00000440647 SULF1Q8IWU6 871 aa10.58□□□□□ -0.72
CHD6-204ENST00000440647 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
CHD6-204ENST00000440647 CFHP08603 1231 aa10.57□□□□□ -0.72
CHD6-204ENST00000440647 CUX1P39880 1505 aa10.57□□□□□ -0.72
CHD6-204ENST00000440647 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
CHD6-204ENST00000440647 ACTN4O43707 911 aaKnown RBP10.56□□□□□ -0.72
CHD6-204ENST00000440647 GFRA3O60609 400 aa10.56□□□□□ -0.72
CHD6-204ENST00000440647 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
CHD6-204ENST00000440647 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
CHD6-204ENST00000440647 CYB5RLQ6IPT4 315 aa10.55□□□□□ -0.72
CHD6-204ENST00000440647 PBRM1Q86U86 1689 aa10.54□□□□□ -0.72
CHD6-204ENST00000440647 SYNJ1O43426 1573 aa10.54□□□□□ -0.72
CHD6-204ENST00000440647 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
CHD6-204ENST00000440647 MAGI1Q96QZ7 1491 aaPredicted RBP10.54□□□□□ -0.72
CHD6-204ENST00000440647 CLCN1P35523 988 aa10.53□□□□□ -0.72
CHD6-204ENST00000440647 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
CHD6-204ENST00000440647 GRIN2BQ13224 1484 aa10.53□□□□□ -0.72
CHD6-204ENST00000440647 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
CHD6-204ENST00000440647 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.73
CHD6-204ENST00000440647 AK7Q96M32 723 aa10.52□□□□□ -0.73
CHD6-204ENST00000440647 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
CHD6-204ENST00000440647 GCGRP47871 477 aa10.51□□□□□ -0.73
CHD6-204ENST00000440647 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
CHD6-204ENST00000440647 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
CHD6-204ENST00000440647 CD46P15529 392 aa10.5□□□□□ -0.73
CHD6-204ENST00000440647 AMHR2Q16671 573 aa10.5□□□□□ -0.73
CHD6-204ENST00000440647 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
CHD6-204ENST00000440647 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
CHD6-204ENST00000440647 TRIM66O15016 1216 aa10.49□□□□□ -0.73
CHD6-204ENST00000440647 NR1I2O75469 434 aa10.49□□□□□ -0.73
CHD6-204ENST00000440647 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
CHD6-204ENST00000440647 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
CHD6-204ENST00000440647 SLC24A3Q9HC58 644 aa10.48□□□□□ -0.73
CHD6-204ENST00000440647 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
CHD6-204ENST00000440647 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
CHD6-204ENST00000440647 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
CHD6-204ENST00000440647 ATP6V1AP38606 617 aa10.46□□□□□ -0.73
CHD6-204ENST00000440647 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.74
CHD6-204ENST00000440647 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
CHD6-204ENST00000440647 FUT2Q10981 343 aa10.45□□□□□ -0.74
CHD6-204ENST00000440647 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
CHD6-204ENST00000440647 PUS10Q3MIT2 529 aaKnown RBP10.45□□□□□ -0.74
CHD6-204ENST00000440647 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
CHD6-204ENST00000440647 SLC19A1P41440 591 aa10.44□□□□□ -0.74
CHD6-204ENST00000440647 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
CHD6-204ENST00000440647 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
CHD6-204ENST00000440647 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
CHD6-204ENST00000440647 MORN1Q5T089 497 aa10.43□□□□□ -0.74
CHD6-204ENST00000440647 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
CHD6-204ENST00000440647 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.746e-12■■□□□ 14.4
CHD6-204ENST00000440647 KDM4AO75164 1064 aa10.42□□□□□ -0.74
CHD6-204ENST00000440647 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
CHD6-204ENST00000440647 TOP2BQ02880 1626 aa10.42□□□□□ -0.74
CHD6-204ENST00000440647 ADH1BP00325 375 aa10.41□□□□□ -0.74
CHD6-204ENST00000440647 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
CHD6-204ENST00000440647 PARP9Q8IXQ6 854 aa10.41□□□□□ -0.74
CHD6-204ENST00000440647 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
CHD6-204ENST00000440647 PDE4DQ08499 809 aa10.4□□□□□ -0.74
CHD6-204ENST00000440647 GRIN2AQ12879 1464 aa10.39□□□□□ -0.75
CHD6-204ENST00000440647 USP46P62068 366 aa10.39□□□□□ -0.75
CHD6-204ENST00000440647 TLL1O43897 1013 aa10.38□□□□□ -0.75
CHD6-204ENST00000440647 SLC6A16Q9GZN6 736 aa10.38□□□□□ -0.75
CHD6-204ENST00000440647 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
CHD6-204ENST00000440647 S1PR4O95977 384 aa10.37□□□□□ -0.75
CHD6-204ENST00000440647 ZNF598Q86UK7 904 aaKnown RBP10.37□□□□□ -0.75
CHD6-204ENST00000440647 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
CHD6-204ENST00000440647 SPRYD7Q5W111 196 aa10.36□□□□□ -0.75
CHD6-204ENST00000440647 NUTM1Q86Y26 1132 aa10.36□□□□□ -0.75
CHD6-204ENST00000440647 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
CHD6-204ENST00000440647 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
CHD6-204ENST00000440647 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
CHD6-204ENST00000440647 SPSB2Q99619 263 aa10.35□□□□□ -0.75
CHD6-204ENST00000440647 FHAD1B1AJZ9 1412 aa10.34□□□□□ -0.75
CHD6-204ENST00000440647 HOXA2O43364 376 aa10.34□□□□□ -0.75
CHD6-204ENST00000440647 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
CHD6-204ENST00000440647 MS4A1P11836 297 aa10.34□□□□□ -0.75
CHD6-204ENST00000440647 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
CHD6-204ENST00000440647 NUP160Q12769 1436 aa10.33□□□□□ -0.76
CHD6-204ENST00000440647 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
CHD6-204ENST00000440647 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
CHD6-204ENST00000440647 ERCC6L2Q5T890 1561 aa10.32□□□□□ -0.76
CHD6-204ENST00000440647 Q3C1V9 767 aa10.32□□□□□ -0.76
CHD6-204ENST00000440647 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
CHD6-204ENST00000440647 SHROOM2Q13796 1616 aa10.32□□□□□ -0.76
CHD6-204ENST00000440647 PRR20EP86478 221 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 PRR20CP86479 221 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 PRR20DP86480 221 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 PRR20BP86481 221 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 PRR20AP86496 221 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 HLA-CQ95604 372 aa10.31□□□□□ -0.76
CHD6-204ENST00000440647 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
CHD6-204ENST00000440647 DGAT1O75907 488 aa10.29□□□□□ -0.76
CHD6-204ENST00000440647 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
CHD6-204ENST00000440647 ZNF697Q5TEC3 545 aa10.29□□□□□ -0.76
CHD6-204ENST00000440647 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
CHD6-204ENST00000440647 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
CHD6-204ENST00000440647 FAM160A2Q8N612 972 aaPredicted RBP10.29□□□□□ -0.76
CHD6-204ENST00000440647 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
CHD6-204ENST00000440647 LCE2BO14633 110 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms