RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 RDXP35241 583 aaKnown RBP17.75■□□□□ 0.43
PCNX1-202ENST00000439984 HSP90AB3PQ58FF7 597 aa17.74■□□□□ 0.43
PCNX1-202ENST00000439984 PTPRGP23470 1445 aa17.74■□□□□ 0.43
PCNX1-202ENST00000439984 PANK2Q9BZ23 570 aa17.74■□□□□ 0.43
PCNX1-202ENST00000439984 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
PCNX1-202ENST00000439984 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
PCNX1-202ENST00000439984 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
PCNX1-202ENST00000439984 CLSTN1O94985 981 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 CCDC70Q6NSX1 233 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 KIF3BO15066 747 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 CLCN1P35523 988 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 CDC45O75419 566 aa17.73■□□□□ 0.43
PCNX1-202ENST00000439984 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
PCNX1-202ENST00000439984 CCDC34Q96HJ3 373 aa17.71■□□□□ 0.43
PCNX1-202ENST00000439984 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.43
PCNX1-202ENST00000439984 SYCE3A1L190 88 aa17.71■□□□□ 0.43
PCNX1-202ENST00000439984 ACBD3Q9H3P7 528 aa17.71■□□□□ 0.43
PCNX1-202ENST00000439984 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
PCNX1-202ENST00000439984 RASSF8Q8NHQ8 419 aa17.71■□□□□ 0.42
PCNX1-202ENST00000439984 FIBPO43427 364 aa17.7■□□□□ 0.42
PCNX1-202ENST00000439984 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-202ENST00000439984 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
PCNX1-202ENST00000439984 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-202ENST00000439984 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
PCNX1-202ENST00000439984 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
PCNX1-202ENST00000439984 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-202ENST00000439984 TSR1Q2NL82 804 aaKnown RBP17.7■□□□□ 0.42
PCNX1-202ENST00000439984 AK7Q96M32 723 aa17.69■□□□□ 0.42
PCNX1-202ENST00000439984 TPM1P09493 284 aa17.69■□□□□ 0.42
PCNX1-202ENST00000439984 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
PCNX1-202ENST00000439984 RUFY1Q96T51 708 aa17.69■□□□□ 0.42
PCNX1-202ENST00000439984 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
PCNX1-202ENST00000439984 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
PCNX1-202ENST00000439984 TTLL5Q6EMB2 1281 aa17.68■□□□□ 0.42
PCNX1-202ENST00000439984 PLCD3Q8N3E9 789 aa17.68■□□□□ 0.42
PCNX1-202ENST00000439984 NEK4P51957 841 aa17.68■□□□□ 0.42
PCNX1-202ENST00000439984 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
PCNX1-202ENST00000439984 PDILTQ8N807 584 aa17.68■□□□□ 0.42
PCNX1-202ENST00000439984 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
PCNX1-202ENST00000439984 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
PCNX1-202ENST00000439984 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
PCNX1-202ENST00000439984 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
PCNX1-202ENST00000439984 DEF6Q9H4E7 631 aa17.66■□□□□ 0.42
PCNX1-202ENST00000439984 GPATCH11Q8N954 259 aa17.66■□□□□ 0.42
PCNX1-202ENST00000439984 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
PCNX1-202ENST00000439984 SMC2O95347 1197 aa17.65■□□□□ 0.42
PCNX1-202ENST00000439984 TSPYL1Q9H0U9 437 aa17.65■□□□□ 0.42
PCNX1-202ENST00000439984 RRAGDQ9NQL2 400 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-202ENST00000439984 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
PCNX1-202ENST00000439984 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
PCNX1-202ENST00000439984 CCDC73Q6ZRK6 1079 aa17.64■□□□□ 0.41
PCNX1-202ENST00000439984 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
PCNX1-202ENST00000439984 RABEP1Q15276 862 aa17.64■□□□□ 0.41
PCNX1-202ENST00000439984 NBPF8Q3BBV2 869 aa17.63■□□□□ 0.41
PCNX1-202ENST00000439984 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
PCNX1-202ENST00000439984 ANKRD50Q9ULJ7 1429 aa17.63■□□□□ 0.41
PCNX1-202ENST00000439984 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
PCNX1-202ENST00000439984 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
PCNX1-202ENST00000439984 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
PCNX1-202ENST00000439984 C1orf115Q9H7X2 142 aa17.62■□□□□ 0.41
PCNX1-202ENST00000439984 DYNC1I1O14576 645 aa17.62■□□□□ 0.41
PCNX1-202ENST00000439984 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
PCNX1-202ENST00000439984 IGSF3O75054 1194 aa17.62■□□□□ 0.41
PCNX1-202ENST00000439984 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
PCNX1-202ENST00000439984 NAIPQ13075 1403 aa17.61■□□□□ 0.41
PCNX1-202ENST00000439984 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
PCNX1-202ENST00000439984 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-202ENST00000439984 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-202ENST00000439984 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
PCNX1-202ENST00000439984 MLECQ14165 292 aa17.6■□□□□ 0.41
PCNX1-202ENST00000439984 PCMTD1Q96MG8 357 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-202ENST00000439984 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
PCNX1-202ENST00000439984 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-202ENST00000439984 GTF2F1P35269 517 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■□□□ 14.2
PCNX1-202ENST00000439984 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 RIPK4P57078 832 aa17.59■□□□□ 0.41
PCNX1-202ENST00000439984 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
PCNX1-202ENST00000439984 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 AAMPQ13685 434 aa17.59■□□□□ 0.41
PCNX1-202ENST00000439984 POLR3GO15318 223 aaPredicted RBP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
PCNX1-202ENST00000439984 SUPT6HQ7KZ85 1726 aaKnown RBP17.59■□□□□ 0.41
PCNX1-202ENST00000439984 SDF4Q9BRK5 362 aa17.58■□□□□ 0.41
PCNX1-202ENST00000439984 SSFA2P28290 1259 aa17.58■□□□□ 0.41
PCNX1-202ENST00000439984 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.4
PCNX1-202ENST00000439984 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
PCNX1-202ENST00000439984 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
PCNX1-202ENST00000439984 PDE3AQ14432 1141 aa17.58■□□□□ 0.4
PCNX1-202ENST00000439984 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.4
PCNX1-202ENST00000439984 NAT10Q9H0A0 1025 aaKnown RBP17.57■□□□□ 0.4
PCNX1-202ENST00000439984 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-202ENST00000439984 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
PCNX1-202ENST00000439984 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
PCNX1-202ENST00000439984 ERCC4Q92889 916 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-202ENST00000439984 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
PCNX1-202ENST00000439984 MAP3K1Q13233 1512 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms